CB291331

Overview
NameCB291331
Unique NameCB291331
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB291331 vs. ExPASy Swiss-Prot
Match: Y4844_ARATH (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.376e-36
Identity = 76/118 (64.41%), Postives = 89/118 (75.42%), Query Frame = -1 
Query:  304 KRKPVFSKVDQLKPGTNGHNLTVNVLKSEPVLPKNRVASPQL------RQTRIAECLVGDDTGTILFTARNDQVDLMKPGTTVILRNAKIDMFKGSMRIAVDKWGRIEATEPGKFVVK 639
            KRKPVF KV+QLKPGT GH LTV V+++  V+P  R   P        + +RI ECL+GD+TG ILFTARNDQVDLMKPG TVILRN++IDMFKG+MR+ VDKWGRIEAT    F VK
Sbjct:   17 KRKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVK 134
The following BLAST results are available for this feature:
BLAST of CB291331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4844_ARATH2.376e-3664.41Uncharacterized protein At4g28440 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_02ch09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02ch09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291331 ID=CB291331; Name=CB291331; organism=Citrus sinensis; type=EST; length=777bp
ACCTTCGTTGTAAAAAGGGCACACGTTAGAGAAAATTATATTAGAATTGG
ATAATTTATTTTCCCCAGTTCTAGACATAATGGCTGATGATAGCACAAGA
TTACCCAAAGACATTAATCAAATGGAGAAAAAAAAATCCAACCTTAATTA
GATTTGTTTACAAAGCTATAGCCACTGGAAAATTGCAACATAAATATGCC
ATGAACGAAGCAGATGAAAAATGATCATTTGGAAGAACTTCTTGGATCAT
TCTTCAACCACGTTCACCAATTCATACTCAACAAGGGACAAATTGTTGAC
TTCTTTAACAACAAATTTACCAGGTTCAGTGGCCTCAATGCGGCCCCATT
TGTCAACAGCTATCCTCATAGACCCCTTAAACATGTCAATCTTTGCGTTA
CGGAGGATTACTGTGGTGCCCGGCTTCATCAAGTCAACTTGATCGTTGCG
GGCAGTGAACAGGATGGTGCCAGTATCGTCACCAACAAGGCACTCAGCGA
TTCTGGTTTGGCGGAGCTGTGGGGAAGCCACACGATTTTTAGGCAGAACG
GGTTCGGACTTCAAGACATTGACGGTCAAATTGTGACCATTGGTTCCCGG
TTTTAGCTGATCCACTTTTGAAAACACAGGCTTTCTCTTCTCGACAACCT
TAGCATTATTGTCGGAGCTGCTGCCTTGCTGTTGTTTTTGGGCTTTTTGC
TGCTGTTTTGTTGCTCTTGTTGCCATTTGAAATTTGATTCGAATCTAAGA
AAATATTTTGTTAAAATTTTAAAAGAA
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