CB290974

Overview
NameCB290974
Unique NameCB290974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CB290974_ssr265 microsatellite CB290974_ssr265:265..282. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1142..1874. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.336e-75
Identity = 132/147 (89.80%), Postives = 139/147 (94.56%), Query Frame = -3 
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV   HLGKLG KLT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  339 MKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.336e-75
Identity = 132/147 (89.80%), Postives = 139/147 (94.56%), Query Frame = -3 
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV   HLGKLG KLT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  339 MKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.336e-75
Identity = 132/147 (89.80%), Postives = 138/147 (93.88%), Query Frame = -3 
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW E+ TGKYEKKVYVLPKHLDEKV   HLGKLG KLT+LTK+QADYISV  +GPYKP HYRY
Sbjct:  339 MKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERKTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTKDQADYISVPIEGPYKPAHYRY 485
[Close]
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH2_ARATH (Adenosylhomocysteinase 2 OS=Arabidopsis thaliana GN=SAHH2 PE=1 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 3.984e-75
Identity = 129/147 (87.76%), Postives = 140/147 (95.24%), Query Frame = -3 
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV   HLGKLG +LT+LTK+Q+DY+S+  +GPYKP+HYRY
Sbjct:  339 MKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSIPVEGPYKPVHYRY 485
[Close]
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_PETCR (Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2)

HSP 1 Score: 277.33 bits (708), Expect = 5.753e-74
Identity = 129/147 (87.76%), Postives = 137/147 (93.20%), Query Frame = -3 
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+T  GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV   HLGKLG KLT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  339 MKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGRGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.514e-74
Identity = 129/147 (87.76%), Postives = 138/147 (93.88%), Query Frame = -3 
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MKNNAIVCNIGHFDNEID+LGLET+PGVKRITIKPQTDRWVFPETN+GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV   HL KLG KLT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  339 MKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPYKPFHYRY 485
[Close]
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.813e-74
Identity = 129/147 (87.76%), Postives = 138/147 (93.88%), Query Frame = -3 
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MKNNAIVCNIGHFDNEID+ GLETYPGVKRITIKPQTDRWVFPET SGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ+ELWKEK++GKYEKKVYVLPKHLDEKV   HLG+LG KLT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  339 MKNNAIVCNIGHFDNEIDMHGLETYPGVKRITIKPQTDRWVFPETKSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQIELWKEKTSGKYEKKVYVLPKHLDEKVAALHLGQLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.729e-73
Identity = 126/147 (85.71%), Postives = 139/147 (94.56%), Query Frame = -3 
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFPET +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EK++GKYEKKVYVLPKHLDEKV + HLGKLG +LT+L+K+Q+DY+S+  +GPYKP HYRY
Sbjct:  339 MKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKPPHYRY 485
[Close]
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_SOLLC (Adenosylhomocysteinase OS=Solanum lycopersicum GN=SAHH PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.870e-73
Identity = 128/147 (87.07%), Postives = 136/147 (92.52%), Query Frame = -3 
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MKNNAIVCNIGHFDNEID+ GLET+PGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW E+S+GKYEKKVYVLPKHLDEKV   HLGK G KLT+LTK+QADYI V  +GPYKP HYRY
Sbjct:  339 MKNNAIVCNIGHFDNEIDMHGLETFPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERSSGKYEKKVYVLPKHLDEKVAALHLGKFGAKLTKLTKDQADYIYVPVEGPYKPAHYRY 485
[Close]
BLAST of CB290974 vs. ExPASy Swiss-Prot
Match: SAHH_MESCR (Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 3.157e-72
Identity = 127/147 (86.39%), Postives = 137/147 (93.20%), Query Frame = -3 
Query:  291 MKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVVVFHLGKLGVKLTRLTKEQADYISVSADGPYKPLHYRY 731
            MKNNAIVCNIGHFDNEID+LGLE YPGVKRITIKPQTDR+VFPETN+GIIVLAEGRLM LGCATGHPSFVMSCSFTNQVIAQLELW E+++GKYEKKVYVLPKHLDEKV   HLGKLG KLT+L+K+QADYISV  +GPYKP HYRY
Sbjct:  339 MKNNAIVCNIGHFDNEIDMLGLENYPGVKRITIKPQTDRFVFPETNTGIIVLAEGRLMKLGCATGHPSFVMSCSFTNQVIAQLELWNERASGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
The following BLAST results are available for this feature:
BLAST of CB290974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
SAHH_TOBAC2.336e-7589.80Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_NICSY2.336e-7589.80Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH_CATRO2.336e-7589.80Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH2_ARATH3.984e-7587.76Adenosylhomocysteinase 2 OS=Arabidopsis thaliana G... [more]
SAHH_PETCR5.753e-7487.76Adenosylhomocysteinase OS=Petroselinum crispum GN=... [more]
SAHH_LUPLU7.514e-7487.76Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH_MEDSA9.813e-7487.76Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]
SAHH1_ARATH3.729e-7385.71Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_SOLLC4.870e-7387.07Adenosylhomocysteinase OS=Solanum lycopersicum GN=... [more]
SAHH_MESCR3.157e-7286.39Adenosylhomocysteinase OS=Mesembryanthemum crystal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_02af12_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02af12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290974 ID=CB290974; Name=CB290974; organism=Citrus sinensis; type=EST; length=733bp
CAATAAAGTAAACGAAAGCCCTCAAAGCCAGCAAAACTTAAAACTGCATC
AAATACAACATAATCCAACCCGGCCCCATCCAAAACCTTATTCAAATCCC
AAATGGGCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTC
CCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCCTACTA
CAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCC
CTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAATACCTGTAA
TGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCAGCCTG
CTCCTTGGTGAGCCTGGTGAGCTTAACTCCAAGTTTGCCAAGGTGAAAAA
CAACAACCTTCTCATCGAGGTGCTTGGGCAAAACATACACCTTCTTCTCG
TACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTG
ATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGCACATC
CCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTC
TCGGGGAAAACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGCTTAAC
ACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAAGTGAC
CAATGTTGCAAACAATTGCATTGTTCTTCATCT
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