CB290934

Overview
NameCB290934
Unique NameCB290934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13203 contig Csv1_Contig13203:59..909. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290934 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 3.096e-80
Identity = 132/223 (59.19%), Postives = 179/223 (80.27%), Query Frame = -2
Query:  182 ETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYVHAPTAVPTLHPELGTQLILRKL 850
            E++ +EI++ GN K+ G S+NDVIEECKLFYFAGQETT VLL WT +LLSKH +WQERAR+EVLQ FG NKP+++ LNHLK V MILYEVLRLYPPV  L++ V K+TKLG+ T+PAG Q+ LP +++H++  +WG+DA+EF P RF +G++ A KN V+Y PF+ GPR+C+GQNFAL++AK+   MILQ + F+++PSYVHAP  + T+ P+ G+ +I +KL
Sbjct:  300 ESNIQEIQKQGNKKDGGMSINDVIEECKLFYFAGQETTGVLLTWTTILLSKHPEWQERAREEVLQAFGKNKPEFERLNHLKYVSMILYEVLRLYPPVIDLTKIVHKDTKLGSYTIPAGTQVMLPTVMLHREKSIWGEDAMEFNPMRFVDGVANATKNNVTYLPFSWGPRVCLGQNFALLQAKLGLAMILQRFKFDVAPSYVHAPFTILTVQPQFGSHVIYKKL 522          
BLAST of CB290934 vs. ExPASy Swiss-Prot
Match: C13A2_CAEEL (Putative cytochrome P450 CYP13A2 OS=Caenorhabditis elegans GN=cyp-13A2 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.458e-29
Identity = 64/178 (35.96%), Postives = 111/178 (62.36%), Query Frame = -2
Query:  266 SMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 796
            S ++V+ +C LF   G +TT++ L++   LL+ +   QE+  +E+ + FG ++ +++ L  LK +  ++ E LRLYP  ++  SR  +K T +  + + AGV + +    +H DPELWG+D  EFKPER++    +  +++ +Y PF LGPR C+G   A++E K+  T +L+NY+FE
Sbjct:  309 SADEVVGQCFLFLIGGFDTTALSLSYVTYLLAVNPKIQEKVIEEIAREFGTSEVEFEKLGRLKYMDCVIKEALRLYPLASISNSRKCMKTTTVNGVKIEAGVYVQMDTWSLHYDPELWGEDVKEFKPERWS--TDEPLEHKGAYLPFGLGPRQCIGMRLAIMEQKILLTHLLKNYTFE 484          
BLAST of CB290934 vs. ExPASy Swiss-Prot
Match: C13A7_CAEEL (Putative cytochrome P450 CYP13A7 OS=Caenorhabditis elegans GN=cyp-13A7 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.904e-29
Identity = 71/202 (35.15%), Postives = 122/202 (60.40%), Query Frame = -2
Query:  248 ETSFREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFELSPSYV 850
            E  F + E    +K++ F  +++I +  +F  AG +TT++ L+++  LL+ H + Q++ ++EV +   + +  +D L+ LK ++ ++ E LRLYP  +++ +R  LK T +  + + AG  I +    +H DP++WGDD  EFKPER+  G  +    +  Y PF +GPRIC+G   A++E KM  T IL+NY+FE +P  V
Sbjct:  296 EQDFAKSEVLKVDKHLTF--DEIIGQLFVFLLAGYDTTALSLSYSSYLLATHPEIQKKLQEEVDRECPDPEVTFDQLSKLKYLECVVKEALRLYPLASLVHNRKCLKTTNVLGMEIEAGTNINVDTWSLHHDPKVWGDDVNEFKPERWESG-DELFFAKGGYLPFGMGPRICIGMRLAMMEMKMLLTNILKNYTFETTPETV 494          
BLAST of CB290934 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.248e-29
Identity = 68/192 (35.42%), Postives = 112/192 (58.33%), Query Frame = -2
Query:  266 REIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 838
            +E++ H +  N      +++ +  +F FAG ETTS  L+     L+ H D Q++ ++E+   F N  P  YD L  ++ + M++ E LRLYP    L RA  K+ ++  + +P G  + +P+ ++H+DP+LW  +  EF+PERF++   K   N  +Y PF  GPR C+G  FAL+  K+A   +LQN+SF+
Sbjct:  282 KEMDPHKSLSN-----EELVAQGIIFIFAGYETTSSALSLLAYELATHPDVQQKLQEEIEATFPNKAPPTYDALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLW-PEPEEFRPERFSKK-HKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFK 466          
BLAST of CB290934 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.248e-29
Identity = 65/189 (34.39%), Postives = 115/189 (60.85%), Query Frame = -2
Query:  266 EEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 829
            +E  N+K    S  +++ +  +F FAG ETTS  L++ + +L+ H D Q++ ++E+   F N  P  YD L  ++ + M++ E LR++P    L R   K+ ++  +++P G  + +P+ ++H+DP+LW  +  EF+PERF++  +K + N   Y PF  GPR C+G  FA++  K+A   +LQN+SF+
Sbjct:  282 KETDNHK--ALSDQELMAQSVIFIFAGYETTSNTLSFLLYILATHPDVQQKLQEEIDATFPNKAPPTYDVLAQMEYLDMVVNETLRMFPIAVRLDRLCKKDVEIHGVSIPKGTAVTVPIFVLHRDPQLW-PEPEEFRPERFSKK-NKDSINPYVYLPFGTGPRNCIGMRFAIMNMKLAIVRVLQNFSFK 466          
BLAST of CB290934 vs. ExPASy Swiss-Prot
Match: C13AA_CAEEL (Putative cytochrome P450 CYP13A10 OS=Caenorhabditis elegans GN=cyp-13A10 PE=2 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 1.234e-28
Identity = 68/194 (35.05%), Postives = 110/194 (56.70%), Query Frame = -2
Query:  263 FREIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFEL 841
            F +   +GN +    +  +++ +C +F  AG +TT++ L++T  LL+ H + Q++ ++E+ +        +D L+ LK +  I+ E LRLYP  TM  SR  ++ TKLGN+ +  G  + +    +H D ++WGDDA EFKPER+ +        +  Y  F LGPR CVG   A +E KM    IL+ Y+FE+
Sbjct:  300 FSKTSSYGNRQ---LTTQEIVGQCLVFLIAGFDTTALSLSYTTFLLATHPEVQKKLQEEIERECIEPSISFDHLSKLKYMDCIIKETLRLYPLGTMANSRRCMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPERWLDPNCDQVFQKGGYISFGLGPRQCVGMRLAYMEEKMLLAHILRKYTFEV 490          
BLAST of CB290934 vs. ExPASy Swiss-Prot
Match: CP3AC_CANFA (Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A12 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.106e-28
Identity = 64/175 (36.57%), Postives = 103/175 (58.86%), Query Frame = -2
Query:  266 DVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNK-PDYDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 787
            +++ +  +F FAG ETTS  L++ M  L+ H D Q++ ++E+   F N   P YD L  ++ + M+L E LRLYP    L R   K+ ++  + +P G  + +P   +H+D  LW  +  EF+PERF+   +K + N  +Y PF  GPR C+G  FA++  K+A   +LQN+SF+
Sbjct:  294 ELVAQSIIFIFAGYETTSTSLSFLMYELATHPDVQQKLQEEIDATFPNKALPTYDALVQMEYLDMVLNETLRLYPIAGRLERVCKKDVEISGVFIPKGTVVMVPTFTLHRDQSLW-PEPEEFRPERFSRK-NKDSINPYTYLPFGTGPRNCIGMRFAIMNMKLALVRVLQNFSFK 466          
BLAST of CB290934 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.691e-28
Identity = 68/194 (35.05%), Postives = 110/194 (56.70%), Query Frame = -2
Query:  266 IEEHGNNKNV----GFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 832
            +  H N+K+       S  ++  +  +F FAG ETTS  L++T+  L+ H D Q++ + E+ +   N  P  YD +  ++ + M+L E LRLYP    L R   K+ +L  + +P G  + +P   +H DP+ W +   EF+PERF++  +K + +   Y PF  GPR C+G  FAL+  K+A T I+QN+SF+
Sbjct:  276 MNSHNNSKDKVSHKALSDMEITAQSIIFIFAGYETTSSTLSFTLHSLATHPDIQKKLQDEIDEALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIANRLERVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWSEPE-EFQPERFSKE-NKGSIDPYVYLPFGNGPRNCLGMRFALMNMKLALTKIMQNFSFQ 467          
BLAST of CB290934 vs. ExPASy Swiss-Prot
Match: C13A1_CAEEL (Putative cytochrome P450 CYP13A1 OS=Caenorhabditis elegans GN=cyp-13A1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.691e-28
Identity = 64/182 (35.16%), Postives = 103/182 (56.59%), Query Frame = -2
Query:  266 NVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPDYDGLNHLKIVQMILYEVLRLYPPVTML-SRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 808
            N   +  +++ +C +F  AG +TT++ L++   LL+ H + Q++ ++EV +   N +   D L+ LK ++ +  E LRLYP      SR  ++ TKLGN+ +  G  I +    +H DP +WGDDA +FKPER+    S     +  Y PF LGPR C+G   A +E K+    IL+ ++FE
Sbjct:  308 NRQLTTEEIVGQCTVFLIAGFDTTALSLSYATYLLATHPEIQKKLQEEVNRECPNPEVTIDQLSKLKYMECVFKEALRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFE 489          
BLAST of CB290934 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.001e-28
Identity = 64/192 (33.33%), Postives = 112/192 (58.33%), Query Frame = -2
Query:  266 REIEEHGNNKNVGFSMNDVIEECKLFYFAGQETTSVLLNWTMVLLSKHQDWQERARQEVLQVFGNNKPD-YDGLNHLKIVQMILYEVLRLYPPVTMLSRAVLKETKLGNLTLPAGVQIGLPMILVHQDPELWGDDAVEFKPERFAEGISKAAKNQVSYFPFALGPRICVGQNFALVEAKMATTMILQNYSFE 838
            +EI+ H    ++     +++ +  +F F G ETTS  L++ +  L+ H   Q++ ++E+   F N  P  YD L  ++ + M++ E LR++P    L R   K+ ++  +T+P G  + +P+ ++H +PELW  +  EF+PERF++  +K + N   Y PF  GPR C+G  FA++  K+A   ILQN+SF+
Sbjct:  282 KEIDNHKALSDI-----ELVAQSTIFIFGGYETTSSTLSFIIYELTTHPHVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAGRLERVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELW-PEPEEFRPERFSKN-NKDSINPYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSFK 466          
The following BLAST results are available for this feature:
BLAST of CB290934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 496
Match NameE-valueIdentityDescription
C72A1_CATRO3.096e-8059.19Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
C13A2_CAEEL1.458e-2935.96Putative cytochrome P450 CYP13A2 OS=Caenorhabditis... [more]
C13A7_CAEEL1.904e-2935.15Putative cytochrome P450 CYP13A7 OS=Caenorhabditis... [more]
CP3AT_PIG3.248e-2935.42Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
CP3AO_SHEEP3.248e-2934.39Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
C13AA_CAEEL1.234e-2835.05Putative cytochrome P450 CYP13A10 OS=Caenorhabditi... [more]
CP3AC_CANFA2.106e-2836.57Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A1... [more]
CP3AB_MOUSE4.691e-2835.05Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE... [more]
C13A1_CAEEL4.691e-2835.16Putative cytochrome P450 CYP13A1 OS=Caenorhabditis... [more]
CP3AS_BOVIN8.001e-2833.33Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02ae02_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ae02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290934 ID=CB290934; Name=CB290934; organism=Citrus sinensis; type=EST; length=851bp
TTTATTTTTTTTTTAGCACCAAATATTGTACAATATTATTATACTACAGT
ACTAATGCAATACAGTATAATACAATACAATGTGCCAAACGCACCCTAAA
TACATTAAACTTCATTATAAAAAAGTCTACATTGGCATCATGCTCATCTT
ATAGTTGCCGGTATTAATTATTTTTGCACCATAGTTTCCGTAGAATCAAT
TGGGTACCCAGTTCCGGATGAAGGGTTGGAACCGCCGTTGGAGCATGGAC
ATAGGATGGAGACAACTCGAATGAGTAGTTTTGAAGAATCATTGTCGTGG
CCATTTTTGCTTCTACTAAAGCAAAATTTTGTCCAACACATATCCTAGGA
CCCAATGCGAATGGGAAATATGAAACTTGATTTTTCGCCGCCTTTGAAAT
TCCTTCCGCAAACCTTTCCGGCTTAAACTCAACTGCATCGTCACCCCAAA
GTTCAGGATCCTGGTGAACTAGGATCATTGGCAAGCCAATTTGAACCCCA
GCGGGTAATGTCAAGTTTCCGAGTTTCGTTTCCTTAAGAACAGCTCGACT
AAGCATAGTTACGGGCGGATAAAGCCTGAGTACCTCATAAAGTATCATCT
GGACAATTTTGAGGTGATTCAATCCATCATAGTCGGGCTTATTATTGCCA
AACACTTGCAAAACCTCTTGCCTTGCACGTTCTTGCCAATCTTGATGCTT
GCTCAATAAGACCATCGTCCAATTAAGCAAAACAGAGGTAGTCTCTTGGC
CGGCAAAGTAAAATAGCTTACACTCTTCGATCACATCGTTCATGCTGAAC
CCAACATTTTTGTTATTTCCATGTTCTTCAATCTCTCTAAAACTGGTTTC
C
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