CB290856

Overview
NameCB290856
Unique NameCB290856
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_ARATH (Agmatine deiminase OS=Arabidopsis thaliana GN=AIH PE=1 SV=2)

HSP 1 Score: 301.597 bits (771), Expect = 2.294e-81
Identity = 143/189 (75.66%), Postives = 163/189 (86.24%), Query Frame = -1
Query:   81 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPAIPTNAGK 647
            K QIE ELK YLGV   IWLPRGL+GD+DTNGHIDNMCCF++PGVVLLSWTDD+TDPQYERSVEAL++LS++ DARGRK+Q+IKL++P PLYMTEEE++G+ QDGEA PRLAGTRLAASYVNFYIANGGIIAPQFGD   D EA+ VL   FP + VVGIE AREIVL GGNIHC TQQQPA PT+  +
Sbjct:  192 KEQIEEELKKYLGVQSFIWLPRGLYGDEDTNGHIDNMCCFARPGVVLLSWTDDETDPQYERSVEALSVLSNSIDARGRKIQVIKLYIPEPLYMTEEESSGITQDGEAIPRLAGTRLAASYVNFYIANGGIIAPQFGDPIRDKEAIRVLSDTFPHHSVVGIENAREIVLAGGNIHCITQQQPAEPTSVAE 380          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_PSEAE (Agmatine deiminase OS=Pseudomonas aeruginosa GN=aguA PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.894e-51
Identity = 100/182 (54.95%), Postives = 131/182 (71.98%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            + +IE  L+ YL V  IIWLP GL+ +D+T+GH+DN CC+++PG VLL+WTDD+ DP Y R   AL +L ++ DA+GRKL + K+ +PGPLY T+EE  G++    ++PR    RLA SYVNF I NGGIIAP F D K D EA  +L + FP++EVV +   REI+LGGGNIHC TQQQPA
Sbjct:  186 QAEIERTLRDYLAVESIIWLPNGLY-NDETDGHVDNFCCYARPGEVLLAWTDDQDDPNYLRCQAALRVLEESRDAKGRKLVVHKMPIPGPLYATQEECDGVDIVEGSQPRDPSIRLAGSYVNFLIVNGGIIAPSFDDPK-DAEARAILQRVFPEHEVVMVP-GREILLGGGNIHCITQQQPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_PSEA8 (Agmatine deiminase OS=Pseudomonas aeruginosa (strain LESB58) GN=aguA PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.219e-51
Identity = 100/182 (54.95%), Postives = 130/182 (71.43%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            + +IE  L+ YL V  IIWLP GL+ +D+T+GH+DN CC+ +PG VLL+WTDD+ DP Y R   AL +L ++ DA+GRKL + K+ +PGPLY T+EE  G++    ++PR    RLA SYVNF I NGGIIAP F D K D EA  +L + FP++EVV +   REI+LGGGNIHC TQQQPA
Sbjct:  186 QAEIERTLRDYLAVESIIWLPNGLY-NDETDGHVDNFCCYVRPGEVLLAWTDDQDDPNYLRCQAALRVLEESRDAKGRKLVVHKMPIPGPLYATQEECDGVDIVEGSQPRDPSIRLAGSYVNFLIVNGGIIAPSFDDPK-DAEARAILQRVFPEHEVVMVP-GREILLGGGNIHCITQQQPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_PSEAB (Agmatine deiminase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=aguA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.399e-51
Identity = 99/180 (55.00%), Postives = 129/180 (71.67%), Query Frame = -1
Query:  102 QIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 641
            +IE  L+ YL V  IIWLP GL+ +D+T+GH+DN CC+ +PG VLL+WTDD+ DP Y R   AL +L ++ DA+GRKL + K+ +PGPLY T+EE  G++    ++PR    RLA SYVNF I NGGI+AP F D K D EA  +L + FP++EVV +   REI+LGGGNIHC TQQQPA
Sbjct:  188 EIERTLRDYLAVDSIIWLPNGLY-NDETDGHVDNFCCYVRPGEVLLAWTDDQDDPNYLRCQAALRVLEESRDAKGRKLVVHKMPIPGPLYATQEECDGVDIVEGSQPRDPSIRLAGSYVNFLIVNGGIVAPSFDDPK-DAEARAILQRVFPEHEVVMVP-GREILLGGGNIHCITQQQPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_PSEA7 (Agmatine deiminase OS=Pseudomonas aeruginosa (strain PA7) GN=aguA PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.571e-50
Identity = 99/182 (54.40%), Postives = 130/182 (71.43%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            + +IE  L+ +L V  IIWLP GL+ +D+T+GH+DN CC+ +PG VLL+WTDD+ DP Y R   AL IL ++ DA+GRKL + K+ +PGPLY T+EE  G++    ++PR    RLA SYVNF I NGGI+AP F D K D EA  +L + FP++EVV +   REI+LGGGNIHC TQQQPA
Sbjct:  186 QAEIEGILRDHLAVDSIIWLPNGLY-NDETDGHVDNFCCYVRPGEVLLAWTDDQDDPNYLRCQAALRILEESRDAKGRKLVVHKMPIPGPLYATQEECDGVDIVEGSQPRDPSIRLAGSYVNFLIVNGGIVAPSFDDPK-DAEARAILQRVFPEHEVVMVP-GREILLGGGNIHCITQQQPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA1_LISMO (Putative agmatine deiminase 1 OS=Listeria monocytogenes GN=aguA1 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.772e-49
Identity = 102/181 (56.35%), Postives = 131/181 (72.38%), Query Frame = -1
Query:  105 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQP 647
            K QIE  LK YL + KIIWL RG++ D+ TNGH+DN+  + +PGVV L+WTDD+TDPQYE S E   ILS+ TDA+GRKL++ K++VP P+ +T+EE+ G++      PR  G RLAASY+N+Y ANGG+I P FGD   D  A   L Q +P  EVVG+ +AREI+LGGGNIHC TQQ P
Sbjct:  185 KQQIEMVLKEYLNLEKIIWLKRGIYLDE-TNGHVDNIFNYVRPGVVALAWTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVIFPLFGDPN-DELAREKLQQLYPNCEVVGV-KAREILLGGGNIHCITQQVP 362          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA1_LISMF (Putative agmatine deiminase 1 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=aguA1 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.315e-49
Identity = 101/181 (55.80%), Postives = 131/181 (72.38%), Query Frame = -1
Query:  105 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQP 647
            K QIE  LK YL + KIIWL RG++ D+ TNGH+DN+  + +PGVV L+WTDD+TDPQYE S E   ILS+ TDA+GRKL++ K++VP P+ +T+EE+ G++      PR  G RLAASY+N+Y ANGG++ P FGD   D  A   L Q +P  EVVG+ +AREI+LGGGNIHC TQQ P
Sbjct:  185 KQQIEMVLKEYLNLEKIIWLKRGIYLDE-TNGHVDNIFNYVRPGVVALAWTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVVFPLFGDPN-DELAREKLRQLYPNCEVVGV-KAREILLGGGNIHCITQQVP 362          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_YERPS (Putative agmatine deiminase OS=Yersinia pseudotuberculosis GN=aguA PE=3 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 3.949e-49
Identity = 105/182 (57.69%), Postives = 126/182 (69.23%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            + QIE  L  YLGV   IWL  G++ +D+T+GHIDNMCCF +PG V L WTDD+ DPQY RSV A  +LS+  DA+GRKL+I KL  PGPLY TEEE   +    +A PR AG RLA SYVNF I+N  II P   D + DG+A  +L Q FP Y +VG+  AREI+LGGGNIHC TQQ PA
Sbjct:  187 QAQIEQLLCDYLGVTHFIWLQDGVY-NDETDGHIDNMCCFVRPGEVALHWTDDQQDPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNTEEETFDV-LTSDAVPRTAGERLAGSYVNFLISNQQIIFPLL-DSRTDGQANDLLQQMFPGYAIVGVP-AREILLGGGNIHCITQQIPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_YERPE (Putative agmatine deiminase OS=Yersinia pestis GN=aguA PE=3 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 3.949e-49
Identity = 105/182 (57.69%), Postives = 126/182 (69.23%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            + QIE  L  YLGV   IWL  G++ +D+T+GHIDNMCCF +PG V L WTDD+ DPQY RSV A  +LS+  DA+GRKL+I KL  PGPLY TEEE   +    +A PR AG RLA SYVNF I+N  II P   D + DG+A  +L Q FP Y +VG+  AREI+LGGGNIHC TQQ PA
Sbjct:  187 QAQIEQLLCDYLGVTHFIWLQDGVY-NDETDGHIDNMCCFVRPGEVALHWTDDQQDPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNTEEETFDV-LTSDAVPRTAGERLAGSYVNFLISNQQIIFPLL-DSRTDGQANDLLQQMFPGYAIVGVP-AREILLGGGNIHCITQQIPA 364          
BLAST of CB290856 vs. ExPASy Swiss-Prot
Match: AGUA_YERP3 (Putative agmatine deiminase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=aguA PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.949e-49
Identity = 105/182 (57.69%), Postives = 126/182 (69.23%), Query Frame = -1
Query:  102 KGQIENELKAYLGVMKIIWLPRGLFGDDDTNGHIDNMCCFSKPGVVLLSWTDDKTDPQYERSVEALTILSDATDARGRKLQIIKLHVPGPLYMTEEEAAGLNQDGEAKPRLAGTRLAASYVNFYIANGGIIAPQFGDKKWDGEAVGVLFQAFPKYEVVGIERAREIVLGGGNIHCFTQQQPA 647
            + QIE  L  YLGV   IWL  G++ +D+T+GHIDNMCCF +PG V L WTDD+ DPQY RSV A  +LS+  DA+GRKL+I KL  PGPLY TEEE   +    +A PR AG RLA SYVNF I+N  II P   D + DG+A  +L Q FP Y +VG+  AREI+LGGGNIHC TQQ PA
Sbjct:  187 QAQIEQLLCDYLGVTHFIWLQDGVY-NDETDGHIDNMCCFVRPGEVALHWTDDQQDPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNTEEETFDV-LTSDAVPRTAGERLAGSYVNFLISNQQIIFPLL-DSRTDGQANDLLQQMFPGYAIVGVP-AREILLGGGNIHCITQQIPA 364          
The following BLAST results are available for this feature:
BLAST of CB290856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
AGUA_ARATH2.294e-8175.66Agmatine deiminase OS=Arabidopsis thaliana GN=AIH ... [more]
AGUA_PSEAE1.894e-5154.95Agmatine deiminase OS=Pseudomonas aeruginosa GN=ag... [more]
AGUA_PSEA84.219e-5154.95Agmatine deiminase OS=Pseudomonas aeruginosa (stra... [more]
AGUA_PSEAB9.399e-5155.00Agmatine deiminase OS=Pseudomonas aeruginosa (stra... [more]
AGUA_PSEA73.571e-5054.40Agmatine deiminase OS=Pseudomonas aeruginosa (stra... [more]
AGUA1_LISMO1.772e-4956.35Putative agmatine deiminase 1 OS=Listeria monocyto... [more]
AGUA1_LISMF2.315e-4955.80Putative agmatine deiminase 1 OS=Listeria monocyto... [more]
AGUA_YERPS3.949e-4957.69Putative agmatine deiminase OS=Yersinia pseudotube... [more]
AGUA_YERPE3.949e-4957.69Putative agmatine deiminase OS=Yersinia pestis GN=... [more]
AGUA_YERP33.949e-4957.69Putative agmatine deiminase OS=Yersinia pseudotube... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02aa04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02aa04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290856 ID=CB290856; Name=CB290856; organism=Citrus sinensis; type=EST; length=647bp
AAAACACTCATGCTCCATCTGGAGAACCACGCTGCTGCCTCTGAGGTCAG
AGTTATAATTTCAGAATCTAATCAATCTAACTTCCCAGCATTTGTTGGAA
TGGCTGGTTGTTGTTGAGTAAAGCAATGTATATTTCCACCTCCCAAAACA
ATTTCCCTTGCTCTTTCAATTCCTACCACTTCATACTTAGGAAAGGCTTG
AAACAGGACACCAACAGCTTCACCGTCCCACTTTTTGTCCCCAAACTGGG
GTGCGATGATTCCTCCATTTGCAATGTAAAAATTCACATATGAAGCAGCA
AGTCTTGTACCCGCAAGTCTTGGTTTAGCCTCACCATCCTGATTAAGTCC
AGCAGCTTCTTCTTCTGTCATATAAAGTGGCCCTGGTACATGAAGTTTAA
TTATTTGTAATTTCCGACCTCTGGCATCAGTAGCATCAGAGAGAATAGTC
AACGCCTCCACAGATCGTTCGTACTGAGGATCTGTTTTATCATCAGTCCA
AGACAGTAACACCACACCAGGCTTTGAAAAACAGCACATATTGTCAATAT
GGCCATTAGTATCATCATCACCAAATAATCCACGAGGCAACCATATAATC
TTCATGACTCCAAGATATGCCTTAAGTTCGTTCTCTATTTGTCCTTT
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