CB290582

Overview
NameCB290582
Unique NameCB290582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 279.641 bits (714), Expect = 1.306e-74
Identity = 131/195 (67.18%), Postives = 154/195 (78.97%), Query Frame = 2
Query:  200 GVRHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYV 784
            GVR    DSD +++ LKN+MDAQYFGEIGIG+PPQ F+VIFDTGSSNLWVPSSKCYFS++C FHS+Y+S  S TY + GKS  I YG+GSISGFFSQ              FIEAT+E  +TFL A+FDGI+GLGF+EI+VGDAVPVW  M+ QGLV E VFSFWLNR+ D +EGGE+VFGGVDP HFKG+HTYV
Sbjct:   28 GVRGNFRDSDGELIALKNYMDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSVACLFHSKYRSTDSTTYKKNGKSAAIQYGTGSISGFFSQDSVKLGDLLVKEQDFIEATKEPGITFLAAKFDGILGLGFQEISVGDAVPVWYTMLNQGLVQEPVFSFWLNRNADEQEGGELVFGGVDPNHFKGEHTYV 222          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 3.801e-74
Identity = 133/255 (52.16%), Postives = 177/255 (69.41%), Query Frame = 2
Query:   20 EQKLLRSVFCLWVLASCLLLPASSNXXXXXXXXXXXXXXHSLNAARITRKERYMGGAGVSGVRHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYV 784
            ++ LL    CLW L+  LLL ASS+                L AA++ ++   +          + G SD D +PL ++++ QY+G IG+GSPPQNF+VIFDTGSSNLWVPS+KCYFSI+CY HSRY S+KS++Y   G++C+I YGSG+ISGFFS+              FIEATRE S+TF++ +FDGI+GLG+ EI+VG A P+W +M EQ L++++VFSFWLNRDPDA  GGE+VFGG+DPKH+KG HTYV
Sbjct:    3 KRHLLLVTTCLWALSCALLLHASSDGFLRVNLNKKRLDKEDLTAAKLAQQGNRL---------LKTGSSDSDPVPLVDYLNTQYYGVIGLGSPPQNFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYNSKKSSSYKADGETCKITYGSGAISGFFSKDNVLVGDLVVKNQKFIEATRETSVTFIIGKFDGILGLGYPEISVGKAPPIWQSMQEQELLADDVFSFWLNRDPDASSGGELVFGGMDPKHYKGDHTYV 248          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 2.086e-72
Identity = 133/214 (62.15%), Postives = 164/214 (76.64%), Query Frame = 2
Query:  149 AARITRKE--RYMGGAGVSGVRHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYV 784
            AAR++ +E  R +G  G + +    G  + DI+ LKN+M+AQYFGEIG+G+PPQ F+VIFDTGSSNLWVPS+KCYFSI+C+FHSRYKS +S+TY + GK   I YG+GSI+GFFS+              FIEAT+E  LTF++A+FDGI+GLGF+EI+VGDAVPVW  MVEQGLVSE VFSFW NR  D  EGGEIVFGG+DP H+KG HTYV
Sbjct:   45 AARLSGEEGARRLGLRGANSLGG--GGGEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACFFHSRYKSGQSSTYQKNGKPAAIQYGTGSIAGFFSEDSVTVGDLVVKDQEFIEATKEPGLTFMVAKFDGILGLGFQEISVGDAVPVWYKMVEQGLVSEPVFSFWFNRHSDEGEGGEIVFGGMDPSHYKGNHTYV 256          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 5.680e-70
Identity = 122/197 (61.93%), Postives = 153/197 (77.66%), Query Frame = 2
Query:  194 VSGVRHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYV 784
            +SG      + + DI+ LKN+M+AQYFGEIG+G+PPQ F+VIFDTGSSNLWVPS+KCYFSI+CY HSRYK+  S+TY + GK   I YG+GSI+G+FS+              FIEAT+E  +TFL+A+FDGI+GLGF+EI+VG AVPVW  M+EQGLVS+ VFSFWLNR  D  EGGEI+FGG+DPKH+ G+HTYV
Sbjct:   59 LSGANPLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYV 255          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.808e-69
Identity = 136/250 (54.40%), Postives = 176/250 (70.40%), Query Frame = 2
Query:   47 CLWVLASCLLLPASSNXXXXXXXXXXXXXX-HSLNAARITRKERYMGGAGVS--GVRHRLGDS-DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYV 784
            CL++L S  ++ ++SN                +  AAR+  K+  +  A       +  LG+S D DI+ LKN++DAQY+GEI IG+PPQ F+VIFDTGSSNLWV   +C FS++C+FH+RYKS +S++Y + G S  I YG+G++SGFFS               FIEATRE SLTFL+A+FDG++GLGF+EIAVG+AVPVW NMVEQGLV E VFSFWLNR+ + EEGGEIVFGGVDPKH++GKHTYV
Sbjct:   12 CLFLLVSFNIVSSASNDGLLRVGLKKIKLDPENRLAARVESKDAEILKAAFRKYNPKGNLGESSDTDIVALKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWV-LCECLFSVACHFHARYKSSRSSSYKKNGTSASIRYGTGAVSGFFSYDNVKVGDLVVKEQVFIEATREPSLTFLVAKFDGLLGLGFQEIAVGNAVPVWYNMVEQGLVKEPVFSFWLNRNVEEEEGGEIVFGGVDPKHYRGKHTYV 260          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.529e-50
Identity = 90/181 (49.72%), Postives = 126/181 (69.61%), Query Frame = 2
Query:  245 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYV 784
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C+   I+C  H +Y + KS+TY E G    I+YG+GS+SGF SQ              F EA ++  +TF+ A+FDGI+G+ F  I+V    P +DN+++Q L+ + +FSF+LNRDP A+ GGE++ GG DPK++ G  ++V
Sbjct:   70 LKNYMDAQYYGEIGIGTPPQKFTVVFDTGSSNLWVPSVHCHLLDIACLLHHKYDASKSSTYVENGTEFAIHYGTGSLSGFLSQDTVTLGNLKIKNQIFGEAVKQPGITFIAAKFDGILGMAFPRISVDKVTPFFDNVMQQKLIEKNIFSFYLNRDPTAQPGGELLLGGTDPKYYSGDFSWV 250          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.900e-49
Identity = 93/182 (51.10%), Postives = 123/182 (67.58%), Query Frame = 2
Query:  242 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFS-ISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYV 784
            PL N++DAQY+G I IG+PPQ+F V+FDTGSSNLWVPS +C F+ I+C  H++Y ++KS+T+ + G +  I YGSGS+SG+ S               F EA  E  L F+ A+FDGI+GLG+  I+V   VPV+ NM  QGL+   VFSF+LNRDP A EGGEI+FGG D   + G  TY+
Sbjct:   59 PLSNYLDAQYYGAITIGTPPQSFKVVFDTGSSNLWVPSKECSFTNIACLMHNKYNAKKSSTFEKNGTAFHIQYGSGSLSGYLSTDTVGLGGVSVTKQTFAEAINEPGLVFVAAKFDGILGLGYSSISVDGVVPVFYNMFNQGLIDAPVFSFYLNRDPSAAEGGEIIFGGSDSNKYTGDFTYL 240          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.481e-49
Identity = 93/192 (48.44%), Postives = 133/192 (69.27%), Query Frame = 2
Query:  245 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXX-----------FIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYV 784
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ                         F EAT++  +TF+ A+FDGI+G+ +  I+V + +PV+DN+++Q LV + +FSF+L+RDPDA+ GGE++ GG D K++KG  +Y+
Sbjct:   71 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDSKYYKGSLSYL 262          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.527e-49
Identity = 92/190 (48.42%), Postives = 133/190 (70.00%), Query Frame = 2
Query:  245 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXX---------FIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYV 784
            L+N+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ                       F EAT++  +TF+ A+FDGI+G+ +  I+V + +PV+DN+++Q LV + +FSF+LNRDP+A+ GGE++ GG D K++KG  +Y+
Sbjct:   71 LRNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSALSGLAGIKVERQTFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVEKNIFSFYLNRDPNAQPGGELMLGGTDSKYYKGPLSYL 260          
BLAST of CB290582 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.231e-48
Identity = 93/190 (48.95%), Postives = 130/190 (68.42%), Query Frame = 2
Query:  245 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXX----------FIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTY 781
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G +  I+YGSGS+SG+ S                         F EAT++  LTF+ A+FDGI+G+ +  I+V + VPV+DN+++Q LV +++FSF+LNRDP A+ GGE++ GG+D K++KG   Y
Sbjct:    7 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTTFAIHYGSGSLSGYLSSQDTVSVPCNSALSGVGGIKVERQTFGEATKQPGLTFIAAKFDGILGMAYPRISVNNVVPVFDNLMQQKLVDKDIFSFYLNRDPGAQPGGELMLGGIDSKYYKGSLDY 196          
The following BLAST results are available for this feature:
BLAST of CB290582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
CYPR1_CYNCA1.306e-7467.18Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPRX_ORYSJ3.801e-7452.16Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
ASPR1_ORYSJ2.086e-7262.15Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
ASPR_HORVU5.680e-7061.93Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPR_CUCPE4.808e-6954.40Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
CATD_CHICK6.529e-5049.72Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1[more]
ASPP_AEDAE1.900e-4951.10Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATD_HUMAN2.481e-4948.44Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATD_CANFA5.527e-4948.42Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1[more]
CATD_PIG1.231e-4848.95Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01cd03_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01cd03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290582 ID=CB290582; Name=CB290582; organism=Citrus sinensis; type=EST; length=784bp
GCACTAGGAGAACATCATGGAGCAGAAACTTCTTCGGTCAGTTTTCTGTT
TATGGGTGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCCTCTAATGGCTTA
CGGAGAATTGGCTTGAAGAAGCGGCGACTAGATCTTCATAGTCTAAATGC
TGCAAGAATAACAAGAAAAGAGCGATATATGGGGGGAGCAGGTGTTAGTG
GCGTGCGCCATCGTTTGGGTGATTCAGATGAAGATATATTGCCTTTGAAG
AACTTTATGGATGCTCAATACTTTGGAGAGATTGGTATTGGCTCTCCCCC
ACAAAATTTCAGTGTCATATTTGATACCGGCAGTTCCAATCTCTGGGTTC
CATCTTCAAAGTGCTATTTCTCTATTTCCTGCTATTTCCATTCGAGGTAC
AAGTCCAGAAAATCCAATACATATACCGAAATTGGAAAATCCTGTGAAAT
AAACTATGGATCTGGATCAATTTCTGGCTTCTTCAGTCAAGACAATGTTG
AAGTTGGGGATGTTGTTGTCAAGGATCAGGTTTTCATTGAGGCTACACGA
GAAGGGAGTCTCACTTTTCTATTGGCAAGGTTTGATGGAATAATAGGGCT
TGGGTTCCGGGAAATTGCAGTTGGGGATGCTGTGCCTGTGTGGGACAATA
TGGTTGAGCAGGGCCTTGTAAGCGAGGAGGTCTTCTCATTCTGGCTCAAC
AGGGATCCAGACGCTGAAGAGGGTGGAGAGATTGTTTTTGGTGGTGTTGA
TCCAAAGCACTTTAAAGGGAAGCATACCTATGTT
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