CB290806

Overview
NameCB290806
Unique NameCB290806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2418 contig Csv1_Contig2418:464..1302. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290806 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.490e-13
Identity = 39/107 (36.45%), Postives = 65/107 (60.75%), Query Frame = -2
Query:  252 YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYETVKSLQEKGHLPIPTQQQE 569
            YVH+ D+ L+HI +Y+ P A GRY+C+       E+V++L + +PEY IPTK     +   +P  FS++KL+++G EF   ++      V + + KG +PIP ++ E
Sbjct:  228 YVHLDDLCLSHIYLYKHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKG-IDDNLEPVHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKGLIPIPAEKTE 333          
BLAST of CB290806 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.490e-13
Identity = 43/114 (37.72%), Postives = 67/114 (58.77%), Query Frame = -2
Query:  246 YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYETVKSLQEKGHLPIP-----TQQQEES 569
            YVH+ D+ L+HI +YE P A GRY+C+       E+V++L + +PEY IPTK     +   +P  FS++KL+++G EF   ++      V + + KG +PIP     T+  EES
Sbjct:  228 YVHLDDLCLSHIYLYEHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKG-IDDNLEPVHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKGLIPIPIPAEKTEAAEES 340          
BLAST of CB290806 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.597e-12
Identity = 44/139 (31.65%), Postives = 78/139 (56.12%), Query Frame = -2
Query:  243 TVNASIIHILKYLNGSAKTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS--DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYE-TVKSLQEKGHLPIPTQQQEESV 647
            T   S+I  L  +NG+   Y+   Q  YVH+ D+   HI +YE P A GRY+C++      ++  ++ + +PEY +PT+ +  DE+ P      FS++KL D+G +F    + +++  + S +EKG LP  T + ++ +
Sbjct:  202 TFPPSLITALSLINGAESHYSIIKQGQYVHLDDLCECHIFLYENPEAKGRYICSKQDATIHQLARMIKQKWPEYHVPTQFAGIDEELP---TVSFSSKKLIDMGFKFKYDLEDMFKGAIDSCKEKGFLPYSTNEVKKGL 337          
BLAST of CB290806 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.927e-12
Identity = 37/101 (36.63%), Postives = 61/101 (60.40%), Query Frame = -2
Query:  270 YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCSDEKNPRKKPYKFSNQKLKDLGLEFT-PVKQCLYETVKSLQEKGHLPI 569
            +VH+ D+ ++HI +YE P A+GRY+ +       ++ ++L + +PEY +PTK  D K    +  +FS++KL DLG EF   +K      V+S + KG LP+
Sbjct:  244 FVHLDDLCMSHIFLYENPKANGRYIASACAATIYDIAKMLREEYPEYNVPTKFKDYKEDMGQ-VQFSSKKLTDLGFEFKYGLKDMYTAAVESCRAKGLLPL 343          
BLAST of CB290806 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.934e-11
Identity = 46/133 (34.59%), Postives = 71/133 (53.38%), Query Frame = -2
Query:  264 STVNASIIHILKYLNGSAKTYANSVQA-YVHVRDVALAHILVYETPSASGRYLCAESVLHRGEVVEILAKFFPEYPIPTKCS--DEKNPRKKPYKFSNQKLKDLGLEFTPVKQCLYE-TVKSLQEKGHLPIPT 650
            ST   S++  L  + G+   Y+   Q  YVH+ D+   HI +YE P A GRY+C+       ++ +I+   +PEY IPTK    DE+ P      FS++KL D G EF    + +++  + + +EKG LP  T
Sbjct:  201 STFPPSLVTALSLITGNEAHYSIIKQGQYVHLDDLCECHIYLYENPKAKGRYICSSHDATIHQLAKIIKDKWPEYYIPTKFPGIDEELP---IVSFSSKKLIDTGFEFKYNLEDMFKGAIDTCREKGLLPYST 330          
The following BLAST results are available for this feature:
BLAST of CB290806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
DFRA_PYRCO5.490e-1336.45Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_MALDO5.490e-1337.72Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_CALCH1.597e-1231.65Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]
DFRA_DIACA7.927e-1236.63Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
DFRA_GERHY3.934e-1134.59Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_01df08_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01df08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290806 ID=CB290806; Name=CB290806; organism=Citrus sinensis; type=EST; length=840bp
TTTTTTTTTTTTTACTAAAATTCTTTTCATTACATACTCATCCGTGGAAA
AAAAATACATTAACATAATTATTATTCAATCCCCTTAAAAAGTATGTTTT
GATGCAAAGACAAACAAAACAAATACAAAATTAGGAAACACTTTCTTATT
TTTTGCTTAGTTGCTACAATTTTCATATGAACTTGTTGCTACCAAATTTG
TGGCAGCTCGTGCGATCAATTCGATAACTAAGATTGAATTTTCACTGATT
CTTCTTGTTGTTGTGTAGGGATTGGAAGGTGACCCTTCTCCTGCAAGCTC
TTTACGGTCTCGTATAGGCATTGCTTCACCGGTGTAAATTCTAACCCAAG
ATCCTTGAGCTTTTGGTTTGAAAACTTGTAGGGTTTTTTTCTGGGGTTCT
TTTCATCCGAACATTTGGTGGGGATAGGATATTCAGGGAAGAACTTAGCC
AGAATCTCCACCACCTCGCCGCGGTGGAGCACGCTTTCGGCGCAGAGGTA
ACGGCCGGAGGCAGATGGAGTCTCATAGACAAGAATGTGGGCTAATGCCA
CATCCCTAACGTGCACATATGCCTGAACTGAATTAGCATAAGTCTTTGCT
GAGCCATTTAAGTACTTAAGAATGTGAATAATGCTAGCATTCACAGTTGA
TTGCAACAATGGCCCTAGCACCAACACTGGGTTCACCACCACCAGGTCCA
CCCCTCTTGCCACCGCCTCCTCCCACGCCGCCTTCTCCGCCACGGCTTTT
CCGTAGCAATACCAGTTCTTGGTGTTTTTGCAAAAACTCAAGATCACTCC
AGCAAGATTCATCAACAACATCATCAGGGCTCCGGGTGGG
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