CB290581

Overview
NameCB290581
Unique NameCB290581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6287 contig Csv1_Contig6287:1148..1918. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.238e-61
Identity = 108/167 (64.67%), Postives = 133/167 (79.64%), Query Frame = -2
Query:  309 KVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDS---AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEAA 800
            K+C QI LC F+G   VS GI++VV++    + DS    +CS CEM VVW+QNQL+Q QTKE++++YINELCD +P+PMG+S +DC ++ +MP VSFTIG KIF L+PE+YILK GEG    CISGF AFD+PPPRGPLWILGDVFMG YHTVFDFGKLR+G AEAA
Sbjct:  347 KICSQINLCTFDGTRGVSMGIESVVDENAGKSSDSLHDGMCSVCEMTVVWMQNQLRQNQTKERIINYINELCDRMPSPMGQSAVDCGQLSSMPTVSFTIGGKIFDLAPEEYILKVGEGPVAQCISGFTAFDIPPPRGPLWILGDVFMGRYHTVFDFGKLRVGSAEAA 513          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 7.198e-60
Identity = 105/164 (64.02%), Postives = 133/164 (81.10%), Query Frame = -2
Query:  309 KVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEAA 800
            KVC Q+GLC F+G   VS GI++VV+KEN+  G  A+CS CEMAVVW++NQL++ +TKE +L+Y N+LC+ LP+P GES + C +I  MPN++FTI +K F L+PEQYI+K  +G   VCISGFMAFD+PPPRGPLWILGDVFMG YHTVFDFGK RIGFA++A
Sbjct:  335 KVCSQVGLCMFDGKRSVSNGIESVVDKENL--GSDAMCSVCEMAVVWIENQLRENKTKELILNYANQLCERLPSPNGESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGKDRIGFAKSA 496          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.604e-59
Identity = 106/170 (62.35%), Postives = 133/170 (78.24%), Query Frame = -2
Query:  309 KVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDS------AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEAA 800
            K+C Q+GLC F+G   VS GIK+VV+ E   AG+S       +C+ACEMAVVW+QNQL Q +T++ +L+YIN+LCD LP+PMGES +DC  + +MP +SFTIG K F L PE+YILK GEG A  CISGF A D+PPPRGPLWILGDVFMG YHTVFD+GK+R+GFA++A
Sbjct:  343 KICSQVGLCTFDGKHGVSAGIKSVVDDE---AGESNGLQSGPMCNACEMAVVWMQNQLAQNKTQDLILNYINQLCDKLPSPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGAYHTVFDYGKMRVGFAKSA 509          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.572e-59
Identity = 104/167 (62.28%), Postives = 130/167 (77.84%), Query Frame = -2
Query:  309 KVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGD---SAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEAA 800
            K+C Q+GLC F+G   VS GI++VV+ E V +       +CSACEMAVVW+QNQL Q +T++ +L Y+N+LC+ LP+PMGES +DC  + +MP++ FTIG K F L PE+YILK GEG A  CISGF A D+PPPRGPLWILGDVFMG YHTVFD+GKLRIGFA+AA
Sbjct:  342 KICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 508          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 1.113e-52
Identity = 92/165 (55.76%), Postives = 125/165 (75.76%), Query Frame = -2
Query:  309 KVCQQIGLCAFNGAEYVSTGIKTVVEK-ENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEAA 800
            K+C Q+ LC+F+G+   S  I++VV+K +  S+G    C  C   VVW+QNQ++Q +T+E +++Y+++LC+ LP+PMGES +DC  + +MPN++FT+G K F LSPEQY+LK GEG    CISGF A D+ PP GPLWILGDVFMG YHTVFD+G LR+GFAEAA
Sbjct:  309 KICSQMKLCSFDGSHDTSMIIESVVDKSKGKSSGLPMRCVPCARWVVWMQNQIRQNETEENIINYVDKLCERLPSPMGESAVDCSSLSSMPNIAFTVGGKTFNLSPEQYVLKVGEGATAQCISGFTAMDVAPPHGPLWILGDVFMGQYHTVFDYGNLRVGFAEAA 473          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.819e-25
Identity = 47/93 (50.54%), Postives = 69/93 (74.19%), Query Frame = -2
Query:  312 SLPNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEA 590
            ++P   GE +IDC ++PT+P +SF +G K ++L+ EQY+LK  +G   +C+SG M  ++PPP GPLWILGDVF+G Y+TVFD    R+GFA++
Sbjct:  303 AIPLIQGEYMIDCKKVPTLPTISFNVGGKTYSLTGEQYVLKESQGGKTICLSGLMGLEIPPPAGPLWILGDVFIGQYYTVFDRESNRVGFAKS 395          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 9.819e-25
Identity = 57/141 (40.43%), Postives = 89/141 (63.12%), Query Frame = -2
Query:  312 VEKENVSAGDS-AVCSA-CEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEA 728
            +  ++++ GD  ++C+  CE  V    + +     + K L    +   + P   GE +++CD +P++P +SFT+G +++TL+ EQYILK  +    +C+SGFM  D+P P GPLWILGDVFMG Y+TVFD    R+GFA+A
Sbjct:  258 IRVDSMAVGDQLSLCTGGCEAIVDSGTSLITGPSVEVKALQ---KAIGAFPLIQGEYMVNCDTVPSLPVISFTVGGQVYTLTGEQYILKVTQAGKTMCLSGFMGLDIPAPAGPLWILGDVFMGQYYTVFDRDANRVGFAKA 395          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 4.873e-24
Identity = 57/137 (41.61%), Postives = 79/137 (57.66%), Query Frame = -2
Query:  312 ENVSAGDSAVCS-ACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEA 719
            ++V  GD+  C+  CE A+      L      E  ++ IN+     P   GE ++DC  IP +P +SF +G K F L    Y+L+  +    +C+SGFM  D+PPP GPLWILGDVF+G Y+T FD G  R+GFA A
Sbjct:  253 DSVKVGDTEFCNNGCE-AIADTGTSLIAGPVSE--VTAINKAIGGTPIMNGEYMVDCSLIPKLPKISFVLGGKSFDLEGADYVLRVAQMGKTICLSGFMGIDIPPPNGPLWILGDVFIGKYYTEFDMGNDRVGFATA 386          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.418e-23
Identity = 57/141 (40.43%), Postives = 84/141 (59.57%), Query Frame = -2
Query:  309 VEKENVSAGDS-AVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEAA 728
            +    V+ G S  +C     A+V     L   Q +E  +  + +   ++P   GE +I C+++P++P+V+ T+G K + LS E Y LK  +    +C+SGFM  D+PPP GPLWILGDVF+G Y+TVFD    R+G AEAA
Sbjct:  207 IHMNQVAVGSSLTLCKGGCEAIVDTGTSLIVGQPEE--VRELGKAIGAVPLIQGEYMIPCEKVPSLPDVTVTLGGKKYKLSSENYTLKVSQAGQTICLSGFMGMDIPPPGGPLWILGDVFIGRYYTVFDRDLNRVGLAEAA 345          
BLAST of CB290581 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.125e-23
Identity = 48/94 (51.06%), Postives = 66/94 (70.21%), Query Frame = -2
Query:  309 SLPNPMGESIIDCDRIPTMPNVSFTIGDKIFTLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDFGKLRIGFAEAA 590
            ++P   GE +I C+++ T+P ++  +G K + LSPE Y LK  +    +C+SGFM  D+PPP GPLWILGDVF+G Y+TVFD    R+GFAEAA
Sbjct:  317 AVPLIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGFAEAA 410          
The following BLAST results are available for this feature:
BLAST of CB290581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
ASPR_CUCPE2.238e-6164.67Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPRX_ORYSJ7.198e-6064.02Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
ASPR1_ORYSJ1.604e-5962.35Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
ASPR_HORVU3.572e-5962.28Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
CYPR1_CYNCA1.113e-5255.76Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
CATD_CLUHA9.819e-2550.54Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1[more]
CATD_CHIHA9.819e-2540.43Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV... [more]
ASPP_AEDAE4.873e-2441.61Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATD_PIG2.418e-2340.43Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2[more]
CATD_HUMAN4.125e-2351.06Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cd03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290581 ID=CB290581; Name=CB290581; organism=Citrus sinensis; type=EST; length=801bp
TTTTTTTTTTTTTTTTTGAAAAAACGAAGTCCAATGACCGTTATAAGATG
AAATTTCTCCAAATAAGTAAAACTATCACGCCAGAATATCATAAAATTAA
AGTACTTTAAACATAGGATGATAGGATTTTACATAAGTATATATCAGCAT
ATCATCTGTGGGGATGATGAAGATAGTTATGCATAAAAGCATACTGATCG
TTTTACAGTACATGAAAACCATAATCTACATTCTAGAACCCTCCTCCTCA
TATGAGCAGGTGATGATCGCTGCTACTACATAAAAACTTGACAGTAAGTA
GATCATTACGCAGCCTCAGCAAAGCCGATCCGGAGCTTACCAAAGTCGAA
AACAGTGTGATAAACCCCCATGAATACATCTCCCAGAATCCACAGAGGAC
CCCTTGGAGGAGGCAGGTCGAAAGCCATGAAGCCACTGATGCAGACTTCT
GCAATCCCTTCTCCGGTTTTCAAAATATACTGCTCTGGAGAGAGGGTGAA
AATTTTGTCTCCGATGGTGAATGAAACATTTGGCATGGTTGGAATGCGAT
CACAGTCAATAATTGATTCCCCCATCGGATTTGGCAGGCTGTCGCAGAGC
TCATTTATATAACTGAGTACTTTCTCCTTTGTTTGCTTTTGTTTTAGCTG
ATTCTGGACCCAAACCACGGCCATTTCACAAGCACTGCACACTGCACTAT
CCCCGGCTGATACGTTTTCCTTCTCAACCACGGTCTTGATCCCAGTACTC
ACATATTCAGCGCCATTGAAAGCACATAAACCAATCTGCTGACATACTTT
C
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