CB290735

Overview
NameCB290735
Unique NameCB290735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.752e-57
Identity = 125/165 (75.76%), Postives = 125/165 (75.76%), Query Frame = -2
Query:  335 MSSAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQSRAD 829
            MSS FSGDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                GMAIGIVGDAGVRANAQQPKLFVGM           LYGLIVGIILSSRAGQSRAD
Sbjct:    1 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.382e-56
Identity = 124/165 (75.15%), Postives = 125/165 (75.76%), Query Frame = -2
Query:  335 MSSAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQSRAD 829
            MSS FSGDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                GMAIGIVGDAGVRANAQQPKLFVGM           LYGLIVGIILSSRAGQSRA+
Sbjct:    1 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL_ORYSJ (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.806e-56
Identity = 124/165 (75.15%), Postives = 124/165 (75.15%), Query Frame = -2
Query:  335 MSSAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQSRAD 829
            MSS FSGDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY                GMAIGIVGDAGVRANAQQPKLFVGM           LYGLIVGIILSSRAGQSRAD
Sbjct:    1 MSSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL_ORYSI (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.806e-56
Identity = 124/165 (75.15%), Postives = 124/165 (75.15%), Query Frame = -2
Query:  335 MSSAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQSRAD 829
            MSS FSGDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY                GMAIGIVGDAGVRANAQQPKLFVGM           LYGLIVGIILSSRAGQSRAD
Sbjct:    1 MSSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.358e-56
Identity = 123/165 (74.55%), Postives = 125/165 (75.76%), Query Frame = -2
Query:  335 MSSAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQSRAD 829
            MS+ F+GDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                GMAIGIVGDAGVRANAQQPKLFVGM           LYGLIVGIILSSRAGQSRAD
Sbjct:    1 MSTVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.358e-56
Identity = 123/165 (74.55%), Postives = 125/165 (75.76%), Query Frame = -2
Query:  335 MSSAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQSRAD 829
            MS+ F+GDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                GMAIGIVGDAGVRANAQQPKLFVGM           LYGLIVGIILSSRAGQSRAD
Sbjct:    1 MSTVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL2_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c2 OS=Arabidopsis thaliana GN=VHA-C2 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.080e-56
Identity = 123/165 (74.55%), Postives = 125/165 (75.76%), Query Frame = -2
Query:  335 MSSAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQSRAD 829
            M+S FSGDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                GMAIGIVGDAGVRANAQQPKLFVGM           LYGLIVGIILSSRAGQSRA+
Sbjct:    1 MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL_AVESA (V-type proton ATPase 16 kDa proteolipid subunit OS=Avena sativa GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.253e-56
Identity = 123/165 (74.55%), Postives = 124/165 (75.15%), Query Frame = -2
Query:  335 MSSAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQSRAD 829
            MSS FSGDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK Y+LFDGY                GMAIGIVGDAGVRANAQQPKLFVGM           LYGLIVGIILSSRAGQSRAD
Sbjct:    1 MSSVFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL4_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c4 OS=Arabidopsis thaliana GN=VHA-C4 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.253e-56
Identity = 123/164 (75.00%), Postives = 124/164 (75.61%), Query Frame = -2
Query:  335 SSAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQSRAD 826
            SS FSGDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                GMAIGIVGDAGVRANAQQPKLFVGM           LYGLIVGIILSSRAGQSRA+
Sbjct:    3 SSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 166          
BLAST of CB290735 vs. ExPASy Swiss-Prot
Match: VATL_PHAAU (V-type proton ATPase 16 kDa proteolipid subunit OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.961e-56
Identity = 122/163 (74.85%), Postives = 124/163 (76.07%), Query Frame = -2
Query:  335 SAFSGDETAPXXXXXXXXXXXXFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXGMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXLYGLIVGIILSSRAGQSRAD 823
            ++FSGDETAP            FSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                GMAIGIVGDAGVRANAQQPKLFVGM           LYGLIVGIILSSRAGQSRAD
Sbjct:    2 ASFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164          
The following BLAST results are available for this feature:
BLAST of CB290735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL_KALDA4.752e-5775.76V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_GOSHI1.382e-5675.15V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSJ1.806e-5675.15V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSI1.806e-5675.15V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_MESCR2.358e-5674.55V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BETVU2.358e-5674.55V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_ARATH3.080e-5674.55V-type proton ATPase 16 kDa proteolipid subunit c2... [more]
VATL_AVESA5.253e-5674.55V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL4_ARATH5.253e-5675.00V-type proton ATPase 16 kDa proteolipid subunit c4... [more]
VATL_PHAAU8.961e-5674.85V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dc04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dc04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290735 ID=CB290735; Name=CB290735; organism=Citrus sinensis; type=EST; length=845bp
TTTTTTTTTTTTTTTTTAGACATAACCACACAATCAATTCGTGCACAGAA
ATTTGTAAACCCCAAAAGCCAACAAATAACACAAACCATAATGTGTAAGG
ATGGTTCTTTCATACGTCTGATTTCACAGTAAAAATACAACAATACATGT
CGAGAACTCAAGCATTATTTTAAGGGGAAAATCTTGCCCTTAATGGTACA
GGCAGAATGGAGCTACTTAATAATCTAGTGGGATATTGACAAACACCTCA
ACATTTCACATGGTGTCCTAGCATCATCTAAGTGAGCATGACCAAATAAT
TTTGAGAAACCTCTGTTCTGAACCACGCATCCTAATCTGCTCTGGATTGG
CCAGCTCGGGAAGAAAGAATAATGCCAACAATGAGACCATACAACGCCAA
TGCCTCAGCAAAAATGAGAATGAGAATCATTCCAACAAAAAGCTTTGGTT
GCTGTGCATTAGCTCTGACACCAGCATCACCAACGATGCCAATAGCCATA
CCAGCAGAGAGACCAGCGAGGCCGCAAGCGAGACCCGAAGACAAATGAGC
GTAGCCATCGAATAGATAATATGATTTGGCCTTTGGGTTAATGCCAGTAC
TAATAATAACAGCAATAATTAAACCATAAATACCTAACACTCCCGCCATC
ACAACTGGCACAATCGATTTCATTACAAGCTCTGGCCTCATCACTCCCAT
CGATGCTACGCCCACTCCACTCTTCGCCGTCCCATACGCCGCTCCCATGC
AGGAGAAAACAAGGGCAGCAGCGGCGCCGAGGAACCCGAAAAAAGGCGCC
GTTTCATCGCCACTGAATGCGGATGACATTTCAATTCCTCCTAAA
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