CB290624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFB_ARATH (Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2) HSP 1 Score: 378.252 bits (970), Expect = 3.019e-104 Identity = 183/217 (84.33%), Postives = 194/217 (89.40%), Query Frame = 1 Query: 193 EGQNSNSTTSGV-KRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 EGQ SNST S +R DPE ALY ELWHACAGPLVTVPR+ +RV+YFPQGHIEQVEASTNQ A+QQMP+YDLPSK+LCRVINV LKAE DTDEV+AQ+TLLPE+NQDENA+EKE RF VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLH NEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR Sbjct: 36 EGQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 252
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSJ (Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23 PE=1 SV=2) HSP 1 Score: 327.02 bits (837), Expect = 7.981e-89 Identity = 163/206 (79.13%), Postives = 178/206 (86.41%), Query Frame = 1 Query: 238 GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDEN--AVEKEXXXXXXX---RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 G E AL+TELW ACAGPLVTVPR GE+V+YFPQGHIEQVEASTNQV +Q+M +Y+LP KILC V+NV+LKAEPDTDEV+AQ+TLLPES Q E+ + E+E R VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLHG EWRFRHIFRGQPRRHLLQSGWSVFVS+KRLVAGDAFIFLR Sbjct: 32 GGGEDALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLR 237
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSI (Auxin response factor 23 OS=Oryza sativa subsp. indica GN=ARF23 PE=2 SV=1) HSP 1 Score: 324.709 bits (831), Expect = 3.961e-88 Identity = 162/206 (78.64%), Postives = 177/206 (85.92%), Query Frame = 1 Query: 238 GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDEN--AVEKEXXXXXXX---RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 G E AL+TELW ACAGPLVTVPR GE+V+YFPQGHIEQVEASTNQV +Q+M +Y+LP KILC V+NV+LKAEPDTDEV+AQ+TLLPE Q E+ + E+E R VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL AKDLHG EWRFRHIFRGQPRRHLLQSGWSVFVS+KRLVAGDAFIFLR Sbjct: 32 GGGEDALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVMNVELKAEPDTDEVYAQLTLLPELKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLR 237
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFD_ORYSJ (Auxin response factor 4 OS=Oryza sativa subsp. japonica GN=ARF4 PE=2 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 5.720e-87 Identity = 159/203 (78.33%), Postives = 172/203 (84.73%), Query Frame = 1 Query: 238 GDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFH--VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 GDP LY ELWHACAGPLVTVPR G+ V+YFPQGHIEQVEAS NQVAD QM +YDLPSK+LCRV+NV+LKAE DTDEV+AQV L+PE Q+E AVEK + V SFCKTLTASDTSTHGGFSVLRRHADECLPPLDM++ PPTQEL AKDLH +WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR Sbjct: 18 GDP---LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 217
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFX_ORYSJ (Auxin response factor 24 OS=Oryza sativa subsp. japonica GN=ARF24 PE=2 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 4.532e-84 Identity = 164/231 (71.00%), Postives = 178/231 (77.06%), Query Frame = 1 Query: 187 PMEGQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQ-MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENA----------VEKEXXXXXXX--RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 P+EG T G G L+ ELW ACAGPLVTVP GERV+Y PQGHIEQVEASTNQVA+QQ P+Y+LP KI C+V+NV+LKAEPDTDEV+AQ+TLLPE QD N VE+E R VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS+ PPTQEL AKDLHG EWRFRHIFRGQPRRHLLQSGWSVFVS+KRLVAGDAFIFLR Sbjct: 11 PVEG-----LTGGGGGGGGGVDGLFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLR 236
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFG_ORYSJ (Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 5.011e-83 Identity = 145/196 (73.98%), Postives = 170/196 (86.73%), Query Frame = 1 Query: 253 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 ALY ELWHACAGPLVTVPR+GE VYYFPQGH+EQ+EAST+Q DQ +P+++LPSKILC+V+NV+L+AE D+DEV+AQ+ L PE++Q+E K + +VHSFCKTLTASDTSTHGGFSVLRRHA+ECLPPLDM++ PP QEL A+DLHGNEW FRHIFRGQPRRHLL +GWSVFVSSKRLVAGDAFIFLR Sbjct: 22 ALYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCKVVNVELRAETDSDEVYAQIMLQPEADQNELTSPKPEPHEPE-KCNVHSFCKTLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLR 216
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFA_ARATH (Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 304.679 bits (779), Expect = 4.242e-82 Identity = 145/196 (73.98%), Postives = 167/196 (85.20%), Query Frame = 1 Query: 253 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 AL ELWHACAGPLVT+PREGERVYYFP+GH+EQ+EAS +Q +QQMP ++LPSKILC+VIN+Q +AEP+TDEV+AQ+TLLPE +Q E + + VHSFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDMS+QPP QEL A DLH +EW FRHIFRGQPRRHLL +GWSVFVSSK+LVAGDAFIFLR Sbjct: 18 ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSE-PTSPDAPVQEPEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLR 212
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFI_ORYSJ (Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9 PE=2 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 3.591e-81 Identity = 143/196 (72.96%), Postives = 164/196 (83.67%), Query Frame = 1 Query: 253 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 AL+ ELWHACAGPLVTVP+ GERVYYFPQGH+EQ+EASTNQ DQ +P+++LPSKILC V+NV+L+AE D+DEV+AQ+ L PE++Q E + + HSFCKTLTASDTSTHGGFSVLRRHA+ECLP LDMS+ PP QEL AKDLHG EW FRHIFRGQPRRHLL +GWSVFVSSKRLVAGDAFIFLR Sbjct: 20 ALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSE-LTSLDPELQDLEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLR 214
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFK_ARATH (Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3) HSP 1 Score: 277.33 bits (708), Expect = 7.252e-74 Identity = 137/203 (67.49%), Postives = 162/203 (79.80%), Query Frame = 1 Query: 235 VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 +G + LYTELW ACAGPLV VPR GERV+YFPQGH+EQ+ ASTNQ V DQ++PV++LP KILCRV++V LKAE +TDEV+AQ+TL PE +Q E + + V SF K LTASDTSTHGGFSVLR+HA ECLP LDM++ PTQEL A+DLHG EWRF+HIFRGQPRRHLL +GWS FV+SKRLVAGDAF+FLR Sbjct: 32 LGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLR 233
BLAST of CB290624 vs. ExPASy Swiss-Prot
Match: ARFR_ARATH (Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 5.197e-72 Identity = 132/196 (67.35%), Postives = 155/196 (79.08%), Query Frame = 1 Query: 256 LYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ-VADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 840 LYTELW CAGPLV VPR ERV+YFPQGH+EQ+ ASTNQ + +++PV+DLP KILCRV++V LKAE +TDEV+AQ+TL PE +Q E + + HSF K LTASDTSTHGGFSVLR+HA ECLP LDM++ PTQEL +DLHG EWRF+HIFRGQPRRHLL +GWS FVSSKRLVAGDAF+FLR Sbjct: 22 LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPIVGPTKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLR 216 The following BLAST results are available for this feature:
BLAST of CB290624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290624 ID=CB290624; Name=CB290624; organism=Citrus sinensis; type=EST; length=840bpback to top |