CB291329

Overview
NameCB291329
Unique NameCB291329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291329 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 7.955e-83
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = -3
Query:  359 PASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPFGPWSSLDKGFSA 802
            PASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIP GPWSSLDKGFSA
Sbjct:  347 PASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of CB291329 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.406e-63
Identity = 110/147 (74.83%), Postives = 128/147 (87.07%), Query Frame = -3
Query:  359 ASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPFGPWSSLDKGFSA 799
            +SKAVNQRDADL+HFWDK+RKAPEG+P+K EA+KQ  E MSHRMH+D S++L+GKLLFGIEK PE+LN VRPAG  LVDDW CLK++VRTFE+HCG+LSQYGMKHMRS AN+CN GI KE+M EASAQAC  IP  PWSSL +GFSA
Sbjct:  338 SSKAVNQRDADLVHFWDKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of CB291329 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 8.559e-61
Identity = 104/148 (70.27%), Postives = 125/148 (84.46%), Query Frame = -3
Query:  359 PASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPFGPWSSLDKGFSA 802
            P S+  NQRDADL+HFW+KYRKAPEG+ RK EAQKQ  EAMSHR+H+D+S+ L+GK+LFGI +GPE+LN VR AGQPLVDDW CLK+ VR FE HCG+LSQYG+KHMRS ANICN GI  E+M EA++QAC  +P GPWSSL++GFSA
Sbjct:  347 PPSRVTNQRDADLVHFWEKYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of CB291329 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.907e-60
Identity = 107/146 (73.29%), Postives = 126/146 (86.30%), Query Frame = -3
Query:  359 SKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPFGPWSSLDKGFSA 796
            S AVNQRDADL+HFW+K+RKAPEG+ +K EA+KQ  EAMSHR H+D+S+KLIG+LLFGIEKG E+L+ VRPAG PLVD+W CLK++V+TFE+HCG+LSQYGMKHMRS ANICN GI  E MAEASAQAC +IP  PWSSL  GFSA
Sbjct:  348 SAAVNQRDADLIHFWEKFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of CB291329 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 4.396e-57
Identity = 104/148 (70.27%), Postives = 121/148 (81.76%), Query Frame = -3
Query:  359 PASKAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPFGPWSSLDKGFSA 802
            P S+  NQRDADL+HFW KY+KAPEG+ RK EAQKQ  EAMSHR+HVD+SI LIG LLFG+E G  +LN VRP+G+PLVDDW CLKSLVR FE HCG+LSQYG+KHMRS+AN+CN GI   +M EA+ QAC  IP  PWSSLD+GFSA
Sbjct:  332 PPSRVTNQRDADLVHFWHKYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of CB291329 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.571e-38
Identity = 74/145 (51.03%), Postives = 98/145 (67.59%), Query Frame = -3
Query:  359 KAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPFGPWSSLDKGFSA 793
            + VNQRDA+L   W  Y+++  G+ +K E  +Q  +A+ HR H+D S++LIG LLFG +K   IL +VR  G PLVDDWGCLKS+VR FE+ CG+L+QYGMKHMR+ ANICN G+    M EA   AC     G W   ++G+SA
Sbjct:  353 EVVNQRDAELHFMWQLYKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of CB291329 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.599e-37
Identity = 71/145 (48.97%), Postives = 96/145 (66.21%), Query Frame = -3
Query:  359 KAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPFGPWSSLDKGFSA 793
            + VNQRDA+L   W  Y+++   +  K +  KQ  E + HR H+D S++LIG LL+G  KG  +L +VR  G  LVDDW CLKS+VR FE+HCG L+QYGMKHMR+ ANICN+G+ +  M EA   ACE    G +   ++G+SA
Sbjct:  351 EVVNQRDAELFLLWQMYQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of CB291329 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.245e-35
Identity = 70/145 (48.28%), Postives = 96/145 (66.21%), Query Frame = -3
Query:  359 KAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPFGPWSSLDKGFSA 793
            + VNQRDA+LL  W  Y+++     +K +  KQ  E + HR H+D S++LIG LL+G EK   +L +VR  G PLVDDW CLKS+VR +E+HCG+L+QYGMKHMR+ ANICN+G+ +  M +A   AC     G     + G+SA
Sbjct:  349 EVVNQRDAELLFMWQVYQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of CB291329 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 2.123e-35
Identity = 70/126 (55.56%), Postives = 87/126 (69.05%), Query Frame = -3
Query:  410 VNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 787
            VNQRDADLL  W  YR + +G+ +K +  K+  E   HR H+D S++LI  +LFG      +LN VR  G PLVDDW CLKS+VR FE HCG+L+QYGMKHMR+ AN+CN G+ KE M EAS  AC
Sbjct:  344 VNQRDADLLFLWHMYRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPTMN--VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
BLAST of CB291329 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.621e-35
Identity = 69/145 (47.59%), Postives = 94/145 (64.83%), Query Frame = -3
Query:  359 KAVNQRDADLLHFWDKYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPFGPWSSLDKGFSA 793
            + VNQRDA+LL  W  Y+++     +K    +Q  E + HR H+D S++LIG LL+G  K   +L++VR  G PLVDDW CLKS+VR FE+HCG+L+QYGMKHMR+  N+CN+G+ K  M EA   AC     G     + G+SA
Sbjct:  331 EVVNQRDAELLFMWQMYQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
The following BLAST results are available for this feature:
BLAST of CB291329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI7.955e-8399.32Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU2.406e-6374.83Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEG_ARATH8.559e-6170.27Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA1.907e-6073.29Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEA_ARATH4.396e-5770.27Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO1.571e-3851.03Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN6.599e-3748.97Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU1.245e-3548.28Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEB_ARATH2.123e-3555.56Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
LEGU_CANEN3.621e-3547.59Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_02ch07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ch07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291329 ID=CB291329; Name=CB291329; organism=Citrus sinensis; type=EST; length=804bp
TTTTTTTTTTTTTTAATCCAAATTACAGCTTTTATTTCAATCTTTAAAGC
AACACCACGAAGAGGGTTGAGTTGCACGGCCTACAAATCAGGAACAAATA
TAGCTACATAAGCATAAAATAGCATCGCATACATCCAAAATATATACTAT
CAAATTACAACTGCGGTCTGGCAGGGAAGAGCTTTTAAATATAATAATTA
CAAGGAAGCAATCACCACCCAAATGAAAATAAACATTGCCATAAATGGAA
GCAATCATCAGCCAAATGAAAATAGATATTGCCATATTGGCGACTATAAT
GAAAACTAACATATTTCAAGACTGGCTTATGATATTCGCACAGTTCTCGG
CTTCTTTATGCACTGAATCCTTTGTCGAGAGAACTCCAAGGACCAAAAGG
AATATTTTCACAGGCTTGTGCTGATGCTTCAGCCATCTTCTCTTTCCCAA
TTCCTGTATTACAGATGTTTGCAAGAGAACGCATGTGCTTCATTCCATAT
TGCGATAGAGCTCCACAGTGCGACTCAAAAGTCCTCACCAGTGATTTGAG
GCAGCCCCAGTCATCAACAAGAGGCTGACCAGCAGGTCGAACAGTGTTCA
AGATCTCTGGACCTTTCTCAATTCCAAATAAGAGCTTTCCAATAAGTTTG
ATGCTGTGGTCTACATGCATTCTATGAGACATTGCTTCAAAAAACTGCTT
CTGAGCTTCAGCCTTCCTAGGAGTGCCCTCAGGTGCCTTGCGGTACTTGT
CCCAGAAATGCAAGAGATCGGCATCTCGCTGGTTAACAGCTTTAGATGCT
GGCC
back to top