CB290938
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290938 vs. ExPASy Swiss-Prot
Match: BMS1_HUMAN (Ribosome biogenesis protein BMS1 homolog OS=Homo sapiens GN=BMS1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 4.306e-36 Identity = 45/65 (69.23%), Postives = 54/65 (83.08%), Query Frame = -2 Query: 420 RLKQHRWWHKKVLKSRDPIFVSIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHSLAMFWGPLAP 614 RLK+HRW+ KK+LKSRDPI S+GWRR QT+P+Y IED NGR R+LKYTP+HMH A FWGP+ P Sbjct: 925 RLKKHRWY-KKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFWGPITP 988 HSP 2 Score: 66.2402 bits (160), Expect = 4.306e-36 Identity = 30/66 (45.45%), Postives = 47/66 (71.21%), Query Frame = -1 Query: 607 QMNIAELNDLDEVTRI--EGFQTGTYLGMEIHDVPFEMVEYFDPCHPVLVGGIGLGKQNVGYMQVK 798 Q+N AE D D+ R+ EGF+ G Y+ +EI +VP E V+ FDP +P+++GG+G + NVGY+Q++ Sbjct: 860 QLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQNFDPHYPIILGGLGNSEGNVGYVQMR 925
BLAST of CB290938 vs. ExPASy Swiss-Prot
Match: BMS1_SCHPO (Ribosome biogenesis protein BMS1 homolog OS=Schizosaccharomyces pombe GN=SPBC31E1.06 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 3.437e-32 Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = -2 Query: 345 RLKQHRWWHKKVLKSRDPIFVSIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHSLAMFWGPLAPPQMRSCCPKFIQQSD*A*FSSNGAF 614 R+K+HRW HKK+LK+ DP+ S+GWRR Q++PVY+I D R+RMLKYTPEHMH F+GP P C + + S F+ G+F Sbjct: 765 RIKRHRW-HKKILKTNDPLIFSMGWRRFQSIPVYSISDSRTRNRMLKYTPEHMHCFGTFYGPFVAPNSGFCAVQSVANS----FAKAGSF 849 HSP 2 Score: 61.2326 bits (147), Expect = 3.437e-32 Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = -1 Query: 607 LDWLT--RLNFAKQM--NIAELNDLDEVTR--IEGFQTGTYLGMEIHDVPFEMVEYFDPCHPVLVGGIGLGKQNVGYMQVK 831 +DW T + A+Q+ N D+D +R IEG++ GTY+ + I+DVPFE VE+FD +PV+VGG+ +Q G +QV+ Sbjct: 685 VDWYTEEKEKIARQLVINREAFEDMDPESRAEIEGYRAGTYVRIVINDVPFEFVEHFDSRYPVVVGGLLPNEQRYGLVQVR 765
BLAST of CB290938 vs. ExPASy Swiss-Prot
Match: YO021_HUMAN (Putative BMS1-like protein ENSP00000383088 OS=Homo sapiens PE=5 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.415e-27 Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = -2 Query: 435 RLKQHRWWHKKVLKSRDPIFVSIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHSLAMFW 614 RLK+HRW+ KK+LKSRDPI S+GWRR QT+P+Y IED NGR R+LKYTP+HMH A FW Sbjct: 42 RLKKHRWY-KKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFW 100 HSP 2 Score: 46.2098 bits (108), Expect = 1.415e-27 Identity = 18/41 (43.90%), Postives = 31/41 (75.61%), Query Frame = -1 Query: 607 YLGMEIHDVPFEMVEYFDPCHPVLVGGIGLGKQNVGYMQVK 729 Y+ +EI +VP E V+ DP +P+++GG+G + NVGY+Q++ Sbjct: 2 YVRVEIENVPCEFVQNIDPHYPIILGGLGNSEGNVGYVQMR 42
BLAST of CB290938 vs. ExPASy Swiss-Prot
Match: YO022_HUMAN (Putative BMS1-like protein ENSP00000383048 OS=Homo sapiens PE=5 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.980e-26 Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = -2 Query: 435 LKQHRWWHKKVLKSRDPIFVSIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHSLAMFW 611 LK+HRW+ KK+LKSRDPI S+GWRR QT+P+Y IED NGR R+LKYTP+HMH A FW Sbjct: 43 LKKHRWY-KKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAAFW 100 HSP 2 Score: 44.2838 bits (103), Expect = 1.980e-26 Identity = 17/40 (42.50%), Postives = 30/40 (75.00%), Query Frame = -1 Query: 610 YLGMEIHDVPFEMVEYFDPCHPVLVGGIGLGKQNVGYMQV 729 Y+ +EI +VP E V+ DP +P+++GG+G + NVGY+++ Sbjct: 2 YVRVEIENVPCEFVQNIDPHYPIILGGLGNSEGNVGYVEM 41
BLAST of CB290938 vs. ExPASy Swiss-Prot
Match: YI027_HUMAN (Putative BMS1-like protein ENSP00000382360 OS=Homo sapiens PE=5 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.255e-25 Identity = 39/60 (65.00%), Postives = 49/60 (81.67%), Query Frame = -2 Query: 435 RLKQHRWWHKKVLKSRDPIFVSIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHSLAMFW 614 RLK+HRW+ KK+LKS+DPI S+GWRR QT+ +Y IED NGR R+LKYTP+H+H A FW Sbjct: 42 RLKKHRWY-KKILKSQDPIIFSVGWRRFQTILLYYIEDHNGRQRLLKYTPQHIHCGAAFW 100 HSP 2 Score: 46.595 bits (109), Expect = 1.255e-25 Identity = 18/41 (43.90%), Postives = 32/41 (78.05%), Query Frame = -1 Query: 607 YLGMEIHDVPFEMVEYFDPCHPVLVGGIGLGKQNVGYMQVK 729 Y+ +EI +VP E V+ FDP +P+++GG+G + NVG++Q++ Sbjct: 2 YVRVEIENVPCEFVQNFDPHYPIILGGLGNSEGNVGHVQMR 42
BLAST of CB290938 vs. ExPASy Swiss-Prot
Match: BMS1_YEAST (Ribosome biogenesis protein BMS1 OS=Saccharomyces cerevisiae GN=BMS1 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 4.349e-25 Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = -2 Query: 375 RLKQHRWWHKKVLKSRDPIFVSIGWRRIQTVPVYAIEDRNGRHRMLKYTPEHMHSLAMFWGPLAPPQMRSCCPKFIQQSD 614 RL++HRW HKK+LK+ DP+ +S+GWRR QT+P+Y D R RMLKYTPEH + A F+GPL P C + + SD Sbjct: 828 RLRRHRW-HKKILKTNDPLVLSLGWRRFQTLPIYTTTDSRTRTRMLKYTPEHTYCNAAFYGPLCSPNTPFCGVQIVANSD 906 HSP 2 Score: 42.3578 bits (98), Expect = 4.349e-25 Identity = 22/64 (34.38%), Postives = 38/64 (59.38%), Query Frame = -1 Query: 646 LTRLNFAKQMNIAELNDLDEVT-----RIEGFQTGTYLGMEIHDVPFEMVEYFDPCHPVLVGGI 822 L + +KQ+ I + + E+T RIEGF+ G+Y+ + VP E V+ F+P P+++GG+ Sbjct: 753 LQKAKISKQLEINNI-EYQEMTPEQRQRIEGFKAGSYVRIVFEKVPMEFVKNFNPKFPIVMGGL 815 The following BLAST results are available for this feature:
BLAST of CB290938 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290938 ID=CB290938; Name=CB290938; organism=Citrus sinensis; type=EST; length=918bpback to top |