CB290980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB290980 vs. ExPASy Swiss-Prot
Match: ATPO_IPOBA (ATP synthase subunit O, mitochondrial OS=Ipomoea batatas PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.680e-49 Identity = 105/179 (58.66%), Postives = 131/179 (73.18%), Query Frame = 1 Query: 118 MATVSPIRS-SLSVFNKIL----KSNSQLSPLHPQLS-----KGFSTSSLQKEQKVKVPLALFGGSGNYASALYIAAVKTNALEKAESEILDLDEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTNHFLVVLADNGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLP 624 MA RS S+ K L +SN+ S L P LS + ++T+S KEQK+KVPL ++G SGNYASALY+AAVK+N LEK ESE+ DL EASKK+ T+ QF +D SVP +TRVNAI EIC QAKF D T +FL++LA+NGRL+++D I KRF ELTMAH+GEVK TVT+VIPLP Sbjct: 1 MAMTGRARSMGFSILQKALSSAQRSNAHRSILCPTLSNSELLRNYATASASKEQKIKVPLTMYGVSGNYASALYLAAVKSNTLEKVESELYDLVEASKKSPTFSQFMRDPSVPVDTRVNAIKEICAQAKFGDTTQNFLLILAENGRLKHIDRIVKRFKELTMAHRGEVKATVTTVIPLP 179
BLAST of CB290980 vs. ExPASy Swiss-Prot
Match: ATPO_ARATH (ATP synthase subunit O, mitochondrial OS=Arabidopsis thaliana GN=At5g13450 PE=1 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 6.512e-38 Identity = 86/166 (51.81%), Postives = 118/166 (71.08%), Query Frame = 1 Query: 139 RSSLSVFNKILKSNSQLS----PLHPQLSKGFSTSSLQKEQKVKVPLALFGGSGNYASALYIAAVKTNALEKAESEILDLDEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTNHFLVVLADNGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLP 624 RS +S F I ++S S L P L + ++T+S Q VKVP+AL G +GN+AS LYIAAVK N+LEK E+++ ++ EA K A + QFTKD SVP TR+ AI + C QAKF++ T +FL +LA+NG+L+NLD I K+F++LT AH+G+VKV VT+VIPLP Sbjct: 6 RSGISFFKTIAVTDSVSSVRSKSLFPAL-RTYATASAQTTANVKVPIALVGENGNFASWLYIAAVKMNSLEKIETDLSEMIEAMKTAPIFAQFTKDPSVPRGTRLAAIRDACDQAKFAEPTKNFLSLLAENGKLKNLDAIVKKFMQLTNAHRGDVKVLVTTVIPLP 170
BLAST of CB290980 vs. ExPASy Swiss-Prot
Match: ATPO_PONAB (ATP synthase subunit O, mitochondrial OS=Pongo abelii GN=ATP5O PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.006e-16 Identity = 50/135 (37.04%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 220 FSTSSLQKEQK-VKVPLALFGGSGNYASALYIAAVKTNALEKAESEILDLDEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTNHFLVVLADNGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 621 FSTS ++ K V+ P+ ++G G YA+ALY AA K N LE+ E E+L + + K+ V +V ++N+I + +FS +T + + +LA+NGRL N + F + AH+GEV TVTS PL Sbjct: 16 FSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAAPVLNPY-VKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSAHRGEVPCTVTSASPL 149
BLAST of CB290980 vs. ExPASy Swiss-Prot
Match: ATPO_HUMAN (ATP synthase subunit O, mitochondrial OS=Homo sapiens GN=ATP5O PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.561e-15 Identity = 49/135 (36.30%), Postives = 75/135 (55.56%), Query Frame = 1 Query: 220 FSTSSLQKEQK-VKVPLALFGGSGNYASALYIAAVKTNALEKAESEILDLDEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTNHFLVVLADNGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 621 FSTS ++ K V+ P+ ++G G YA+ALY AA K N LE+ E E+L + + K+ V +V ++N+I + +FS +T + + +LA+NGRL N + F + H+GEV TVTS PL Sbjct: 16 FSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASVLNPY-VKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPL 149
BLAST of CB290980 vs. ExPASy Swiss-Prot
Match: ATPO_RHIFE (ATP synthase subunit O, mitochondrial OS=Rhinolophus ferrumequinum GN=ATP5O PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.662e-15 Identity = 47/135 (34.81%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 220 FSTSSLQKEQK-VKVPLALFGGSGNYASALYIAAVKTNALEKAESEILDLDEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTNHFLVVLADNGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 621 FSTS ++ K V+ P+ ++G G YA+ALY AA K N LE+ E E+L + + K+ + +V ++N++ T+ KFS +T++ + +LA+NGRL N + F + H+GEV +VT+ PL Sbjct: 16 FSTSVVRPFTKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVAQLLKEPKMAASIMNPY-IKRSIKVKSLNDMTTKEKFSPLTSNLMNLLAENGRLNNTPGVISAFSTIMSVHRGEVPCSVTTASPL 149
BLAST of CB290980 vs. ExPASy Swiss-Prot
Match: ATPO_RAT (ATP synthase subunit O, mitochondrial OS=Rattus norvegicus GN=Atp5o PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.254e-14 Identity = 46/137 (33.58%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 214 KGFSTSSLQKEQK-VKVPLALFGGSGNYASALYIAAVKTNALEKAESEILDLDEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTNHFLVVLADNGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 621 + FSTS ++ K V+ P+ ++G G YA+ALY AA K L++ E E+L + + K + +V ++ +I T+ KFS +T + + +LA+NGRL N + F + H+GEV TVT+ PL Sbjct: 14 RSFSTSVVRPFSKLVRPPVQVYGIEGRYATALYSAASKQKRLDQVEKELLRVGQLLKDPKVSLAVLNPY-IKRSIKVKSLKDITTKEKFSPLTANLMNLLAENGRLGNTQGVISAFSTIMSVHRGEVPCTVTTAFPL 149
BLAST of CB290980 vs. ExPASy Swiss-Prot
Match: ATPO_SORAR (ATP synthase subunit O, mitochondrial OS=Sorex araneus GN=ATP5O PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.844e-14 Identity = 47/138 (34.06%), Postives = 73/138 (52.90%), Query Frame = 1 Query: 214 KGFSTSSLQKEQK-VKVPLALFGGSGNYASALYIAAVKTNALEKAESEILDLDEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTNHFLVVLADNGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLP 624 + FSTS + K V+ P+ ++G G YA+ALY AA K N L++ E E+L + + K+ V +V +I ++ + K S +T + + +LA+NGRL N I F + H+GEV TVT+ LP Sbjct: 14 RSFSTSVARPFAKLVRPPIQIYGVEGRYATALYSAASKQNKLDQVEKELLRVAQLLKEPKLAASILNP-HVKRAIKVKSIGDLTAREKLSPITTNLINLLAENGRLNNTPGIISAFSTMMSVHRGEVPCTVTTASALP 150
BLAST of CB290980 vs. ExPASy Swiss-Prot
Match: ATPO_MOUSE (ATP synthase subunit O, mitochondrial OS=Mus musculus GN=Atp5o PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.844e-14 Identity = 47/137 (34.31%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 214 KGFSTSSLQKEQK-VKVPLALFGGSGNYASALYIAAVKTNALEKAESEILDLDEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTNHFLVVLADNGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 621 + FSTS ++ K V+ P+ ++G G YA+ALY AA K L++ E E+L + + K + +V ++N+I + KFS +T + + +LA+NGRL N I F + H+GEV TVT+ PL Sbjct: 14 RSFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKEKKLDQVEKELLRVGQLLKDPKVSLAVLNPY-IKRTVKVKSLNDITKREKFSPLTANLMNLLAENGRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPL 149
BLAST of CB290980 vs. ExPASy Swiss-Prot
Match: ATPO_BOVIN (ATP synthase subunit O, mitochondrial OS=Bos taurus GN=ATP5O PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 3.844e-14 Identity = 46/135 (34.07%), Postives = 75/135 (55.56%), Query Frame = 1 Query: 220 FSTSSLQKEQK-VKVPLALFGGSGNYASALYIAAVKTNALEKAESEILDLDEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTNHFLVVLADNGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 621 FSTS ++ K V+ P+ ++G G YA+ALY AA K N LE+ E E+L + + K+ V +V +++++ + KFS +T++ + +LA+NGRL N + F + H+GEV TVT+ L Sbjct: 16 FSTSVVRPFAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQILKEPKMAASLLNPY-VKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRGEVPCTVTTASAL 149
BLAST of CB290980 vs. ExPASy Swiss-Prot
Match: ATPO_PIG (ATP synthase subunit O, mitochondrial OS=Sus scrofa GN=ATP5O PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.564e-14 Identity = 45/135 (33.33%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 220 FSTSSLQKEQK-VKVPLALFGGSGNYASALYIAAVKTNALEKAESEILDLDEASKKADTYFQFTKDLSVPAETRVNAINEICTQAKFSDVTNHFLVVLADNGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 621 FSTS ++ K V+ P+ ++G G YA+ALY AA K N LE+ E E+L + + K+ V +V +++++ + KFS +T++ + +LA+NGRL + + F + H+GEV +VT+ PL Sbjct: 16 FSTSVVRPFAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASIMNPY-VKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLSSTPGVISAFSTMMSVHRGEVPCSVTTASPL 149 The following BLAST results are available for this feature:
BLAST of CB290980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290980 ID=CB290980; Name=CB290980; organism=Citrus sinensis; type=EST; length=625bpback to top |