CB290901

Overview
NameCB290901
Unique NameCB290901
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13771 contig Csv1_Contig13771:929..1762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290901 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 417.927 bits (1073), Expect = 3.432e-116
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = -3
Query:  232 YELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 834
            YELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Sbjct:  294 YELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of CB290901 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 4.091e-85
Identity = 149/202 (73.76%), Postives = 173/202 (85.64%), Query Frame = -3
Query:  232 YELVKTRTASYNSY-GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 834
            Y+LVK RT S   Y GSHVMQYGD+GLSK+ LF YLGT+PAN+N TFVDENSL  +SKAVNQRDADL+HFWDK+RKAPEG+P+K EA+KQ  E MSHRMH+D S++L+GKLLFGIEK PE+LN VRPAG  LVDDW CLK++VRTFE+HCG+LSQYGMKHMRS AN+CN GI KE+M EASAQAC  IP+ PWSSL +GFSA
Sbjct:  283 YKLVKERTISGGLYYGSHVMQYGDVGLSKDILFHYLGTDPANENLTFVDENSLWSSSKAVNQRDADLVHFWDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of CB290901 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 313.153 bits (801), Expect = 1.190e-84
Identity = 143/202 (70.79%), Postives = 171/202 (84.65%), Query Frame = -3
Query:  232 YELVKTRTASYN-SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 834
            YELVK RTA    SYGSHVMQYGD+G+SK+NL  Y+GTNPANDN+TF D NSL+P S+  NQRDADL+HFW+KYRKAPEG+ RK EAQKQ  EAMSHR+H+D+S+ L+GK+LFGI +GPE+LN VR AGQPLVDDW CLK+ VR FE HCG+LSQYG+KHMRS ANICN GI  E+M EA++QAC  +P+GPWSSL++GFSA
Sbjct:  293 YELVKRRTAPVGYSYGSHVMQYGDVGISKDNLDLYMGTNPANDNFTFADANSLKPPSRVTNQRDADLVHFWEKYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of CB290901 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 9.432e-82
Identity = 146/205 (71.22%), Postives = 171/205 (83.41%), Query Frame = -3
Query:  232 YELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENS----LRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 834
            Y+LVK RT S   YGSHVM+YGDIGLSKN+L+ YLGTNPANDN +FVDE      LR  S AVNQRDADL+HFW+K+RKAPEG+ +K EA+KQ  EAMSHR H+D+S+KLIG+LLFGIEKG E+L+ VRPAG PLVD+W CLK++V+TFE+HCG+LSQYGMKHMRS ANICN GI  E MAEASAQAC +IP+ PWSSL  GFSA
Sbjct:  290 YKLVKNRTIS-EPYGSHVMEYGDIGLSKNDLYQYLGTNPANDNNSFVDETENSLKLRTPSAAVNQRDADLIHFWEKFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of CB290901 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 295.819 bits (756), Expect = 1.967e-79
Identity = 141/202 (69.80%), Postives = 168/202 (83.17%), Query Frame = -3
Query:  232 YELVKTRTA-SYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 834
            YELVK RTA S  SYGSHVM++GDIGLSK  L  ++GTNPA++N+TFV+ENS+RP S+  NQRDADL+HFW KY+KAPEG+ RK EAQKQ  EAMSHR+HVD+SI LIG LLFG+E G  +LN VRP+G+PLVDDW CLKSLVR FE HCG+LSQYG+KHMRS+AN+CN GI   +M EA+ QAC  IP+ PWSSLD+GFSA
Sbjct:  278 YELVKKRTAGSGKSYGSHVMEFGDIGLSKEKLVLFMGTNPADENFTFVNENSIRPPSRVTNQRDADLVHFWHKYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of CB290901 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.243e-49
Identity = 96/203 (47.29%), Postives = 133/203 (65.52%), Query Frame = -3
Query:  232 YELVKTRTASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 834
            Y  VK RT++YN+Y  GSHVMQYG+  +  + L+ + G +PA+ N+   +   L    + VNQRDA+L   W  Y+++  G+ +K E  +Q  +A+ HR H+D S++LIG LLFG +K   IL +VR  G PLVDDWGCLKS+VR FE+ CG+L+QYGMKHMR+ ANICN G+    M EA   AC    +G W   ++G+SA
Sbjct:  296 YSSVKARTSNYNTYAAGSHVMQYGNQSIKADKLYLFQGFDPASVNFP-PNNAHLNAPMEVVNQRDAELHFMWQLYKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of CB290901 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.059e-49
Identity = 94/203 (46.31%), Postives = 130/203 (64.04%), Query Frame = -3
Query:  232 YELVKTRTASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 834
            Y+ VK RT+++N+Y  GSHVMQYGD  ++   L+ Y G +PA  N+       L    + VNQRDA+L   W  Y+++   +  K +  KQ  E + HR H+D S++LIG LL+G  KG  +L +VR  G  LVDDW CLKS+VR FE+HCG L+QYGMKHMR+ ANICN+G+ +  M EA   ACE   +G +   ++G+SA
Sbjct:  294 YKSVKQRTSNFNNYAMGSHVMQYGDTNITAEKLYLYQGFDPATVNFP-PQNGRLETKMEVVNQRDAELFLLWQMYQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of CB290901 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.776e-47
Identity = 92/203 (45.32%), Postives = 130/203 (64.04%), Query Frame = -3
Query:  232 YELVKTRTASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 834
            Y+ VK RT+++ +Y  GSHVMQYGD  ++   L+ Y G +PA  N+       L+   + VNQRDA+LL  W  Y+++     +K +  KQ  E + HR H+D S++LIG LL+G EK   +L +VR  G PLVDDW CLKS+VR +E+HCG+L+QYGMKHMR+ ANICN+G+ +  M +A   AC    +G     + G+SA
Sbjct:  292 YQSVKQRTSNFEAYAMGSHVMQYGDANMTAEKLYLYHGFDPATVNFP-PHNGRLKSKMEVVNQRDAELLFMWQVYQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of CB290901 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.287e-46
Identity = 93/203 (45.81%), Postives = 129/203 (63.55%), Query Frame = -3
Query:  232 YELVKTRTASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 834
            Y+ V+ RT++ NSY  GSHVMQYGD  ++   L+ Y G +PA  N+   + N L    + VNQRDA+LL  W  Y+++     +K    +Q  E + HR H+D S++LIG LL+G  K   +L++VR  G PLVDDW CLKS+VR FE+HCG+L+QYGMKHMR+  N+CN+G+ K  M EA   AC    +G     + G+SA
Sbjct:  274 YQSVRKRTSNSNSYRFGSHVMQYGDTNITAEKLYLYHGFDPATVNFPPHNGN-LEAKMEVVNQRDAELLFMWQMYQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
BLAST of CB290901 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 184.882 bits (468), Expect = 4.889e-46
Identity = 92/186 (49.46%), Postives = 121/186 (65.05%), Query Frame = -3
Query:  283 YELVKTRTASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVDENSLRPASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 834
            Y  VK RT++YN+Y  GSHVM+YG+  +    L+ Y G +PA  N   ++E  ++     VNQRDADLL  W  YR + +G+ +K +  K+  E   HR H+D S++LI  +LFG      +LN VR  G PLVDDW CLKS+VR FE HCG+L+QYGMKHMR+ AN+CN G+ KE M EAS  AC
Sbjct:  285 YHTVKMRTSNYNTYSGGSHVMEYGNNSIKSEKLYLYQGFDPATVNLP-LNELPVKSKIGVVNQRDADLLFLWHMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPTMN--VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
The following BLAST results are available for this feature:
BLAST of CB290901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI3.432e-116100.00Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU4.091e-8573.76Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEG_ARATH1.190e-8470.79Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA9.432e-8271.22Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEA_ARATH1.967e-7969.80Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO1.243e-4947.29Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN8.059e-4946.31Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU5.776e-4745.32Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
LEGU_CANEN1.287e-4645.81Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPEB_ARATH4.889e-4649.46Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_02ac07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ac07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290901 ID=CB290901; Name=CB290901; organism=Citrus sinensis; type=EST; length=836bp
ACATCACGCCCTATATACTATCAAATTACAACTGGCGGTCTGGCAGGGAA
AACCTTTTAAATATAATAATTACAAGGAAGCAATCACCAGCCAAATGAAA
ATAGACATTGCCATAAATGGAAGCAATCATCAGCCAAATGAAAATAGATA
TTGCCATATTGGCGACTATAATGAAAACTAACATATTTCAAGAACTGGCT
TATGATATTCGCACAGTTCTCGGCTTCTTTATGCACTGAATCCTTTGTCG
AGAGAACTCCAAGGACCAGAAGGAATATTTTCACAGGCTTGTGCTGATGC
TTCCGCCATCTTCTCTTTCCCAATTCCTGTATTACAGATGTTTGCAAGAG
AACGCATGTGCTTCATTCCATATTGCGATAGAGCTCCACAGTGCGACTCA
AAAGTCCTCACCAGTGATTTGAGGCAGCCCCAGTCATCAACAAGAGGCTG
ACCAGCAGGTCGAACAGTGTTCAAGATCTCTGGACCTTTCTCAATTCCAA
ATAAGAGCTTTCCAATAAGTTTGATGCTGTGGTCTACATGCATTCTATGA
GACATTGCTTCAAAAAACTGCTTCTGAGCTTCAGCCTTCCTAGGAGTGCC
CTCAGGTGCCTTGCGGTACTTGTCCCAGAAATGCAAGAGATCGGCATCTC
GCTGGTTAACAGCTTTAGATGCTGGCCTTAAGGAGTTCTCATCCACAAAA
GTGTAGTTATCATTTGCAGGATTTGTACCCAAGTACGTGAAGAGATTGTT
CTTGCTAAGACCGATATCACCATATTGCATGACATGAGAGCCATACGAAT
TGTAACTAGCAGTCCTTGTTTTAACCAGTTCATACT
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