CB291036

Overview
NameCB291036
Unique NameCB291036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig164 contig Csv1_Contig164:1..841. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 2.470e-106
Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = -2 
Query:  262 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 840
            IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+AIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN
Sbjct:  233 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 425
[Close]
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 2.470e-106
Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = -2 
Query:  262 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 840
            IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+AIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN
Sbjct:  234 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
[Close]
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1)

HSP 1 Score: 383.645 bits (984), Expect = 7.185e-106
Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = -2 
Query:  262 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 840
            IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE RTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+AIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN
Sbjct:  234 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
[Close]
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1)

HSP 1 Score: 383.645 bits (984), Expect = 7.185e-106
Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = -2 
Query:  262 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 840
            IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE RTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGM+AIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN
Sbjct:  234 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
[Close]
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2)

HSP 1 Score: 353.599 bits (906), Expect = 7.963e-97
Identity = 174/192 (90.62%), Postives = 183/192 (95.31%), Query Frame = -2 
Query:  265 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVY 840
            +GSELVQKY+GEGARMVRELFQMARSKKACI+FFDE+DAIGGARFDDGVG DNEVQRTMLEI+ QLDGFDARGNIKVLMATNRPD LDPALLRPGRLDRKVEF LPDLE RTQIFKIHTRTM+CERDIRFELLA LCPNSTGADIRSVC EAGM+AI ARRK+VTEKDFLDAVNKV+KGYQKFSATPKYM Y
Sbjct:  271 VGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAY 462
[Close]
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 4.369e-95
Identity = 167/193 (86.53%), Postives = 181/193 (93.78%), Query Frame = -2 
Query:  262 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 840
            IGSELVQKYVGEGARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRARRK  TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct:  241 IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
[Close]
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3)

HSP 1 Score: 347.436 bits (890), Expect = 5.707e-95
Identity = 167/193 (86.53%), Postives = 181/193 (93.78%), Query Frame = -2 
Query:  262 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 840
            IGSELVQKYVGEGARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRARRK  TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct:  241 IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
[Close]
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5)

HSP 1 Score: 347.436 bits (890), Expect = 5.707e-95
Identity = 167/193 (86.53%), Postives = 181/193 (93.78%), Query Frame = -2 
Query:  262 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 840
            IGSELVQKYVGEGARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRARRK  TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct:  241 IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
[Close]
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 347.436 bits (890), Expect = 5.707e-95
Identity = 167/193 (86.53%), Postives = 181/193 (93.78%), Query Frame = -2 
Query:  262 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 840
            IGSELVQKYVGEGARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRARRK  TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct:  241 IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
[Close]
BLAST of CB291036 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3)

HSP 1 Score: 347.436 bits (890), Expect = 5.707e-95
Identity = 167/193 (86.53%), Postives = 181/193 (93.78%), Query Frame = -2 
Query:  262 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 840
            IGSELVQKYVGEGARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTGA+IRSVCTEAGMFAIRARRK  TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct:  241 IGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
The following BLAST results are available for this feature:
BLAST of CB291036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 370
Match NameE-valueIdentityDescription
PRS7_PRUPE2.470e-10699.4826S protease regulatory subunit 7 OS=Prunus persic... [more]
PRS7A_ARATH2.470e-10699.4826S protease regulatory subunit 7 homolog A OS=Ara... [more]
PRS7_SPIOL7.185e-10698.9626S protease regulatory subunit 7 OS=Spinacia oler... [more]
PRS7_ORYSJ7.185e-10698.9626S protease regulatory subunit 7 OS=Oryza sativa ... [more]
PRS7B_ARATH7.963e-9790.6326S protease regulatory subunit 7 homolog B OS=Ara... [more]
PRS7_XENLA4.369e-9586.5326S protease regulatory subunit 7 OS=Xenopus laevi... [more]
PRS7_RAT5.707e-9586.5326S protease regulatory subunit 7 OS=Rattus norveg... [more]
PRS7_MOUSE5.707e-9586.5326S protease regulatory subunit 7 OS=Mus musculus ... [more]
PRS7_MACFA5.707e-9586.5326S protease regulatory subunit 7 OS=Macaca fascic... [more]
PRS7_HUMAN5.707e-9586.5326S protease regulatory subunit 7 OS=Homo sapiens ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_02ba10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ba10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291036 ID=CB291036; Name=CB291036; organism=Citrus sinensis; type=EST; length=841bp
TTTTTTTTTTTTTAGAAAGAAATATTCATAAAATAATTTAATTCCATGTT
CTAACAGAAATTGGAAAATCCACGTAATTATGAAATCATACAAAATGGTT
CTTGAGAGGGCAAATGTTACGCAAACACAGCAAGTTTAAACAACAGAGAA
TCAAATTGATGGGACAGCCTCTCAAAGGAACTTCATGATCTTGGATAACC
CTCTGAGAAGGTGGAACAATTGCGTCCAAGCATCTCTCCAGAAAGAAAAA
CATCGGAATCAATTGTAGACCATATATTTAGGCGTTGCACTGAACTTTTG
ATATCCCTTGATGACTTTGTTCACTGCATCGAGGAAGTCTTTCTCTGTCA
CTGTTTTTCTTCGTGCCCGGATGGCAAACATCCCAGCTTCTGTGCATACA
CTCCTTATATCAGCTCCGGTGGAATTGGGGCAAAGCCTAGCCAAGAGCTC
AAAGCGGATATCTCTTTCACAGTTCATTGTTCGCGTGTGGATCTTAAATA
TCTGTGTCCGGCTCTCCAAATCAGGAAGGCCAAACTCAACCTTACGATCT
AATCGTCCGGGACGCAACAGGGCCGGATCAAGTGTGTCAGGCCTGTTTGT
TGCCATTAGAACTTTGATATTTCCACGAGCATCAAACCCATCAAGCTGAT
TCACAATTTCAAGCATTGTGCGTTGAACCTCGTTGTCCCCGCCAACACCA
TCATCAAAACGTGCACCTCCTATAGCATCAACTTCATCAAAGAAGACAAT
ACAAGCCTTCTTTGAACGTGCCATCTGAAATAGTTCGCGAACCATACGAG
CTCCCTCACCAACATATTTCTGTACAAGCTCACTCCCAATC
back to top