CB290601

Overview
NameCB290601
Unique NameCB290601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.048e-64
Identity = 125/170 (73.53%), Postives = 139/170 (81.76%), Query Frame = -1
Query:  270 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGGDFATWGRNYIRDHFLTPGIFDTRL-NFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSMLI 776
            LGAAEGLAYLHHDCKPRI  RDIKSNNIL+D+ FEAHVGDFGLAKVIDMP  KS+SAVAGSYGYIAPEYAYTMKV+EK DI S+GVVLLELLTG+ PVQPL+ GGD ATW RN+IRDH LT  I D  L   ED   ++ MI V K+A++CT  SP D P+MREVV MLI
Sbjct:  931 LGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGGDLATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVLMLI 1100          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.023e-39
Identity = 87/170 (51.18%), Postives = 117/170 (68.82%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQF-KSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQP-LDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            LGAA+GLAYLHHDC P I  RDIK+NNIL+   FE ++GDFGLAK++D   F +S + +AGSYGYIAPEY Y+MK++EK D+ SYGVV+LE+LTG+ P+ P + DG     W +  IRD      + D  L    +S V+ M+  L VAL+C +  P D P+M++V +ML
Sbjct:  899 LGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGLHIVDWVKK-IRD----IQVIDQGLQARPESEVEEMMQTLGVALLCINPIPEDRPTMKDVAAML 1063          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 1.023e-39
Identity = 91/173 (52.60%), Postives = 110/173 (63.58%), Query Frame = -1
Query:  273 AAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAK-VIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGGDFATWGRN------YIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 770
            AA+GL YLHHDC P I  RD+KSNNILLD  FEAHV DFGLAK ++D    + MS++AGSYGYIAPEYAYT+KV EK D+ S+GVVLLEL+ G+ PV    +G D   W RN         D  +   I D RL     ++V   I V K+A+MC        P+MREVV ML
Sbjct:  798 AAKGLCYLHHDCSPLILHRDVKSNNILLDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGEGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRLTGYPLTSV---IHVFKIAMMCVEEEAAARPTMREVVHML 967          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.977e-39
Identity = 84/172 (48.84%), Postives = 116/172 (67.44%), Query Frame = -1
Query:  270 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVI-DMPQF-KSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQP-LDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSMLI 776
            +GAA+GLAYLHHDC P I  RD+K NNILLD K+EA + DFGLAK++ + P +  +MS VAGSYGYIAPEY YTM ++EK D+ SYGVVLLE+L+GR+ V+P + DG     W +  +        + D +L       V  M+  L +A+ C + SP + P+M+EVV++L+
Sbjct:  879 IGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVEPQIGDGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLGIAMFCVNPSPVERPTMKEVVTLLM 1050          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.251e-37
Identity = 81/170 (47.65%), Postives = 115/170 (67.65%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQF-KSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQP-LDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            LGAA+GLAYLHHDC P I  RDIK+NNIL+   FE ++ DFGLAK++D     +  + VAGSYGYIAPEY Y+MK++EK D+ SYGVV+LE+LTG+ P+ P + +G     W    +R +  +  + D+ L    ++  D M+ VL  AL+C + SP + P+M++V +ML
Sbjct:  898 LGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTVPEGIHLVDW----VRQNRGSLEVLDSTLRSRTEAEADEMMQVLGTALLCVNSSPDERPTMKDVAAML 1063          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.134e-37
Identity = 81/169 (47.93%), Postives = 111/169 (65.68%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQP-LDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            +G A+G+ YLHHDC P I  RD+K +NILLD  FEA V DFG+AK+I   +  SMS VAGSYGYIAPEYAYT++V +K DI SYGV+LLE++TG+  V+P   +G     W R+ ++       + D  +        + M  +L++AL+CTS SP D P MR+V+ +L
Sbjct:  831 IGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDE--SMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFGEGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLIL 997          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.407e-35
Identity = 85/171 (49.71%), Postives = 109/171 (63.74%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFK---SMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            L AAEGL+YLHHDC P I  RD+KS+NILLD  + A V DFG+AKV  M   K   +MS +AGS GYIAPEY YT++V+EK DI S+GVVLLEL+TG+ P        D A W    +    L P + D +L+ + K  +     V+ + L+CTS  P + PSMR+VV ML
Sbjct:  798 LDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSELGDKDMAKWVCTALDKCGLEP-VIDPKLDLKFKEEISK---VIHIGLLCTSPLPLNRPSMRKVVIML 964          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.208e-34
Identity = 84/170 (49.41%), Postives = 108/170 (63.53%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQF--KSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQPLDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            L AAEGL+YLHHD  P I  RDIKSNNIL+D  + A V DFG+AK +D+     KSMS +AGS GYIAPEYAYT++V+EK DI S+GVV+LE++T + PV P     D   W  + + D      + D +L   D    + +  +L V L+CTS  P + PSMR VV ML
Sbjct:  794 LDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVDPELGEKDLVKWVCSTL-DQKGIEHVIDPKL---DSCFKEEISKILNVGLLCTSPLPINRPSMRRVVKML 959          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.091e-31
Identity = 71/170 (41.76%), Postives = 106/170 (62.35%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQP--LDDGGDFATWGRNYIRDHFLTPGIFDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            +GAA+GLAYLHHDC PRI  RDIKS+NILLD   EA V DFGLAK+++  +    + VAG++GY+APEY  + + +EK D+ S+GV++LE+L+G+ P     ++ G +   W  N++        I D      ++ ++D +   L +A  C S SP + P+M  VV +L
Sbjct:  406 IGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGW-LNFLISENRAKEIVDLSCEGVERESLDAL---LSIATKCVSSSPDERPTMHRVVQLL 571          
BLAST of CB290601 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 5.091e-31
Identity = 77/173 (44.51%), Postives = 106/173 (61.27%), Query Frame = -1
Query:  273 LGAAEGLAYLHHDCKPRIFPRDIKSNNILLDDKFEAHVGDFGLAKVIDMPQFKSMSAVAGSYGYIAPEYAYTMKVSEKWDISSYGVVLLELLTGRTPVQ----PLDDGGDFATWGRNYIRDHFLTPGI-FDTRLNFEDKSTVDPMIFVLKVALMCTSISPFDSPSMREVVSML 776
            LG+A GLAYLH  C P+I  RD+K+ NILLD++FEA VGDFGLAK++D       +AV G+ G+IAPEY  T K SEK D+  YGV+LLEL+TG+          DD      W +  +++  L   +  D + N++D+        +++VAL+CT  SP + P M EVV ML
Sbjct:  395 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQ----LIQVALLCTQSSPMERPKMSEVVRML 563          
The following BLAST results are available for this feature:
BLAST of CB290601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
Y2317_ARATH2.048e-6473.53Probable leucine-rich repeat receptor-like protein... [more]
RCH1_ARATH1.023e-3951.18LRR receptor-like serine/threonine-protein kinase ... [more]
CLV1_ARATH1.023e-3952.60Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
Y1341_ARATH2.977e-3948.84Probable LRR receptor-like serine/threonine-protei... [more]
RCH2_ARATH1.251e-3747.65Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
Y5148_ARATH2.134e-3747.93Probable leucine-rich repeat receptor-like protein... [more]
RLK5_ARATH3.407e-3549.71Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
HSL1_ARATH2.208e-3449.41Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
FEI2_ARATH5.091e-3141.76LRR receptor-like serine/threonine-protein kinase ... [more]
BAK1_ARATH5.091e-3144.51BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ce03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ce03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290601 ID=CB290601; Name=CB290601; organism=Citrus sinensis; type=EST; length=776bp
TTTTTTTTTTTTTTTTTACACCACCGTTGCTGAACTTTATTGAGGGCAAA
GGGATTTACACAACCCCCAAAGAGCATTAATTTTATTTGCTGATGGATAA
ATGTACATGATCTCATCAACTGGCTATTGCAAATAATGTGAGGAAAAATC
GGCACCAATTAAAACCATTTTGGGTAATAAAATCCCCAAAATGGTTACCT
ACTTTCATGAATCTGAGGAAAATCATAAGTTGGAAAAAAATTAAATCTGC
CTTCTCCCTCATTAAACTCAATAAGCATTGATACAACTTCCCGCATTGAG
GGGCTATCAAAAGGAGAAATGCTTGTGCACATCAAAGCAACTTTTAAAAC
AAAAATCATGGGGTCAACTGTACTTTTATCTTCAAAATTTAATCGCGTAT
CGAATATCCCCGGAGTCAAAAAATGGTCCCGAATATAATTCCTCCCCCAA
GTAGCAAAATCCCCTCCATCATCTAATGGCTGTACAGGAGTTCTTCCAGT
TAACAACTCCAACAGGACAACACCATAGCTGGAAATGTCCCATTTTTCCG
AAACCTTCATAGTGTATGCATATTCAGGGGCAATGTAACCATATGATCCT
GCAACTGCTGACATTGATTTAAATTGAGGCATGTCAATCACTTTAGCTAA
TCCAAAATCACCAACATGCGCTTCAAATTTATCATCAAGTAGAATATTAT
TAGACTTGATATCACGGGGAAAAATTCTTGGTTTGCAATCATGATGGAGG
TAAGCGAGACCCTCGGCAGCTCCAAG
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