CB290848

Overview
NameCB290848
Unique NameCB290848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290848 vs. ExPASy Swiss-Prot
Match: APXT_ARATH (L-ascorbate peroxidase T, chloroplastic OS=Arabidopsis thaliana GN=APXT PE=2 SV=2)

HSP 1 Score: 257.684 bits (657), Expect = 5.644e-68
Identity = 123/144 (85.42%), Postives = 134/144 (93.06%), Query Frame = -2
Query:  379 RMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDGAAPEKFVAAKYSSGK 810
            RMGL+DKEIVALSGAHT+GR+RP+RSGWGKPETKYTK GPG  GGQSWTV+WLKFDNSYFKDIKE+RD+DLLVLPTDA LFEDPSFK YAEKYAED  AFFKDYAEAHAKLSNLGAKFDPPEGIV+++   PEKFVAAKYS+GK
Sbjct:  226 RMGLDDKEIVALSGAHTLGRARPDRSGWGKPETKYTKTGPGEAGGQSWTVKWLKFDNSYFKDIKEKRDDDLLVLPTDAALFEDPSFKNYAEKYAEDVAAFFKDYAEAHAKLSNLGAKFDPPEGIVIEN--VPEKFVAAKYSTGK 367          

HSP 2 Score: 75.0998 bits (183), Expect = 5.155e-13
Identity = 34/50 (68.00%), Postives = 44/50 (88.00%), Query Frame = -3
Query:   72 QSELSEAMKQKIRAEYEAVGGSPDTPLRSNYFLNIMIVVAVLALLTSLFG 221
            + ELS++MK+KIRAEYEA+GGSPD PL +NYFLNI+I + VL LL++LFG
Sbjct:  367 KKELSDSMKKKIRAEYEAIGGSPDKPLPTNYFLNIIIAIGVLVLLSTLFG 416          
BLAST of CB290848 vs. ExPASy Swiss-Prot
Match: APX8_ORYSJ (Probable L-ascorbate peroxidase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=APX8 PE=2 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 1.064e-66
Identity = 119/134 (88.81%), Postives = 127/134 (94.78%), Query Frame = -2
Query:  409 RMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDGAAPEK 810
            RMGL+DKEIVALSGAHT+GRSRP+RSGWGKPETKYTKDGPG PGGQSWTV+WLKFDNSYFKDIKE+RD+DLLVLPTDA LFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLS+LGAKFDPPEG  LDD  A E+
Sbjct:  231 RMGLDDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGEPGGQSWTVEWLKFDNSYFKDIKEQRDQDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSDLGAKFDPPEGFSLDDEPAVEE 364          

HSP 2 Score: 75.0998 bits (183), Expect = 5.155e-13
Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = -3
Query:   69 QSELSEAMKQKIRAEYEAVGGSPDTPLRSNYFLNIMIVVAVLALLTSLFGN 221
            + ELS++MKQKIRAEYE  GGSPD PL+SNYFLNIM+++  LA LTSL G+
Sbjct:  428 KKELSDSMKQKIRAEYEGFGGSPDKPLQSNYFLNIMLLIGGLAFLTSLLGS 478          
BLAST of CB290848 vs. ExPASy Swiss-Prot
Match: APX6_ORYSJ (Probable L-ascorbate peroxidase 6, chloroplastic OS=Oryza sativa subsp. japonica GN=APX6 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.899e-64
Identity = 115/127 (90.55%), Postives = 123/127 (96.85%), Query Frame = -2
Query:  430 RMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLD 810
            RMGL+DKEIVALSGAHT+GRSRPERSGWGKPETKYTK+GPGAPGGQSWT QWLKFDNSYFKDIKERRDEDLLVLPTDAVLFED SFK+YAEKYA DQ+AFF+DYAEAHAKLSNLGAKFDPP+GI L+
Sbjct:  183 RMGLSDKEIVALSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTSQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDSSFKIYAEKYAADQDAFFEDYAEAHAKLSNLGAKFDPPKGISLE 309          
BLAST of CB290848 vs. ExPASy Swiss-Prot
Match: APX7_ORYSJ (Probable L-ascorbate peroxidase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=APX7 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.439e-63
Identity = 112/127 (88.19%), Postives = 121/127 (95.28%), Query Frame = -2
Query:  430 RMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLD 810
            RMGL+DKEIV LSGAHT+GRSRPERSGWGKPETKYTK+GPGAPGGQSWT +WLKFDNSYFK+IKE+RD+DLLVLPTDA LFEDP+FKVYAEKYAEDQEAFFKDYA AHAKLSNLGAKF+PPEG  LD
Sbjct:  232 RMGLDDKEIVVLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDPTFKVYAEKYAEDQEAFFKDYAGAHAKLSNLGAKFNPPEGFTLD 358          
BLAST of CB290848 vs. ExPASy Swiss-Prot
Match: APX5_ORYSJ (Probable L-ascorbate peroxidase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=APX5 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 9.325e-63
Identity = 111/127 (87.40%), Postives = 124/127 (97.64%), Query Frame = -2
Query:  430 RMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLD 810
            RMGL+DKEIVALSGAHT+GR+RPERSGWGKPETKYT++GPGAPGGQSWT +WLKFDNSYFK+IKERRDEDLLVLPTDAVLFED SFK++AEKYAEDQ+AFF+DYAEAHAKLSNLGAKFDPP+GI L+
Sbjct:  194 RMGLSDKEIVALSGAHTLGRARPERSGWGKPETKYTENGPGAPGGQSWTSEWLKFDNSYFKEIKERRDEDLLVLPTDAVLFEDSSFKIHAEKYAEDQDAFFEDYAEAHAKLSNLGAKFDPPKGISLE 320          
BLAST of CB290848 vs. ExPASy Swiss-Prot
Match: APXS_ARATH (L-ascorbate peroxidase S, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=APXS PE=1 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 1.347e-61
Identity = 109/126 (86.51%), Postives = 121/126 (96.03%), Query Frame = -2
Query:  433 RMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVL 810
            RMGL+DK+IVALSGAHT+GRSRPERSGWGKPETKYTK+GPGAPGGQSWT +WLKFDNSYFK+IKE+RDEDLLVLPTDA +FED SFKVYAEKYA DQ+AFFKDYA AHAKLSNLGA+F+PPEGIV+
Sbjct:  247 RMGLDDKDIVALSGAHTLGRSRPERSGWGKPETKYTKEGPGAPGGQSWTPEWLKFDNSYFKEIKEKRDEDLLVLPTDAAIFEDSSFKVYAEKYAADQDAFFKDYAVAHAKLSNLGAEFNPPEGIVI 372          
BLAST of CB290848 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.347e-28
Identity = 68/143 (47.55%), Postives = 90/143 (62.94%), Query Frame = -2
Query:  382 RMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDGAAPEKFVAAKYSSG 810
            RMGL+DK+IVALSG HT+G++RPERSG+         DG       +WT   LKFDNSYF ++ +   E LL LPTD  L EDP+F+ Y E YA+D++AFF+DYAE+H KLS LG  F PP    +       K +  + ++G
Sbjct:  146 RMGLSDKDIVALSGGHTLGKARPERSGF---------DG-------AWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELG--FTPPRSAFIYKSCQKPKSLLMQTAAG 270          
BLAST of CB290848 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.347e-28
Identity = 68/143 (47.55%), Postives = 90/143 (62.94%), Query Frame = -2
Query:  382 RMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDGAAPEKFVAAKYSSG 810
            RMGL+DK+IVALSG HT+G++RPERSG+         DG       +WT   LKFDNSYF ++ +   E LL LPTD  L EDP+F+ Y E YA+D++AFF+DYAE+H KLS LG  F PP    +       K +  + ++G
Sbjct:  146 RMGLSDKDIVALSGGHTLGKARPERSGF---------DG-------AWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELG--FTPPRSAFIYKSCQKPKSLLMQTAAG 270          
BLAST of CB290848 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.834e-27
Identity = 65/120 (54.17%), Postives = 81/120 (67.50%), Query Frame = -2
Query:  451 RMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDP 810
            RMGL+DK+IVALSG HT+GR+ PERSG+         DGP       WT + LKFDNSYF ++ +   E LL LPTD  L EDP F+   E YA+D++AFF+DYAE+H KLS LG  F+P
Sbjct:  145 RMGLSDKDIVALSGGHTLGRAHPERSGF---------DGP-------WTQEPLKFDNSYFVELLKGESEGLLKLPTDKTLLEDPEFRRLVELYAKDEDAFFRDYAESHKKLSELG--FNP 246          
BLAST of CB290848 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.406e-26
Identity = 63/115 (54.78%), Postives = 77/115 (66.96%), Query Frame = -2
Query:  466 RMGLNDKEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLG 810
            RMGL+DK+IVALSG HT+GR+ PERSG+            GA     WT + LKFDNSYF ++ +   E LL LPTD  L EDPSF+ Y + YA D++ FFKDYAE+H KLS LG
Sbjct:  145 RMGLSDKDIVALSGGHTLGRAHPERSGF-----------EGA-----WTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYVDLYARDEDTFFKDYAESHKKLSELG 243          
The following BLAST results are available for this feature:
BLAST of CB290848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
APXT_ARATH5.644e-6885.42L-ascorbate peroxidase T, chloroplastic OS=Arabido... [more]
APX8_ORYSJ1.064e-6688.81Probable L-ascorbate peroxidase 8, chloroplastic O... [more]
APX6_ORYSJ2.899e-6490.55Probable L-ascorbate peroxidase 6, chloroplastic O... [more]
APX7_ORYSJ1.439e-6388.19Probable L-ascorbate peroxidase 7, chloroplastic O... [more]
APX5_ORYSJ9.325e-6387.40Probable L-ascorbate peroxidase 5, chloroplastic O... [more]
APXS_ARATH1.347e-6186.51L-ascorbate peroxidase S, chloroplastic/mitochondr... [more]
APX3_ORYSJ3.347e-2847.55Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI3.347e-2847.55Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ARATH4.834e-2754.17L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX4_ORYSJ1.406e-2654.78Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01dh08_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01dh08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290848 ID=CB290848; Name=CB290848; organism=Citrus sinensis; type=EST; length=811bp
TTTTTTTTTTTTTAAATTCAACAAAAGATGCTATTAAAAAACATTTATAA
ACTACAAAATCCAAGCTAATTTCCAAAGAGAGACGTCAAAAGTGCCAAAA
CAGCAACCACAATCATAATATTCAGGAAATAGTTTGACCGTAGAGGTGTA
TCTGGGCTTCCACCAACGGCTTCATACTCTGCCCGTATCTTCTGCTTCAT
AGCCTCTGACAGCTCACTCTGCAATTCAAATAGCCAACACTAATTGAATT
TTATTCTTTCACCTTCACTTAGACTTCCAAGTTTTAGGTGTGAAGCACAC
ACAGGATTTCAAAAAACCTTCATCTTGTATTATTATAACATACGGCACAA
GAAAACAAAGTTACTTGTTTTTTCAGTCCTTTCCGGACGAATACTTGGCT
GCTACAAACTTCTCTGGAGCAGCACCATCATCTAGCACGATACCCTCAGG
AGGGTCAAATTTTGCCCCAAGGTTGCTGAGTTTGGCATGGGCTTCAGCAT
AATCCTTAAAGAATGCTTCCTGATCCTCAGCATATTTCTCAGCATAAACC
TTGAATGAAGGATCTTCAAAAAGAACAGCATCAGTAGGCAGCACGAGTAA
ATCTTCGTCCCTTCTTTCTTTAATATCCTTGAAGTAGGAGTTGTCAAATT
TCAACCATTGTACTGTCCAGGACTGCCCACCAGGTGCTCCTGGTCCATCT
TTCGTGTACTTTGTTTCTGGCTTGCCCCAACCACTTCGTTCAGGTCTAGA
CCTTCCCACTGTGTGTGCACCAGATAAGGCAACTATTTCCTTGTCATTTA
ATCCCATTCTA
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