CB291330

Overview
NameCB291330
Unique NameCB291330
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB291330 vs. ExPASy Swiss-Prot
Match: Y4844_ARATH (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.760e-38
Identity = 80/132 (60.61%), Postives = 96/132 (72.73%), Query Frame = -1 
Query:  320 GSSSDTNAKVVEKRKPVFTKVDQLKPGTNGHNLTVNVLKSEPVLPKNRAASPQL------RQTRIAECLVGDDTGTILFTARNDQVDLMKPGTTVILRNAKIDMFKGSMRIAVDKWGRIEATEPAKFVVKED 697
            G+++        KRKPVF KV+QLKPGT GH LTV V+++  V+P  R   P        + +RI ECL+GD+TG ILFTARNDQVDLMKPG TVILRN++IDMFKG+MR+ VDKWGRIEAT  A F VKED
Sbjct:    5 GTAAVATGTSTVKRKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKED 136
The following BLAST results are available for this feature:
BLAST of CB291330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4844_ARATH1.760e-3860.61Uncharacterized protein At4g28440 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_02ch09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ch09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291330 ID=CB291330; Name=CB291330; organism=Citrus sinensis; type=EST; length=862bp
TTTTTTTTTTTTTTTGAGACAACCTTCGTTGTATAAAAGGGCAAAAGAAA
GAGAAAATTATATTAGAATTGGATAATTTATTTTCCCCAGTTCTAGACAT
AATGGCTGATGATAGCACAAGATTACCCAAAGACATTAATCAAATGGAGA
AAAAAAAATCCAACCTTAATTAGATTTGTTTACAAAGCTATAGCCACTGG
AAAATTGCAACATAAATATGCCATGAACGAAGCAGATGAGAAATGATCAT
TTGGAAGAGCTTCTTGGATCATTCTTCAACCACGTTCACCAATTCATACT
CAACAAGGGACAAATTGTTGTCTTCTTTAACAACAAATTTAGCAGGTTCA
GTGGCCTCAATGCGGCCCCATTTGTCAACAGCTATCCTCATAGACCCCTT
AAACATGTCAATCTTTGCGTTACGGAGGATTACTGTGGTGCCCGGCTTCA
TCAAGTCAACTTGATCGTTGCGGGCAGTGAAGAGGATGGTGCCAGTATCG
TCACCGACAAGGCACTCAGCGATTCGGGTTTGGCGGAGCTGTGGGGAAGC
CGCACGATTTTTAGGCAGAACGGGTTCGGACTTCAAGACATTGACGGTCA
AATTGTGACCATTGGTTCCCGGTTTTAGCTGATCCACTTTTGTAAACACA
GGCTTTCTCTTCTCGACAACCTTAGCATTAGTGTCGGAGCTGCTGCCTTG
CTGTTGTTTTTGGGCTTTTTGCTGCTGTTTTGTTGTTCTTGTTGCCATTT
GAAATTTGATTCGAATCTAAGAAAATAGTTTGTTAAAATTTTAAAAGAAA
CAGAACAACAAGTTTCTGATAGTTCCGTTGGATCGGAATTGGATTGTGTT
TTTGTGTTCCTG
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