CB290800
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 6.239e-31 Identity = 78/212 (36.79%), Postives = 116/212 (54.72%), Query Frame = -1 Query: 238 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFA 873 G+ I++TTR + +M + + + L +++ W LF++ AF H + KL I ++I +KC G+PLAAK G LL KR + EW+ + DSE+W + + + +L L LSY+ LP + +++CF+YCAVFPKD + K LI LWMA +L + E +N L RSFFQE E KMHD++HD A Sbjct: 284 GASILITTRLEKIGSIMGTLQLYQLSNLSQEDCWLLFKQRAFC-HQTETSPKLMEIGKEIVKKCGGVPLAAKTLGGLLRFKREES---------EWEHVRDSEIWNLPQDENSVLPALRLSYHHLPLD--LRQCFAYCAVFPKDTKIEKEYLIALWMAHSFLLSKGNMELEDVGNEVWNELYLRSFFQEIEVKSGKTYF---KMHDLIHDLA 480
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30 Identity = 77/212 (36.32%), Postives = 111/212 (52.36%), Query Frame = -1 Query: 238 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFA 873 G+ ++ TTR V +M + + L +++ W LF + AF GH L I ++I +K G+PLAAK G +LC KR W+ + DS +W + + + +L L LSY+ LP + +K+CF+YCAVFPKD M K +LI+LWMA G+L + E + L RSFFQE E KMHD++HD A Sbjct: 285 GASVLTTTRLEKVGSIMGTLQPYELSNLSQEDCWLLFMQRAF-GHQEEINPNLVAIGKEIVKKSGGVPLAAKTLGGILCFKREERA---------WEHVRDSPIWNLPQDESSILPALRLSYHQLPLD--LKQCFAYCAVFPKDAKMEKEKLISLWMAHGFLLSKGNMELEDVGDEVWKELYLRSFFQEIEVKDGKTYF---KMHDLIHDLA 481
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.471e-29 Identity = 75/217 (34.56%), Postives = 119/217 (54.84%), Query Frame = -1 Query: 226 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYL-NAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVS 873 GS+I+VTTR+ VA +M + ++ +++PL + + WSLF + F ++ +A +I KC+GLPLA K G +L + V EW+R+L S +W + K LL L +SY LP++ +KRCF+YC++FPK + K +++ LWMA+G+L EYF+ L +RS Q+ + R MHD +++ AQF S Sbjct: 307 GSQILVTTRSQRVASIMCAVHVHNLQPLSDGDCWSLFMKTVFGNQEPCLNREIGDLAERIVHKCRGLPLAVKT---------LGGVLRFEGKVIEWERVLSSRIWDLPADKSNLLPVLRVSYYYLPAH--LKRCFAYCSIFPKGHAFEKDKVVLLWMAEGFLQQTRSSKNLEELGNEYFSELESRSLLQKTK--------TRYIMHDFINELAQFAS 504
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 5.839e-29 Identity = 91/280 (32.50%), Postives = 126/280 (45.00%), Query Frame = -1 Query: 34 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVSRKECLWVEINGTKELVINFFGEKVRHIGLNFQRGASFPMSFFEFDRLRSLLIYDTSHYNPSLFQ 873 G+ ++ TTR V +M + + L ++ W LF + AF GH L I ++I +KC G+PLAAK G +L KR EW+ + DS +W + + + +L L LSY+ LP + +++CF YCAVFPKD M K LI WMA G+L + E +N L RSFFQE E KMHD++HD A T N +R I N+ G + F E S Y+PSL Q Sbjct: 284 GAFVLTTTRLEKVGSIMGTLQPYELSNLSPEDCWFLFMQRAF-GHQEEINPNLMAIGKEIVKKCGGVPLAAKTLGGILRFKREER---------EWEHVRDSPIWNLPQDESSILPALRLSYHHLPLD--LRQCFVYCAVFPKDTKMAKENLIAFWMAHGFLLSKGNLELEDVGNEVWNELYLRSFFQEIEVESGKTYF---KMHDLIHDLA---------------TSLFSANTSSSNIREINANYD-GYMMSIGFAEV----------VSSYSPSLLQ 522
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.878e-27 Identity = 77/212 (36.32%), Postives = 109/212 (51.42%), Query Frame = -1 Query: 238 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFA 873 G+ I+ TTR V +M + + L + LF + AF G L I ++I +KC G+PLAAK G LL KR + EW+ + D+E+W + + + +L L LSY+ LP + +++CF+YCAVFPKD M K LI LWMA G+L + E +N L RSFFQE E K+HD++HD A Sbjct: 286 GASILATTRLEKVGSIMGTLQPYHLSNLSPHDSLLLFMQRAF-GQQKEANPNLVAIGKEIVKKCGGVPLAAKTLGGLLRFKREES---------EWEHVRDNEIWSLPQDESSILPALRLSYHHLPLD--LRQCFAYCAVFPKDTKMIKENLITLWMAHGFLLSKGNLELEDVGNEVWNELYLRSFFQEIEAKSGNTYF---KIHDLIHDLA 482
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: RPM1_ARATH (Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.807e-23 Identity = 73/225 (32.44%), Postives = 116/225 (51.56%), Query Frame = -1 Query: 217 GSKIVVTTRNVSVARMMRSTNIIS--IKPLPEDEFWSLFERFAFFGHSSVDR-EKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVE---EIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVSRKE 873 GS++++TTR+++VA I+ L EDE W LF AF R + LEPIAR++ +C+GLPLA G+++S+K +EW+++ + W++ E+K + + + LS+NDLP +KRCF YC++FP +Y M ++ LI +WMAQ ++ Y N L R+ Q KMHD++ + A VS+ E Sbjct: 307 GSRVMMTTRDMNVASFPYGIGSTKHEIELLKEDEAWVLFSNKAFPASLEQCRTQNLEPIARKLVERCQGLPLAIA---------SLGSMMSTKKFESEWKKVYSTLNWELNNNHELKI-VRSIMFLSFNDLPYP--LKRCFLYCSLFPVNYRMKRKRLIRMWMAQRFVEPIRGVKAEEVADSYLNELVYRNMLQVI-LWNPFGRPKAFKMHDVIWEIALSVSKLE 518
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL21_ARATH (Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.067e-22 Identity = 76/234 (32.48%), Postives = 118/234 (50.43%), Query Frame = -1 Query: 181 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVD--REKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYL-NAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVSRKECLWVEINGTKEL 873 GSKIV+TTR+ V+ + ++ I +K + +E W L RFAF G+ SV ++LE I ++IA +CKGLPLAA+ + L SK ++W + + +L L LSY+ LP +KRCF+ C++FPK + ++ EL+ LWMA L +Y L +SFFQ + + MHD+++D A+ VS C +E + E+ Sbjct: 302 GSKIVLTTRSEIVSTVAKAEKIYQMKLMTNEECWELISRFAF-GNISVGSINQELEGIGKRIAEQCKGLPLAARAIASHL---------RSKPNPDDWYAVSKN----FSSYTNSILPVLKLSYDSLPPQ--LKRCFALCSIFPKGHVFDREELVLLWMAIDLLYQPRSSRRLEDIGNDYLGDLVAQSFFQRLD-----ITMTSFVMHDLMNDLAKAVSGDFCFRLEDDNIPEI 514
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL3_ARATH (Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana GN=At1g15890 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.053e-22 Identity = 62/167 (37.13%), Postives = 91/167 (54.49%), Query Frame = -1 Query: 385 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVD-REKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRI---LDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLN 873 GSKIV TTR+ V R M + + LP DE W LF++ G + E + +AR++A KC GLPLA V G + + T V EWQ + L+S + +++ +L L SY+DL + VK CF YC++FP+DY + K ELI WM +G+++ Sbjct: 353 GSKIVFTTRSKDVCRDMEVDGEMKVDCLPPDEAWELFQKKV--GPIPLQSHEDIPTLARKVAEKCCGLPLALSVIGKAMASRET---------VQEWQHVIHVLNSSSHEFPSMEEKILPVLKFSYDDL-KDEKVKLCFLYCSLFPEDYEVRKEELIEYWMCEGFID 507
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: R13L4_ARATH (Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana GN=RPP13L4 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 8.452e-20 Identity = 64/225 (28.44%), Postives = 116/225 (51.56%), Query Frame = -1 Query: 217 GSKIVVTTRNVSVARMMRSTNIISIKP--LPEDEFWSLFERFAFFGHSSV-DREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQRILD---SEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNAXXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFAQFVSRKE 873 G ++VTTR+ SVA+ +++ + + +P L D W LF AF + +R +LE + ++I KCKGLPL K G L LL + +EW+RI + E+ +++ L LSY++LPS+ +K C +++P+D + K++L++ W+ +G++ + F+ L R + +K I+ CK+HD+V D +++K+ Sbjct: 289 GGSVIVTTRSESVAKRVQARDDKTHRPELLSPDNSWLLFCNVAFAANDGTCERPELEDVGKEIVTKCKGLPLTIKAVGGL--------LLCKDHVYHEWRRIAEHFQDELRGNTSETDNVMSSLQLSYDELPSH--LKSCILTLSLYPEDCVIPKQQLVHGWIGEGFVMWRNGRSATESGEDCFSGLTNRCLIEVVDK-TYSGTIITCKIHDMVRDLVIDIAKKD 502
BLAST of CB290800 vs. ExPASy Swiss-Prot
Match: DRL32_ARATH (Probable disease resistance protein At5g43730 OS=Arabidopsis thaliana GN=At5g43730 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.452e-20 Identity = 76/255 (29.80%), Postives = 117/255 (45.88%), Query Frame = -1 Query: 139 GSKIVVTTRNVSVARMMRSTNIISIKPLPEDEFWSLFERFAFFGHSSVDREKLEPIARQIARKCKGLPLAAKVTGNLLCDKRTGNLLSSKSIVNEWQR---ILDSEVWKVEEIKQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYNMNKRELINLWMAQGYLNA-XXXXXXXXXXXEYFNILATRSFFQEFEKXXXXXDILRCKMHDIVHDFA-----QFVSRKECLWVEINGTKELVINFFG-EKVRHIGL 873 GSKIV TTR+ V + M++ I + L DE W LF R + + +AR +A KC GLPLA V G + K T V EW+ +L+S K +++ +L L SY+ L N +K CF YC++FP+D+ + K +LI W+ +GY+N + +L E E + KMHD++ + A F +++E + V+ L+ N E VR + L Sbjct: 281 GSKIVFTTRSKEVCKHMKADKQIKVDCLSPDEAWELF-RLTVGDIILRSHQDIPALARIVAAKCHGLPLALNVIGKAMVCKET---------VQEWRHAINVLNSPGHKFPGMEERILPILKFSYDSL-KNGEIKLCFLYCSLFPEDFEIEKDKLIEYWICEGYINPNRYEDGGTNQGYDIIGLLVRAHLLIECELTD------KVKMHDVIREMALWINSDFGNQQETICVKSGAHVRLIPNDISWEIVRQMSL 518 The following BLAST results are available for this feature:
BLAST of CB290800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290800 ID=CB290800; Name=CB290800; organism=Citrus sinensis; type=EST; length=876bpback to top |