CB290673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290673 vs. ExPASy Swiss-Prot
Match: C3H29_ARATH (Zinc finger CCCH domain-containing protein 29 OS=Arabidopsis thaliana GN=At2g40140 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.491e-57 Identity = 121/231 (52.38%), Postives = 158/231 (68.40%), Query Frame = 1 Query: 115 SNSKFCSSNFLMEGELPKLK--DGALYNKSSMLLELSASDDISAYKREIEEK-GFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVDVNRACGSDGFTALHCAVAGGAKSSFEVVKLLLSASADVNCVDAYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDH-TIFEEEELVNIPVPQLSKDGTEKKEYPIDVSLPDINNGVYGTDDFRMYAFKI 795 + S CSS L E E + K DGA ++ LLE +A DD+S++KREIEE ++DE FWY RR+GSKKMGFEERTP+M+AAM+GS+ VL Y+I TG+ DVNR C + TALHCAV+G + S E++K+LL ASA NCVDA GNKPVDL+ + + ++A+E+LL G H ++ EEEE +L T +YP D SLPDIN GVYGTDDFRM++FK+ Sbjct: 4 AKSNLCSSKTLTEVEFMRQKSEDGA---SATCLLEFAACDDLSSFKREIEENPSVEIDESGFWYCRRVGSKKMGFEERTPLMVAAMYGSMEVLNYIIATGRSDVNRVCSDEKVTALHCAVSGCSVSIVEIIKILLDASASPNCVDANGNKPVDLLAKDSRFVPNQSRKAVEVLLTGIHGSVMEEEE------EELKSVVT---KYPADASLPDINEGVYGTDDFRMFSFKV 222
BLAST of CB290673 vs. ExPASy Swiss-Prot
Match: C3H66_ARATH (Zinc finger CCCH domain-containing protein 66 OS=Arabidopsis thaliana GN=At5g58620 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 5.665e-57 Identity = 114/208 (54.81%), Postives = 147/208 (70.67%), Query Frame = 1 Query: 193 KSSMLLELSASDDISAYKREIEEKGFD-VDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVDVNRACGSDGFTALHCAVAGGAKSSFEVVKLLLSASADVNCVDAYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTI------FEEEELVNIPVPQLSKDGTEKKEYPIDVSLPDINNGVYGTDDFRMYAFKI 795 K S+LLE SA +D+S +K +EE+G + +D WYGRR+GSKKMGFEERTP+MIAA+FGS V+ Y+I TG VDVNR+CGSDG TALHCAV+G + +S E+V LLL SA+ + DAYGNKP D+I + +R + +E LLKG+ + E E V + V G+E+KEYP+D +LPDI NGVYGTD+FRMYAFKI Sbjct: 10 KFSLLLESSACNDLSGFKSLVEEEGLESIDGSGLWYGRRLGSKKMGFEERTPLMIAALFGSKEVVDYIISTGLVDVNRSCGSDGATALHCAVSGLSANSLEIVTLLLKGSANPDSCDAYGNKPGDVIFPCLSPVFSARMKVLERLLKGNDDLNEVNGQEESEPEVEVEVEVSPPRGSERKEYPVDPTLPDIKNGVYGTDEFRMYAFKI 217
BLAST of CB290673 vs. ExPASy Swiss-Prot
Match: C3H47_ARATH (Zinc finger CCCH domain-containing protein 47 OS=Arabidopsis thaliana GN=At3g55980 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 5.303e-55 Identity = 111/225 (49.33%), Postives = 151/225 (67.11%), Query Frame = 1 Query: 121 SKFCSSNFLMEGELPKLKDGALYNKSSMLLELSASDDISAYKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVDVNRACGSDGFTALHCAVAGGAKSSFEVVKLLLSASADVNCVDAYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSKDGTEKKEYPIDVSLPDINNGVYGTDDFRMYAFKI 795 S CSS L E E + ++ ++ +LLE +A DD+ ++KRE+EEKG D+DE WY RR+GSKKMG EERTP+M+AAM+GS+ VL +++ TGK DVNRACG + T LHCAVAG + + EV+ +LL ASA VN VDA GN+P+D+ + R++A+ELLL+G +E V + +SK YP D SLPDIN GVYG+D+FRMY+FK+ Sbjct: 7 SNLCSSRTLTEIESRQKEE-----ETMLLLEFAACDDLDSFKREVEEKGLDLDESGLWYCRRVGSKKMGLEERTPLMVAAMYGSIKVLTFIVSTGKSDVNRACGEERVTPLHCAVAGCSVNMIEVINVLLDASALVNSVDANGNQPLDVFVRVSRFVASPRRKAVELLLRGGGVGGLIDEAVEEEIKIVSK-------YPADASLPDINEGVYGSDEFRMYSFKV 219
BLAST of CB290673 vs. ExPASy Swiss-Prot
Match: C3H30_ARATH (Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana GN=At2g41900 PE=1 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 3.689e-40 Identity = 95/224 (42.41%), Postives = 128/224 (57.14%), Query Frame = 1 Query: 205 LLELSASDDISAYKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVDVNRACGSDGFTALHCAVAGGAKSSFEVVKLLLSASADVNCVDAYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEEL---VNIP------------------------VPQLSKDGTEKKEYPIDVSLPDINNGVYGTDDFRMYAFKI 795 LLEL+A++D+ + IE VDE WYGR+ GSK M + RTP+M+AA +GS+ V+K ++ DVNRACG+D TALHCA +GGA ++ +VVKLLL+A AD+N +DA G + D+I V K L K ++ LL D + E L N+P P K KKEYP+D SLPDI N +Y TD+FRMY+FK+ Sbjct: 48 LLELAANNDVEGVRLSIERDPSCVDEAGLWYGRQKGSKAMVNDYRTPLMVAATYGSIDVIKLIVSLTDADVNRACGNDQTTALHCAASGGAVNAIQVVKLLLAAGADLNLLDAEGQRAGDVIVVPPK--LEGVKLMLQELLSADGSSTAERNLRVVTNVPNRSSSPCHSPTGENGGSGSGSPLGSPFKLKSTEFKKEYPVDPSLPDIKNSIYATDEFRMYSFKV 269
BLAST of CB290673 vs. ExPASy Swiss-Prot
Match: C3H56_ARATH (Zinc finger CCCH domain-containing protein 56 OS=Arabidopsis thaliana GN=At5g12850 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.818e-37 Identity = 88/240 (36.67%), Postives = 140/240 (58.33%), Query Frame = 1 Query: 169 LKDGALYNKS-SMLLELSASDDISAYKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVDVNRACGSDGFTALHCAVAGGAKSSFEVVKLLLSASADVNCVDAYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEE---------------------------EELVNIPVPQLSKDGT---EKKEYPIDVSLPDINNGVYGTDDFRMYAFKI 795 + D A + S S LLE +A +D+ ++R++ + +++ WY R+ ++M E+RTP+M+A+++GS+ V+K+++ + ++N +CG D TALHCA +G + +S +VVKLLLS AD N DA+GN+PVD++ V+ +P + +E +LK D I E+ + V+ P D T EKKEYPID SLPDI +G+Y TD+FRM++FKI Sbjct: 29 MNDAAEWEHSFSALLEFAADNDVEGFRRQLSDVSC-INQMGLWYRRQRFVRRMVLEQRTPLMVASLYGSLDVVKFILSFPEAELNLSCGPDKSTALHCAASGASVNSLDVVKLLLSVGADPNIPDAHGNRPVDVLVVSPHAP--GLRTILEEILKKDEIISEDLHASSSSLGSSFRSLSSSPDNGSSLLSLDSVSSPTKPHGTDVTFASEKKEYPIDPSLPDIKSGIYSTDEFRMFSFKI 265
BLAST of CB290673 vs. ExPASy Swiss-Prot
Match: C3H24_ORYSJ (Zinc finger CCCH domain-containing protein 24 OS=Oryza sativa subsp. japonica GN=Os03g0698800 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.895e-36 Identity = 95/227 (41.85%), Postives = 124/227 (54.63%), Query Frame = 1 Query: 205 LLELSASDDISAYKREIEEKG-FDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVDVNRACGSDGFTALHCAVAGGAKSSFEVVKLLLSASADVNCVDAYGNKPVDLIPVAMKSPLHSRKRAIELLL---KGDHTIF-------------------EEEELVNIPVPQLSKDG-------TEKKEYPIDVSLPDINNGVYGTDDFRMYAFKI 795 LLEL+A DD +R +E DE WYGRR E RTP+M+AA +GS+AVL+ ++ VDVNR CGSDG TALHCA +GG+ S E VKLLL+A AD + DA G +P D+I V K + K A++ LL K H + E+ + V +K +EKKEYP+D SLPDI N +Y +D+FRMY+FKI Sbjct: 70 LLELAADDDAEGLRRALERAPPAAADEAGLWYGRR-----KVLEHRTPLMVAATYGSLAVLRLLLSLPSVDVNRRCGSDGTTALHCAASGGSPSCVEAVKLLLAAGADADATDASGYRPADVISVPPK--MFDAKIALQDLLGCPKAGHGVLRVVTRAANSMLSPVSSPTAEDARSPSAAVMMTTKFADLPRVVTSEKKEYPVDPSLPDIKNSIYASDEFRMYSFKI 289
BLAST of CB290673 vs. ExPASy Swiss-Prot
Match: C3H33_ORYSJ (Zinc finger CCCH domain-containing protein 33 OS=Oryza sativa subsp. japonica GN=Os05g0128200 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.951e-34 Identity = 81/213 (38.03%), Postives = 122/213 (57.28%), Query Frame = 1 Query: 160 LPKLKDGALYNKSSMLLELSASDDISAYKREIEEKGFDVDEPSFWYGRRI-GSKKMGFEERTPIMIAAMFGSVAVLKYVIETGKVDVNRACGSDGFTALHCAVAGGAKSSFEVVKLLLSASADVNCVDAYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSKDGTEKKEYPIDVSLPDINNGVYGTDDFRMYAFKI 795 LP+ + A +S+LLEL+A+DD++A +R +EE+ + WYG G ++G E RT M+AA++GS VL YV+ + RA +DG T LH A AGGA ++ +LLL+A A V+ + A G + DL+P A + ++AI LLLK + P KKEYP D++LPD+ +G++ TD+FRMY+FK+ Sbjct: 13 LPQQQKEATVMAASLLLELAAADDVAAVRRVVEEEKVSLGVAGLWYGPSASGVARLGMERRTAAMVAALYGSTGVLGYVVAAAPAEAARASETDGATPLHMAAAGGAANAVAATRLLLAAGASVDALSASGLRAGDLLPRAT-----AAEKAIRLLLKSPAVSPSSSPKKSASPPSPPPPQEAKKEYPPDLTLPDLKSGLFSTDEFRMYSFKV 220
BLAST of CB290673 vs. ExPASy Swiss-Prot
Match: C3H50_ORYSJ (Zinc finger CCCH domain-containing protein 50 OS=Oryza sativa subsp. japonica GN=Os07g0568300 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.998e-29 Identity = 84/232 (36.21%), Postives = 121/232 (52.16%), Query Frame = 1 Query: 178 GALYNKSSMLLELSASDDISAYKREIEEKGFDV----DEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGK-VDVNRACGSDGFTALHCAVAGGAKSSFEVVKLLLSASADVNCVDAYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVN-IPVPQLSKDGTE--------------------KKEYPIDVSLPDINNGVYGTDDFRMYAFKI 795 G ++ + LLEL+A+DD+ + + E G + D WYGR +E RTP+M+AA +GS V+ ++ G VDVNR G+DG TALHCA +GG++++ VVKLLL+A AD D+ G P D+I SP +E+LL + + + P LS E KKEYP+D +LPDI + VY +D+FRM+AFK+ Sbjct: 18 GGRRDRLAALLELAAADDVDGLRGALAEGGEEAAELADGVGLWYGR-----SKAYEARTPLMVAATYGSAGVVSLLVGLGGCVDVNRRPGADGATALHCAASGGSRNAVAVVKLLLAAGADPATPDSAGRFPADVILAPPASP--DALGDLEVLLGRRRALAVATSVASGSSSPPLSSSPDEGNRSPSSRSSSLSPITVDRGKKEYPVDPTLPDIKSSVYASDEFRMFAFKV 242
BLAST of CB290673 vs. ExPASy Swiss-Prot
Match: C3H67_ORYSJ (Zinc finger CCCH domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=Os12g0515500 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.234e-19 Identity = 71/207 (34.30%), Postives = 104/207 (50.24%), Query Frame = 1 Query: 178 GALYNKSSMLLELSASDDISAYKREIEEKGFDVDEPSFWYGRRIGSKKMGFEERTPIMIAAMFGSVAVLKYVIETGK-VDVNRACGSDGFTALHCAVAGGAKSSFEVVKLLLSASADVNCVDAYGNKPVDLIPVAMKSPLHSRKRAIELLLKGDHTIFEEEELVNIPVPQLSKDGTEKKEYPIDVSLPDINNGVYGTDDFRMYAFKI 795 GA S+ LLEL+A D+ + + DEP+ WY + G E TP+M+AA++GSV L ++ VD NRA S T LH A AGG+ S+ V LL+A AD +D H ++RA +L+ +++ + L+++ +KE+P D SLPDI NG Y +DDFRMY+FK+ Sbjct: 6 GAEAAVSARLLELAADDNAAGLGELLAAWPSLADEPAPWY-----TPARGAEPLTPLMVAAVYGSVGCLDALLSPPYLVDPNRASASSLSTPLHLAAAGGSASAPAAVSRLLAAGADPALLD------------------HLQRRASDLVALPPNSLPLKNHLLSLL--------GARKEWPPDPSLPDIKNGAYASDDFRMYSFKV 181 The following BLAST results are available for this feature:
BLAST of CB290673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290673 ID=CB290673; Name=CB290673; organism=Citrus sinensis; type=EST; length=795bpback to top |