CB291078
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB291078 vs. ExPASy Swiss-Prot
Match: ERF1Z_ARATH (Eukaryotic peptide chain release factor subunit 1-3 OS=Arabidopsis thaliana GN=ERF1-3 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.237e-40 Identity = 77/96 (80.21%), Postives = 88/96 (91.67%), Query Frame = -2 Query: 580 IVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDDSE 867 IVIKHL ++QE NQ+NF D+ T+AELEVQEK LLEWFANEY+RFGCTLEFVTNKSQEGSQFCRGFGGIGG+LRYQLDMR+FDE S DGE+Y+DS+ Sbjct: 341 IVIKHLGKDQENNQSNFHDAETNAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGLLRYQLDMRTFDELS-DGEVYEDSD 435
BLAST of CB291078 vs. ExPASy Swiss-Prot
Match: ERF1Y_ARATH (Eukaryotic peptide chain release factor subunit 1-2 OS=Arabidopsis thaliana GN=ERF1-2 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.968e-37 Identity = 72/96 (75.00%), Postives = 86/96 (89.58%), Query Frame = -2 Query: 580 IVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDDSE 867 +V+KH ++QE++ +NF DS T+AELEVQEK LLEWFANEY+RFGCTLEFVTNKSQEGSQFCRGFGGIGG+LRYQLDMR+FDE SD E+Y+DS+ Sbjct: 340 MVVKHFGKDQESDTSNFHDSETNAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDMRTFDELSDT-EVYEDSD 434
BLAST of CB291078 vs. ExPASy Swiss-Prot
Match: ERF1X_ARATH (Eukaryotic peptide chain release factor subunit 1-1 OS=Arabidopsis thaliana GN=ERF1-1 PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 2.252e-33 Identity = 69/93 (74.19%), Postives = 77/93 (82.80%), Query Frame = -2 Query: 586 VIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDD 864 VIKHLN+EQE N NF+ + + L+V+EK SLLEW ANEYRRFGC LEFVTNKSQEGSQFCRGFGGIGGILRYQLDM +FD S+DGE DD Sbjct: 343 VIKHLNKEQEANTENFKVADSDLALDVEEKLSLLEWLANEYRRFGCALEFVTNKSQEGSQFCRGFGGIGGILRYQLDMTAFD--SEDGEALDD 433
BLAST of CB291078 vs. ExPASy Swiss-Prot
Match: ERF1_POLMI (Eukaryotic peptide chain release factor subunit 1 OS=Polyandrocarpa misakiensis GN=ERF1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.706e-23 Identity = 49/92 (53.26%), Postives = 67/92 (72.83%), Query Frame = -2 Query: 586 IKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYDD 861 I L +QE ++ +F D T E+E+ E SLLEWFAN Y++FG TLE VT++SQEGSQF +GFGGIGG+LRY++D + + DD ++YDD Sbjct: 343 ILFLKPDQEKDKTHFTDKDTGVEMEMVESCSLLEWFANNYKKFGSTLEIVTDRSQEGSQFVKGFGGIGGMLRYRIDFQGMEFNDDDPDLYDD 434
BLAST of CB291078 vs. ExPASy Swiss-Prot
Match: ERF1_DICDI (Eukaryotic peptide chain release factor subunit 1 OS=Dictyostelium discoideum GN=erf1 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 6.147e-23 Identity = 47/92 (51.09%), Postives = 68/92 (73.91%), Query Frame = -2 Query: 580 LNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSD-DGEIYDDSE 852 LN++Q + + F+D + + E+ E+ ++EWFAN Y+ FG +LEFVTNKSQEGSQFC+GFGG+GG+LRYQ+D ++F + D YDDS+ Sbjct: 347 LNKDQNKDASVFKDKESGLDYEIVEEMPIVEWFANNYKNFGASLEFVTNKSQEGSQFCKGFGGLGGLLRYQVDFAQLNDFDNPDENEYDDSD 438
BLAST of CB291078 vs. ExPASy Swiss-Prot
Match: ERF1_DROME (Eukaryotic peptide chain release factor subunit 1 OS=Drosophila melanogaster GN=eRF1 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 2.336e-22 Identity = 51/94 (54.26%), Postives = 66/94 (70.21%), Query Frame = -2 Query: 586 IKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRS--FDEFSDDGEIYDD 861 + HL EQE ++++F D + E+E+ E LLEW AN Y+ FG TLE +T+KSQEGSQF RGFGGIGGILRY++D +S DE +DG DD Sbjct: 344 VLHLTPEQEKDKSHFTDKESGVEMELIESQPLLEWLANNYKMFGATLEIITDKSQEGSQFVRGFGGIGGILRYKVDFQSMQLDELDNDGFDLDD 437
BLAST of CB291078 vs. ExPASy Swiss-Prot
Match: ERF1_RAT (Eukaryotic peptide chain release factor subunit 1 OS=Rattus norvegicus GN=Etf1 PE=2 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 1.159e-21 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -2 Query: 589 IKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 861 I +L EQE ++++F D T E E+ E LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D + + D E +D Sbjct: 343 ILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFD 433
BLAST of CB291078 vs. ExPASy Swiss-Prot
Match: ERF1_RABIT (Eukaryotic peptide chain release factor subunit 1 OS=Oryctolagus cuniculus GN=ETF1 PE=2 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 1.159e-21 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -2 Query: 589 IKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 861 I +L EQE ++++F D T E E+ E LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D + + D E +D Sbjct: 343 ILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFD 433
BLAST of CB291078 vs. ExPASy Swiss-Prot
Match: ERF1_PONAB (Eukaryotic peptide chain release factor subunit 1 OS=Pongo abelii GN=ETF1 PE=2 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 1.159e-21 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -2 Query: 589 IKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 861 I +L EQE ++++F D T E E+ E LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D + + D E +D Sbjct: 343 ILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFD 433
BLAST of CB291078 vs. ExPASy Swiss-Prot
Match: ERF1_MOUSE (Eukaryotic peptide chain release factor subunit 1 OS=Mus musculus GN=Etf1 PE=1 SV=4) HSP 1 Score: 103.99 bits (258), Expect = 1.159e-21 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -2 Query: 589 IKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDEFSDDGEIYD 861 I +L EQE ++++F D T E E+ E LLEWFAN Y++FG TLE VT+KSQEGSQF +GFGGIGGILRY++D + + D E +D Sbjct: 343 ILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFD 433 The following BLAST results are available for this feature:
BLAST of CB291078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291078 ID=CB291078; Name=CB291078; organism=Citrus sinensis; type=EST; length=868bpback to top |