CB290844

Overview
NameCB290844
Unique NameCB290844
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290844 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.386e-79
Identity = 142/144 (98.61%), Postives = 142/144 (98.61%), Query Frame = -3
Query:  364 AVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVAHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 795
            AVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHV HSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMR LANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Sbjct:  351 AVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of CB290844 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 6.467e-61
Identity = 106/144 (73.61%), Postives = 124/144 (86.11%), Query Frame = -3
Query:  364 AVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVAHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 795
            AVNQRDADL+HFWDK+RKAPEG+P+K EA+KQ  E MSHRMH+  S++L+GKLLFGIEK PE+LN VRPAG  LVDDW CLK++VRTFE+HCG+LSQYGMKHMR  AN+CN GI KE+M EASAQAC  IP+ PWSSL +GFSA
Sbjct:  341 AVNQRDADLVHFWDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of CB290844 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.906e-59
Identity = 104/144 (72.22%), Postives = 124/144 (86.11%), Query Frame = -3
Query:  364 AVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVAHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 795
            AVNQRDADL+HFW+K+RKAPEG+ +K EA+KQ  EAMSHR H+ +S+KLIG+LLFGIEKG E+L+ VRPAG PLVD+W CLK++V+TFE+HCG+LSQYGMKHMR  ANICN GI  E MAEASAQAC +IP+ PWSSL  GFSA
Sbjct:  350 AVNQRDADLIHFWEKFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of CB290844 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.923e-58
Identity = 100/142 (70.42%), Postives = 121/142 (85.21%), Query Frame = -3
Query:  364 NQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVAHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 789
            NQRDADL+HFW+KYRKAPEG+ RK EAQKQ  EAMSHR+H+ +S+ L+GK+LFGI +GPE+LN VR AGQPLVDDW CLK+ VR FE HCG+LSQYG+KHMR  ANICN GI  E+M EA++QAC  +P+GPWSSL++GFSA
Sbjct:  353 NQRDADLVHFWEKYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of CB290844 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.015e-54
Identity = 100/142 (70.42%), Postives = 117/142 (82.39%), Query Frame = -3
Query:  364 NQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVAHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 789
            NQRDADL+HFW KY+KAPEG+ RK EAQKQ  EAMSHR+HV +SI LIG LLFG+E G  +LN VRP+G+PLVDDW CLKSLVR FE HCG+LSQYG+KHMR +AN+CN GI   +M EA+ QAC  IP+ PWSSLD+GFSA
Sbjct:  338 NQRDADLVHFWHKYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of CB290844 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.714e-37
Identity = 73/143 (51.05%), Postives = 96/143 (67.13%), Query Frame = -3
Query:  364 VNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVAHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 792
            VNQRDA+L   W  Y+++  G+ +K E  +Q  +A+ HR H+  S++LIG LLFG +K   IL +VR  G PLVDDWGCLKS+VR FE+ CG+L+QYGMKHMR  ANICN G+    M EA   AC    +G W   ++G+SA
Sbjct:  355 VNQRDAELHFMWQLYKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of CB290844 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.200e-36
Identity = 70/143 (48.95%), Postives = 94/143 (65.73%), Query Frame = -3
Query:  364 VNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVAHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 792
            VNQRDA+L   W  Y+++   +  K +  KQ  E + HR H+  S++LIG LL+G  KG  +L +VR  G  LVDDW CLKS+VR FE+HCG L+QYGMKHMR  ANICN+G+ +  M EA   ACE   +G +   ++G+SA
Sbjct:  353 VNQRDAELFLLWQMYQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of CB290844 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.358e-34
Identity = 69/143 (48.25%), Postives = 94/143 (65.73%), Query Frame = -3
Query:  364 VNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVAHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 792
            VNQRDA+LL  W  Y+++     +K +  KQ  E + HR H+  S++LIG LL+G EK   +L +VR  G PLVDDW CLKS+VR +E+HCG+L+QYGMKHMR  ANICN+G+ +  M +A   AC    +G     + G+SA
Sbjct:  351 VNQRDAELLFMWQVYQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of CB290844 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 3.951e-34
Identity = 69/126 (54.76%), Postives = 85/126 (67.46%), Query Frame = -3
Query:  415 VNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVAHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQAC 792
            VNQRDADLL  W  YR + +G+ +K +  K+  E   HR H+  S++LI  +LFG      +LN VR  G PLVDDW CLKS+VR FE HCG+L+QYGMKHMR  AN+CN G+ KE M EAS  AC
Sbjct:  344 VNQRDADLLFLWHMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPTMN--VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
BLAST of CB290844 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.951e-34
Identity = 68/143 (47.55%), Postives = 92/143 (64.34%), Query Frame = -3
Query:  364 VNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVAHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRFLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 792
            VNQRDA+LL  W  Y+++     +K    +Q  E + HR H+  S++LIG LL+G  K   +L++VR  G PLVDDW CLKS+VR FE+HCG+L+QYGMKHMR   N+CN+G+ K  M EA   AC    +G     + G+SA
Sbjct:  333 VNQRDAELLFMWQMYQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
The following BLAST results are available for this feature:
BLAST of CB290844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI1.386e-7998.61Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU6.467e-6173.61Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_VICSA7.906e-5972.22Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEG_ARATH3.923e-5870.42Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPEA_ARATH2.015e-5470.42Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO1.714e-3751.05Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN7.200e-3648.95Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU1.358e-3448.25Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEB_ARATH3.951e-3454.76Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
LEGU_CANEN3.951e-3447.55Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_01dh06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dh06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290844 ID=CB290844; Name=CB290844; organism=Citrus sinensis; type=EST; length=797bp
TTTTTTTTTTTTTTTTTAAACCAAAATTAAAGCCTTTATTTCAATATTTA
GAGCAACACCACGAAGAGGGTTGAGTTGCACGGTCTACAAATCAGGAACA
AATATAGCTACATAAGCATAAAATAGCATCGCATACATCCAAAATATATA
CTATCAAATTACAACTGCGGTCTGGCAGGGAAAAGCTTTTAAATATAATA
ATTACAAGGAAGCAATCACCAGCCAAATGAAAATAAACATTGCCATAAAT
GGAAGCAATCATCAGCCAAATGAAAATAGATATTGCCATATTGGCGACTA
TAATGAAAACTAACATATTTCAAGAACTGGCTTATGATATTCGCACAGTT
CTCGGCTTCTTTATGCACTGAATCCTTTGTCGAGAGAACTCCAAGGACCA
GAAGGAATATTTTCACAGGCTTGGGCTGATGCTTCCGCCATCTTCTCTTT
CCCAATTCCTGTATTACAGATGTTTGCAAGAAAACGCATGTGCTTCATTC
CATATTGCGATAGAGCTCCACAGTGCGACTCAAAAGTCCTCACCAGTGAT
TTGAGGCAGCCCCAGTCATCAACAAGAGGCTGACCAGCAGGTCGAACAGT
GTTCAAGATCTCTGGACCTTTCTCAATTCCAAATAAGAGCTTTCCAATAA
GTTTGATGCTGTGGGCTACATGCATTCTATGAGACATTGCTTCAAAAAAC
TGCTTCTGAGCTTCAGCCTTCCTAGGAGTGCCCTCAGGTGCCTTGCGGTA
CTTGTCCCAAAAATGCAAGAGATCGGCATCTCGCTGGTTAACAGCTT
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