CB291008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL8_ARATH (Scarecrow-like protein 8 OS=Arabidopsis thaliana GN=SCL8 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 7.049e-64 Identity = 118/164 (71.95%), Postives = 136/164 (82.93%), Query Frame = -2 Query: 239 RMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 730 R+PDESV TENPRDELLRRVKGL P VVTLVEQE N+NTAPF+ RV+E+CA YGAL +S+ESTV +S R KVEEG+ RKL N+VACEG DR+ERCEVFGKWR RM MAGFEL P+S+ I ESM++R GNRV+PGF VKE+NGG+CFGWMGR L V AWR Sbjct: 480 RVPDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTNSDRAKVEEGIGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSR---GNRVHPGFTVKEDNGGVCFGWMGRALTVASAWR 640
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.748e-38 Identity = 83/164 (50.61%), Postives = 109/164 (66.46%), Query Frame = -2 Query: 239 MPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEG-LSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 727 MPDESVSTEN RD LLR VK LSP VVTLVEQE+NTNTA F R E YY A+F+SI+ T+ RDH R+ VE+ L+R + N +ACEG DRVER E+ GKWR+R MAGF P+S ++ ++++ L + + ++E +G + GWM R L AW+ Sbjct: 330 MPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLL---RNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana GN=SCL21 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.644e-38 Identity = 79/164 (48.17%), Postives = 110/164 (67.07%), Query Frame = -2 Query: 239 MPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEG-LSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 727 +PDESVS EN RD LLR VK LSP VVTLVEQE NTNT+PF+ R E +YY A+F+SI+ + R+H R+ +E+ ++R + N +ACEG +R+ER E+ GKW++R MAGFE P+S II ++R L + G+ ++E +G + GWM R L AW+ Sbjct: 253 LPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRD---YSNGYAIEERDGALYLGWMDRILVSSCAWK 413
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.297e-37 Identity = 80/163 (49.08%), Postives = 107/163 (65.64%), Query Frame = -2 Query: 242 MPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEG-LSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAW 727 +PDESVST N RD LLR VK LSP V+TLVE E+NTNTAPF R E YY A+F+SI+ T+ RD R+ +E+ L+R++ N +ACEG +R ER E FGKW+AR+ MAGF P+S ++ ++RT L S + + + E +G + GW R L V AW Sbjct: 384 IPDESVSTANHRDRLLRMVKSLSPKVLTLVEMESNTNTAPFPQRFAETLDYYTAIFESIDLTLPRDDRERINMEQHCLAREIVNLIACEGEERAERYEPFGKWKARLTMAGFRPSPLSSLVNATIRTLLQS---YSDNYKLAERDGALYLGWKSRPLVVSSAW 543
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica GN=CIGR1 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.061e-35 Identity = 75/162 (46.30%), Postives = 105/162 (64.81%), Query Frame = -2 Query: 242 PDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEG-LSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAW 724 PDESV NPRD LLR VKGLSP V TLVEQE++TNT PF+ R E YY A+F+SI++ + RD+ R+ VE+ L++ + N +ACEG+DRVER E+ GKW++R+ MAGF P+S + +R L+ + + + E++G + GW R L AW Sbjct: 412 PDESVDVNNPRDGLLRMVKGLSPKVTTLVEQESHTNTTPFLMRFGETMEYYSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRVERHELLGKWKSRLTMAGFRPYPLSSYVNSVIRKLLAC---YSDKYTLDEKDGAMLLGWRSRKLISASAW 570
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.809e-35 Identity = 79/164 (48.17%), Postives = 108/164 (65.85%), Query Frame = -2 Query: 239 MPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVE-EGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 727 MPDESV+T N RDELL VK L+P +VT+VEQ+ NTNT+PF R EA YY A+F+S++ T+ R+ R+ VE + L+R + N VACEG +R+ER E GKWRARM MAGF KPMS + +++ + + + +KEE G + F W ++L V AWR Sbjct: 432 MPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIK--QQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.979e-35 Identity = 78/164 (47.56%), Postives = 107/164 (65.24%), Query Frame = -2 Query: 239 MPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEG-LSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 727 MPDESV+ EN RD LLR VK LSP+VVTLVEQE NTNTAPF+ R E +Y A+F+SI+ + RDH R+ VE+ L+R++ N +ACEG +R ER E GKWR+R MAGF+ P+S + +++ L S + + ++E +G + GW + L AWR Sbjct: 437 MPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLES---YSEKYTLEERDGALYLGWKNQPLITSCAWR 597
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: SCL13_ARATH (Scarecrow-like protein 13 OS=Arabidopsis thaliana GN=SCL13 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.345e-22 Identity = 54/101 (53.47%), Postives = 71/101 (70.30%), Query Frame = -2 Query: 428 MPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEG-LSRKLANSVACEGRDRVERCEVFG 727 MPDESVS EN RD LL +K LSP +VTLVEQE+NTNT+PF++R E YY A+F+SI++ RD R+ E+ ++R + N +ACE +RVER EV G Sbjct: 182 MPDESVSVENHRDRLLHLIKSLSPKLVTLVEQESNTNTSPFLSRFVETLDYYTAMFESIDAARPRDDKQRISAEQHCVARDIVNMIACEESERVERHEVLG 282
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana GN=RGL2 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.756e-22 Identity = 61/151 (40.40%), Postives = 82/151 (54.30%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 ++LL VK + PS+VT+VEQE N N F+ R NEA YY +LFDS+E + RV E L R++ N VA EG DRVER E +WR RM+ AGF+ + + L S G+ V+E +G + GW R L AW+ Sbjct: 396 EKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGS-SAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWK 545
BLAST of CB291008 vs. ExPASy Swiss-Prot
Match: RGL3_ARATH (DELLA protein RGL3 OS=Arabidopsis thaliana GN=RGL3 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.536e-21 Identity = 60/153 (39.22%), Postives = 82/153 (53.59%), Query Frame = -2 Query: 239 DELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSARVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQ--IIPESMRTRLSSGNRVNPGFPVKEENGGICFGWMGRTLPVVFAWR 691 ++LL VK + P +VT+VEQE N N F+ R NEA YY +LFDS+E V+ RV E L R++ N VA EG DR+ER E +WR RM AGF+ + S+ LS G G+ V+E +G + W + L AW+ Sbjct: 367 EKLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYLGRQILNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGG---GDGYRVEENDGSLMLAWQTKPLIAASAWK 516 The following BLAST results are available for this feature:
BLAST of CB291008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291008 ID=CB291008; Name=CB291008; organism=Citrus sinensis; type=EST; length=731bpback to top |