CB291698

Overview
NameCB291698
Unique NameCB291698
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB291698 vs. ExPASy Swiss-Prot
Match: CRK_DAUCA (CDPK-related protein kinase OS=Daucus carota GN=CRK PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.424e-50
Identity = 102/189 (53.97%), Postives = 136/189 (71.96%), Query Frame = -3
Query:  260 WLRDDSR-PVPLDILIFKLVKSYLHATPFXXXXXXXXXXXLTEDELVYLRAQFRLLEPNKDGSVSLENFRMVLGRNATDAMRESRVPDVLSSMESLAYRKMYFEEFCAAAISTHQLEALEGWEQIASTAFEYFEEEGNRVISIEELARELNVGPS--AYSFLKDWIRNSDGKLSLHGYTKFLHGVTLRS 817
            W+++ +    PLDIL+FKL+K Y+ ++P            LT DEL YL+ QF LLEP K+G++SLEN +  L RN+TDAM++SRV D+L S+ +L YR+M FEEFCAAA+S HQLEAL+ WEQ A  A++ FE++GNR I IEELA EL +GPS   ++ L DWIR++DGKLS  GY K LHGV+ R+
Sbjct:  409 WIKNSNDIKFPLDILVFKLMKVYMRSSPLRKAALRALSKTLTVDELFYLKEQFVLLEPTKNGTISLENIKQALMRNSTDAMKDSRVLDLLVSLNALQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYDLFEKDGNRAIMIEELASELGLGPSIPVHAVLHDWIRHTDGKLSFLGYVKLLHGVSTRA 597          
BLAST of CB291698 vs. ExPASy Swiss-Prot
Match: CAMK1_ORYSJ (Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica GN=CAMK1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.093e-42
Identity = 86/190 (45.26%), Postives = 131/190 (68.95%), Query Frame = -3
Query:  260 PWLRDDSR-PVPLDILIFKLVKSYLHATPFXXXXXXXXXXXLTEDELVYLRAQFRLLEPNKDGSVSLENFRMVLGRNATDAMRESRVPDVLSSMESLAYRKMYFEEFCAAAISTHQLEALEGWEQIASTAFEYFEEEGNRVISIEELARELNVGPSA--YSFLKDWIRNSDGKLSLHGYTKFLHGVTLRS 820
            PW+R      +PLD++I++L+++Y+ ++             LT D++ YLR QF L+ PNK   ++L+N +  L +N+T+AM++SRV D ++++ ++ YRK+ FEEF AAAIS +Q+E LE WEQ A  A+E+F++EGNR I I+ELA EL +GPS   +  L+DWIR+ DGKLS  G+ K LHGV+ R+
Sbjct:  407 PWIRGTEEVKLPLDMIIYRLMRAYISSSSLRRAALRALAKTLTTDQIYYLREQFELIGPNKSDLITLQNLKTALMKNSTNAMKDSRVVDFVNTISNIQYRKLDFEEFSAAAISVYQMEGLETWEQHARQAYEFFDKEGNRPIVIDELASELGLGPSVPLHVVLQDWIRHPDGKLSFLGFMKLLHGVSSRT 596          
BLAST of CB291698 vs. ExPASy Swiss-Prot
Match: CDPKG_ARATH (Calcium-dependent protein kinase 16 OS=Arabidopsis thaliana GN=CPK16 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.217e-19
Identity = 58/195 (29.74%), Postives = 106/195 (54.36%), Query Frame = -3
Query:  248 PWLRD--DSRPVPLDILIFKLVKSYLHATPFXXXXXXXXXXXLTEDELVYLRAQFRLLEPNKDGSVSLENFRMVLGRNATDAMRESRVPDVLSSMESLAYRKMYFEEFCAAAISTHQLEA--LEGWEQIASTAFEYFEEEGNRVISIEELARELNVGPSAYSFLKDWIRNSDGKLSLHGYTKFLHGVTLRSSNTR 820
            PW+R+  D+  +P+DI +   ++ ++  +             L E+EL  LR QF  ++ +K+G +SLE  R  L ++    ++++RV ++L +++S     + F EF AAA+  +QLE    E W+Q +  AFE F+ +G+  I+ EEL     +  S    L++   ++DGK+SL  + + L   +++S N R
Sbjct:  366 PWVREGGDASEIPIDISVLNNMRQFVKFSRLKQFALRALATTLDEEELADLRDQFDAIDVDKNGVISLEEMRQALAKDHPWKLKDARVAEILQAIDSNTDGFVDFGEFVAAALHVNQLEEHDSEKWQQRSRAAFEKFDIDGDGFITAEELRMHTGLKGSIEPLLEEADIDNDGKISLQEFRRLLRTASIKSRNVR 560          
BLAST of CB291698 vs. ExPASy Swiss-Prot
Match: CDPKI_ARATH (Calcium-dependent protein kinase 18 OS=Arabidopsis thaliana GN=CPK18 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.589e-17
Identity = 53/194 (27.32%), Postives = 105/194 (54.12%), Query Frame = -3
Query:  248 WLRD--DSRPVPLDILIFKLVKSYLHATPFXXXXXXXXXXXLTEDELVYLRAQFRLLEPNKDGSVSLENFRMVLGRNATDAMRESRVPDVLSSMESLAYRKMYFEEFCAAAISTHQLEA--LEGWEQIASTAFEYFEEEGNRVISIEELARELNVGPSAYSFLKDWIRNSDGKLSLHGYTKFLHGVTLRSSNTR 817
            W+++  ++  VP+DI +   ++ ++  +             + EDEL  LR QF  ++ +K+GS+SLE  R  L ++    ++++RV ++L + +S     + F EF  AA+  +QLE    E W+Q +  AF+ F+ +G+  I+ EEL  +  +  S    L++   + DG++S++ + + L   +L+S N +
Sbjct:  330 WVKEGGEASEVPIDISVLNNMRQFVKFSRLKQIALRALAKTINEDELDDLRDQFDAIDIDKNGSISLEEMRQALAKDVPWKLKDARVAEILQANDSNTDGLVDFTEFVVAALHVNQLEEHDSEKWQQRSRAAFDKFDIDGDGFITPEELRLQTGLKGSIEPLLEEADVDEDGRISINEFRRLLRSASLKSKNVK 523          
BLAST of CB291698 vs. ExPASy Swiss-Prot
Match: CDPKS_ARATH (Calcium-dependent protein kinase 28 OS=Arabidopsis thaliana GN=CPK28 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.942e-15
Identity = 54/190 (28.42%), Postives = 98/190 (51.58%), Query Frame = -3
Query:  260 WLRD--DSRPVPLDILIFKLVKSYLHATPFXXXXXXXXXXXLTEDELVYLRAQFRLLEPNKDGSVSLENFRMVLGRNATDAMRESRVPDVLSSMESLAYRKMYFEEFCAAAISTHQLEA--LEGWEQIASTAFEYFEEEGNRVISIEELARELNVGPSAYSFLKDWIRNSDGKLSLHGYTKFLHGVTLRS 817
            W+R+  ++  +P+DI +   ++ ++  +             L E E+  LR QF  ++ +K+G +SLE  R  L ++    +++SRV ++L +++S     + F EF AAA+  HQLE    E W+  +  AFE F+ + +  I+ EEL     +  S    L +   + DGK+SLH + + L   ++ S
Sbjct:  321 WVREGGNATDIPVDISVLNNLRQFVRYSRLKQFALRALASTLDEAEISDLRDQFDAIDVDKNGVISLEEMRQALAKDLPWKLKDSRVAEILEAIDSNTDGLVDFTEFVAAALHVHQLEEHDSEKWQLRSRAAFEKFDLDKDGYITPEELRMHTGLRGSIDPLLDEADIDRDGKISLHEFRRLLRTASISS 510          
The following BLAST results are available for this feature:
BLAST of CB291698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CRK_DAUCA1.424e-5053.97CDPK-related protein kinase OS=Daucus carota GN=CR... [more]
CAMK1_ORYSJ1.093e-4245.26Calcium/calmodulin-dependent serine/threonine-prot... [more]
CDPKG_ARATH2.217e-1929.74Calcium-dependent protein kinase 16 OS=Arabidopsis... [more]
CDPKI_ARATH1.589e-1727.32Calcium-dependent protein kinase 18 OS=Arabidopsis... [more]
CDPKS_ARATH1.942e-1528.42Calcium-dependent protein kinase 28 OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_03bd03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_03bd03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB291698 ID=CB291698; Name=CB291698; organism=Citrus sinensis; type=EST; length=822bp
TTTTTTTTTTTTTTTGAACTCAAAACCATAATCTATATATGGCTTTCAAA
AAATAGGGCATGAGCAAAGAAGAAAATTTTCAATGTAAATTTGCCTCAAC
ATTCTCATAACTGACTTTGACTATCATTCATATTTATGCACATCTTTCTG
TACCCCCTCTCCCCGGAAGAAAAAAACAAACCCCCAAGTTCTCCAAACGC
ATGAATTTTTAAAGAAACTATATGTCAAAAGCTAAAAACTAATGGTGTCT
TGTGTTTGAGCTACGGAGGGTCACACCATGTAAAAATTTTGTATATCCAT
GTAAACTAAGTTTTCCGTCCGAGTTTCTAATCCAATCTTTGAGAAACGAA
TAAGCTGAAGGACCAACATTCAATTCCCTTGCCAATTCCTCTATTGAAAT
GACTCGGTTGCCCTCCTCCTCAAAATACTCGAAAGCAGTGGAAGCTATCT
GTTCCCACCCTTCAAGGGCCTCCAATTGATGCGTGCTGATTGCAGCGGCG
CAAAACTCTTCAAAATACATCTTCCTATAAGCAAGAGATTCCATTGAACT
AAGAACATCAGGAACCCTTGATTCTCTCATGGCATCAGTTGCATTTCGCC
CTAGCACCATTCTGAAATTTTCAAGAGATACGCTCCCATCTTTGTTTGGT
TCCAACAACCTAAACTGAGCTCTAAGATACACCAACTCATCCTCAGTCAA
TGCTTTTGAAAGAGCCTTTAGTGCCGCACGTTTGAAAGGTGTAGCATGAA
GGTATGACTTTACCAACTTGAAGATCAATATATCCAAAGGTACTGGACGA
CTATCATCACGCAACCATGGGT
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