CB291303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB291303 vs. ExPASy Swiss-Prot
Match: RL23_ARATH (60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2 SV=3) HSP 1 Score: 235.343 bits (599), Expect = 1.901e-61 Identity = 115/123 (93.50%), Postives = 118/123 (95.93%), Query Frame = -2 Query: 253 LGLPVAATVNCSDNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMASVKKGKPDLRKKVMPAVIVRQRNPWRRKDGVFMYFEDNGGVIVIPKGEMKGSAITGPIGKECDDLWPRIASAANDIV 621 LGLPVAATVNC+DNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMA+VKKGKPDLRKKV+PAVIVRQR PWRRKDGVFMYFEDN GVIV PKGEMKGSAITGPIGKEC DLWPRIASAAN IV Sbjct: 18 LGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
BLAST of CB291303 vs. ExPASy Swiss-Prot
Match: RL23_TOBAC (60S ribosomal protein L23 OS=Nicotiana tabacum GN=RPL23 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.232e-60 Identity = 113/123 (91.87%), Postives = 117/123 (95.12%), Query Frame = -2 Query: 253 LGLPVAATVNCSDNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMASVKKGKPDLRKKVMPAVIVRQRNPWRRKDGVFMYFEDNGGVIVIPKGEMKGSAITGPIGKECDDLWPRIASAANDIV 621 LGLPVAAT+NC+DNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMA+VKKGKPDLRKKVMPAV+VRQR PWRRKDGVFMYFEDN GVIV KGEMKGSAITGPIGKEC DLWPRIASAAN IV Sbjct: 18 LGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNAKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
BLAST of CB291303 vs. ExPASy Swiss-Prot
Match: RL23_TORRU (60S ribosomal protein L23 OS=Tortula ruralis GN=RPL23 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 7.736e-55 Identity = 105/123 (85.37%), Postives = 111/123 (90.24%), Query Frame = -2 Query: 253 LGLPVAATVNCSDNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMASVKKGKPDLRKKVMPAVIVRQRNPWRRKDGVFMYFEDNGGVIVIPKGEMKGSAITGPIGKECDDLWPRIASAANDIV 621 LGLPV A VNC+DNTGAKNLY+IS G++GRLNRLP+A VGDMVMA+VKKGKPDLRKKVMPAVIVRQR PWRRKDGVFMYFEDN GVIV PKGEM SAITGPIGKEC DLWPRIASAAN IV Sbjct: 18 LGLPVGAVVNCADNTGAKNLYVIS-SGVRGRLNRLPAAAVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNPSAITGPIGKECADLWPRIASAANAIV 139
BLAST of CB291303 vs. ExPASy Swiss-Prot
Match: RL23_DANRE (60S ribosomal protein L23 OS=Danio rerio GN=rpl23 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 6.130e-52 Identity = 99/122 (81.15%), Postives = 108/122 (88.52%), Query Frame = -2 Query: 256 LGLPVAATVNCSDNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMASVKKGKPDLRKKVMPAVIVRQRNPWRRKDGVFMYFEDNGGVIVIPKGEMKGSAITGPIGKECDDLWPRIASAANDI 621 LGLPV A +NC+DNTGAKNLYIISVKGIKGRLNRLPSA VGDMVMA+VKKGKP+LRKKV PAV++RQR +RRKDGVF+YFEDN GVIV KGEMKGSAITGP+ KEC DLWPRIAS A I Sbjct: 18 LGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CB291303 vs. ExPASy Swiss-Prot
Match: RL23_RAT (60S ribosomal protein L23 OS=Rattus norvegicus GN=Rpl23 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.366e-51 Identity = 98/122 (80.33%), Postives = 108/122 (88.52%), Query Frame = -2 Query: 256 LGLPVAATVNCSDNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMASVKKGKPDLRKKVMPAVIVRQRNPWRRKDGVFMYFEDNGGVIVIPKGEMKGSAITGPIGKECDDLWPRIASAANDI 621 LGLPV A +NC+DNTGAKNLYIISVKGIKGRLNRLP+A VGDMVMA+VKKGKP+LRKKV PAV++RQR +RRKDGVF+YFEDN GVIV KGEMKGSAITGP+ KEC DLWPRIAS A I Sbjct: 18 LGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CB291303 vs. ExPASy Swiss-Prot
Match: RL23_PIG (60S ribosomal protein L23 OS=Sus scrofa GN=RPL23 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.366e-51 Identity = 98/122 (80.33%), Postives = 108/122 (88.52%), Query Frame = -2 Query: 256 LGLPVAATVNCSDNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMASVKKGKPDLRKKVMPAVIVRQRNPWRRKDGVFMYFEDNGGVIVIPKGEMKGSAITGPIGKECDDLWPRIASAANDI 621 LGLPV A +NC+DNTGAKNLYIISVKGIKGRLNRLP+A VGDMVMA+VKKGKP+LRKKV PAV++RQR +RRKDGVF+YFEDN GVIV KGEMKGSAITGP+ KEC DLWPRIAS A I Sbjct: 18 LGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CB291303 vs. ExPASy Swiss-Prot
Match: RL23_MOUSE (60S ribosomal protein L23 OS=Mus musculus GN=Rpl23 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.366e-51 Identity = 98/122 (80.33%), Postives = 108/122 (88.52%), Query Frame = -2 Query: 256 LGLPVAATVNCSDNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMASVKKGKPDLRKKVMPAVIVRQRNPWRRKDGVFMYFEDNGGVIVIPKGEMKGSAITGPIGKECDDLWPRIASAANDI 621 LGLPV A +NC+DNTGAKNLYIISVKGIKGRLNRLP+A VGDMVMA+VKKGKP+LRKKV PAV++RQR +RRKDGVF+YFEDN GVIV KGEMKGSAITGP+ KEC DLWPRIAS A I Sbjct: 18 LGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CB291303 vs. ExPASy Swiss-Prot
Match: RL23_ICTPU (60S ribosomal protein L23 OS=Ictalurus punctatus GN=rpl23 PE=2 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 1.366e-51 Identity = 98/122 (80.33%), Postives = 108/122 (88.52%), Query Frame = -2 Query: 256 LGLPVAATVNCSDNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMASVKKGKPDLRKKVMPAVIVRQRNPWRRKDGVFMYFEDNGGVIVIPKGEMKGSAITGPIGKECDDLWPRIASAANDI 621 LGLPV A +NC+DNTGAKNLYIISVKGIKGRLNRLP+A VGDMVMA+VKKGKP+LRKKV PAV++RQR +RRKDGVF+YFEDN GVIV KGEMKGSAITGP+ KEC DLWPRIAS A I Sbjct: 18 LGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CB291303 vs. ExPASy Swiss-Prot
Match: RL23_HUMAN (60S ribosomal protein L23 OS=Homo sapiens GN=RPL23 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.366e-51 Identity = 98/122 (80.33%), Postives = 108/122 (88.52%), Query Frame = -2 Query: 256 LGLPVAATVNCSDNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMASVKKGKPDLRKKVMPAVIVRQRNPWRRKDGVFMYFEDNGGVIVIPKGEMKGSAITGPIGKECDDLWPRIASAANDI 621 LGLPV A +NC+DNTGAKNLYIISVKGIKGRLNRLP+A VGDMVMA+VKKGKP+LRKKV PAV++RQR +RRKDGVF+YFEDN GVIV KGEMKGSAITGP+ KEC DLWPRIAS A I Sbjct: 18 LGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CB291303 vs. ExPASy Swiss-Prot
Match: RL23_BOVIN (60S ribosomal protein L23 OS=Bos taurus GN=RPL23 PE=2 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 1.366e-51 Identity = 98/122 (80.33%), Postives = 108/122 (88.52%), Query Frame = -2 Query: 256 LGLPVAATVNCSDNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMASVKKGKPDLRKKVMPAVIVRQRNPWRRKDGVFMYFEDNGGVIVIPKGEMKGSAITGPIGKECDDLWPRIASAANDI 621 LGLPV A +NC+DNTGAKNLYIISVKGIKGRLNRLP+A VGDMVMA+VKKGKP+LRKKV PAV++RQR +RRKDGVF+YFEDN GVIV KGEMKGSAITGP+ KEC DLWPRIAS A I Sbjct: 18 LGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139 The following BLAST results are available for this feature:
BLAST of CB291303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CB291303 ID=CB291303; Name=CB291303; organism=Citrus sinensis; type=EST; length=628bpback to top |