CB290861

Overview
NameCB290861
Unique NameCB290861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 5.660e-66
Identity = 127/158 (80.38%), Postives = 131/158 (82.91%), Query Frame = -3
Query:   72 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVA+GLARRCIVQVSY IGVP+PLSVFVDSYGTGKIPDKEILKIVKENFDFRPG I+IN DLKRGGNGRFLKTAAYG FGRDDPDF WE+V P K EK
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 390          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 5.660e-66
Identity = 127/158 (80.38%), Postives = 131/158 (82.91%), Query Frame = -3
Query:   72 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVASGLARRCIVQVSY IGVP+PLSVFVD+YGTGKIPDKEILKIVKENFDFRPG +SIN DLKRGGNGRFLKTAAYG FGRDDPDF WE+V P K EK
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMSINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 390          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 9.654e-66
Identity = 127/161 (78.88%), Postives = 132/161 (81.99%), Query Frame = -3
Query:   63 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EKFPA 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVA+GLARRCIVQVSY IGVP+PLSVFVD+YGTGKIPD+EILKIVKENFDFRPG ISIN DLKRGGNGRFLKTAAYG FGRDDPDF WE+V P K EK  A
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKTQA 393          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 9.654e-66
Identity = 128/158 (81.01%), Postives = 130/158 (82.28%), Query Frame = -3
Query:   72 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVA+GLARRCIVQVSY IGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPG I+IN DLKRGGN RFLKTAAYG FGRDDPDF WEIV P K EK
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNDRFLKTAAYGHFGRDDPDFTWEIVKPLKWEK 390          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.261e-65
Identity = 126/161 (78.26%), Postives = 132/161 (81.99%), Query Frame = -3
Query:   63 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EKFPA 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVASGLARRCIVQVSY IGVP+PLSVFVDSYGTGKIPD+EILKIVKENFDFRPG IS+N DLKRGGNGRFLKTAAYG FGR+DPDF WE+V P K +K  A
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILKIVKENFDFRPGMISVNLDLKRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWDKVQA 393          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 4.791e-65
Identity = 126/161 (78.26%), Postives = 131/161 (81.37%), Query Frame = -3
Query:   63 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EKFPA 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVASGLARRCIVQVSY IGVP+PLSVFVD+YGTGKIPDKEILKIVKENFDFRPG I+IN DLKRGGN RFLKTAAYG FGR+DPDF WE+V P K EK  A
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKFEKVEA 393          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 4.791e-65
Identity = 125/158 (79.11%), Postives = 131/158 (82.91%), Query Frame = -3
Query:   72 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVA+GLARRCIVQVSY IGVP+PLSVFVD+YGTGKIPDKEILKIVKENFDFRPG I+IN DLKRGG+GRFLKTAAYG FGRDDPDF WE+V P K EK
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGSGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 390          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK1_PETCR (S-adenosylmethionine synthetase 1 (Fragment) OS=Petroselinum crispum GN=SMS-1 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 8.173e-65
Identity = 125/158 (79.11%), Postives = 130/158 (82.28%), Query Frame = -3
Query:   72 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVASGLARRCIVQVSY IGVP+PLSVFVD+YGTGKIPD+EILKIVKE FDFRPG ISIN DLKRGGNGRFLKTAAYG FGR+DPDF WE+V P K EK
Sbjct:   76 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWEK 233          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK4_VITVI (S-adenosylmethionine synthetase 4 OS=Vitis vinifera GN=METK4 PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.067e-64
Identity = 125/158 (79.11%), Postives = 130/158 (82.28%), Query Frame = -3
Query:   72 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVASGLARRCIVQVSY IGVP+PLSVFVD+Y TGKIPDKEILKIVKE+FDFRPG I+IN DLKRGGNGRFLKTAAYG FGRDDPDF WE+V P K EK
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYATGKIPDKEILKIVKESFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKAEK 390          
BLAST of CB290861 vs. ExPASy Swiss-Prot
Match: METK1_SOLLC (S-adenosylmethionine synthetase 1 OS=Solanum lycopersicum GN=SAM1 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.067e-64
Identity = 125/158 (79.11%), Postives = 130/158 (82.28%), Query Frame = -3
Query:   72 NPSARFVIGAPPGDAGLTARKIIIDTYXXXXXXXXXXXXGKDPPKVDRSGASIVRQAVKSIVASGLARRCIVQVSYVIGVPDPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGTISINFDLKRGGNGRFLKTAAYGPFGRDDPDFPWEIVNPPK*EK 545
            NPS RFVIG P GDAGLT RKIIIDTY            GKDP KVDRSGA IVRQA KSIVASGLARRCIVQVSY IGVP+PLSVFVD+YGTGKIPD+EILKIVKENFDFRPG +SIN DLKRGGN RFLKTAAYG FGRDDPDF WE+V P K EK
Sbjct:  233 NPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMMSINLDLKRGGNRRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 390          
The following BLAST results are available for this feature:
BLAST of CB290861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK5_VITVI5.660e-6680.38S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK1_SOLTU5.660e-6680.38S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK2_VITVI9.654e-6678.88S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK2_ELAUM9.654e-6681.01S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK_LITCN1.261e-6578.26S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK2_CATRO4.791e-6578.26S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK1_CATRO4.791e-6579.11S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK1_PETCR8.173e-6579.11S-adenosylmethionine synthetase 1 (Fragment) OS=Pe... [more]
METK4_VITVI1.067e-6479.11S-adenosylmethionine synthetase 4 OS=Vitis vinifer... [more]
METK1_SOLLC1.067e-6479.11S-adenosylmethionine synthetase 1 OS=Solanum lycop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02aa07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02aa07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290861 ID=CB290861; Name=CB290861; organism=Citrus sinensis; type=EST; length=553bp
AAAAAAAATTCCACCTATATAAAAACCCATGAAAGGGCCCCAGCTCCTCC
TTGATTAATTTAAGCTGGAAATTTCTCCTACTTGGGGGGGTTAACAATCT
CCCAAGGGAAATCCGGATCATCTCTGCCAAAGGGGCCATAAGCGGCAGTC
TTCAAGAACCTGCCGTTGCCACCCCTCTTGAGATCAAAATTAATAGAAAT
CGTCCCAGGCCTAAAATCAAAATTCTCCTTCACAATCTTCAAAATTTCCT
TGTCAGGGATCTTCCCAGTCCCATAACTATCAACAAAAACTGACAAAGGG
TCGGGCACACCAATAACGTAAGAAACCTGAACAATGCATCTCCTGGCAAG
CCCACTTGCCACAATACTCTTAACAGCTTGCCTTACAATGGAAGCACCGC
TTCTATCAACCTTGGGAGGATCTTTCCCTGAGAAAGCCCCACCGCCGGGG
GCCCCCCAGCCACCATAAGTATCAATAATAATCTTCCGGGCAGTGAGCCC
AGCATCACCGGGAGGGGCACCAATAACAAAACGGGCAGATGGGTTAAAAA
GGA
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