CB292659

Overview
NameCB292659
Unique NameCB292659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB292659 vs. ExPASy Swiss-Prot
Match: ATPO_IPOBA (ATP synthase subunit O, mitochondrial OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 4.095e-61
Identity = 121/193 (62.69%), Postives = 146/193 (75.65%), Query Frame = -2
Query:  247 KEQKVKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKFRARQMERFLREPIHF 825
            KEQK+KVPL ++G SGNYASALY+AAVK+N LEKVESE+ DLVEASKK+ T+ QF +D SVP +TRV AI EIC QAKF D T++FL++LAENGRL+++D I KRF ELTMAH+GEVK TVT+VI                 +           +DP+ILGGLVVEFGQKVFDMSI+ RARQMERFLREP++F
Sbjct:   52 KEQKIKVPLTMYGVSGNYASALYLAAVKSNTLEKVESELYDLVEASKKSPTFSQFMRDPSVPVDTRVNAIKEICAQAKFGDTTQNFLLILAENGRLKHIDRIVKRFKELTMAHRGEVKATVTTVIPLPADEEKELKATLQEMVGQGKSVQIEQKIDPTILGGLVVEFGQKVFDMSIRTRARQMERFLREPLNF 244          
BLAST of CB292659 vs. ExPASy Swiss-Prot
Match: ATPO_ARATH (ATP synthase subunit O, mitochondrial OS=Arabidopsis thaliana GN=At5g13450 PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 1.046e-48
Identity = 102/197 (51.78%), Postives = 134/197 (68.02%), Query Frame = -2
Query:  238 QKEQKVKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKFRARQMERFLREPIHFGTL 828
            Q    VKVP+AL G +GN+AS LYIAAVK N+LEK+E+++ +++EA K A  + QFTKD SVP  TR+ AI + C QAKF++ TK+FL +LAENG+L+NLD I K+F++LT AH+G+VKV VT+VI                 +           +DPSI GGL+VEF QKV DMSI+ RA+QMER LREP+ F  L
Sbjct:   42 QTTANVKVPIALVGENGNFASWLYIAAVKMNSLEKIETDLSEMIEAMKTAPIFAQFTKDPSVPRGTRLAAIRDACDQAKFAEPTKNFLSLLAENGKLKNLDAIVKKFMQLTNAHRGDVKVLVTTVIPLPPAEEKELTETLQEIIGAGKKITVEQKIDPSIYGGLIVEFQQKVLDMSIRTRAQQMERLLREPVDFNNL 238          
BLAST of CB292659 vs. ExPASy Swiss-Prot
Match: ATPO_PONAB (ATP synthase subunit O, mitochondrial OS=Pongo abelii GN=ATP5O PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.780e-23
Identity = 64/185 (34.59%), Postives = 96/185 (51.89%), Query Frame = -2
Query:  259 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKFRARQMERFLRE 813
            V+ P+ ++G  G YA+ALY AA K N LE+VE E+L + +  K+            V    +VK++N+I  + +FS +T + + +LAENGRL N   +   F  +  AH+GEV  TVTS                   L            DPSILGG++V  G+K  DMS+K + +++ R +RE
Sbjct:   28 VRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAAPVLNPY-VKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSAHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGEKYVDMSVKTKIQKLSRAMRE 211          
BLAST of CB292659 vs. ExPASy Swiss-Prot
Match: ATPO_HUMAN (ATP synthase subunit O, mitochondrial OS=Homo sapiens GN=ATP5O PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.197e-22
Identity = 63/185 (34.05%), Postives = 95/185 (51.35%), Query Frame = -2
Query:  259 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKFRARQMERFLRE 813
            V+ P+ ++G  G YA+ALY AA K N LE+VE E+L + +  K+            V    +VK++N+I  + +FS +T + + +LAENGRL N   +   F  +   H+GEV  TVTS                   L            DPSILGG++V  G+K  DMS+K + +++ R +RE
Sbjct:   28 VRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASVLNPY-VKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGEKYVDMSVKTKIQKLGRAMRE 211          
BLAST of CB292659 vs. ExPASy Swiss-Prot
Match: ATPO_RHIFE (ATP synthase subunit O, mitochondrial OS=Rhinolophus ferrumequinum GN=ATP5O PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.090e-21
Identity = 59/185 (31.89%), Postives = 95/185 (51.35%), Query Frame = -2
Query:  259 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKFRARQMERFLRE 813
            V+ P+ ++G  G YA+ALY AA K N LE+VE E+L + +  K+            +    +VK++N++ T+ KFS +T + + +LAENGRL N   +   F  +   H+GEV  +VT+                   L            DPSI+GG+++  G+K  DMS K + +++ R +RE
Sbjct:   28 VRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVAQLLKEPKMAASIMNPY-IKRSIKVKSLNDMTTKEKFSPLTSNLMNLLAENGRLNNTPGVISAFSTIMSVHRGEVPCSVTTASPLDEATLSELKTVLQSFLSKNQILKLEVKTDPSIMGGMIIRIGEKYVDMSAKTKIQKLSRVMRE 211          
BLAST of CB292659 vs. ExPASy Swiss-Prot
Match: ATPO_BOVIN (ATP synthase subunit O, mitochondrial OS=Bos taurus GN=ATP5O PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.410e-21
Identity = 60/185 (32.43%), Postives = 95/185 (51.35%), Query Frame = -2
Query:  259 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKFRARQMERFLRE 813
            V+ P+ ++G  G YA+ALY AA K N LE+VE E+L + +  K+            V    +VK+++++  + KFS +T + + +LAENGRL N   +   F  +   H+GEV  TVT+                   L           +DPSI+GG++V  G+K  DMS K + +++ R +RE
Sbjct:   28 VRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQILKEPKMAASLLNPY-VKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRGEVPCTVTTASALDEATLTELKTVLKSFLSKGQVLKLEVKIDPSIMGGMIVRIGEKYVDMSAKTKIQKLSRAMRE 211          
BLAST of CB292659 vs. ExPASy Swiss-Prot
Match: ATPO_PIG (ATP synthase subunit O, mitochondrial OS=Sus scrofa GN=ATP5O PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.507e-20
Identity = 59/185 (31.89%), Postives = 95/185 (51.35%), Query Frame = -2
Query:  259 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKFRARQMERFLRE 813
            V+ P+ ++G  G YA+ALY AA K N LE+VE E+L + +  K+            V    +VK+++++  + KFS +T + + +LAENGRL +   +   F  +   H+GEV  +VT+                   L           VDPSI+GG++V  G+K  DMS K + +++ R +RE
Sbjct:   28 VRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASIMNPY-VKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLSSTPGVISAFSTMMSVHRGEVPCSVTTASPLDEATLTELKTVLKSFLSKGQILKLEVKVDPSIMGGMIVRIGEKYVDMSAKTKIQKLSRAMRE 211          
BLAST of CB292659 vs. ExPASy Swiss-Prot
Match: ATPO_CALJA (ATP synthase subunit O, mitochondrial OS=Callithrix jacchus GN=ATP5O PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.507e-20
Identity = 59/187 (31.55%), Postives = 94/187 (50.27%), Query Frame = -2
Query:  253 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKFRARQMERFLREPI 813
            V+ P+ ++G  G YA+ALY AA K   LE+VE E+L + +  K+            V    +VK++++I  + +FS +T + + +LAENGRL N   +   F  +   H+GEV  TVT+                   L            DPSI+GG++V  G+K  DMS K + +++ + +RE I
Sbjct:   28 VRPPVQVYGVEGRYATALYSAASKQKKLEQVEKELLRVAQILKEPKVAASVLNPY-VKHSIKVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTTASPLEEATLSELKTVLKSFLSQGQILKLEVKTDPSIMGGMIVRIGEKYVDMSAKTKIQKLSKAMREVI 213          
BLAST of CB292659 vs. ExPASy Swiss-Prot
Match: ATPO_CALMO (ATP synthase subunit O, mitochondrial OS=Callicebus moloch GN=ATP5O PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.580e-20
Identity = 58/187 (31.02%), Postives = 94/187 (50.27%), Query Frame = -2
Query:  253 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKFRARQMERFLREPI 813
            V+ P+ ++G  G YA+ALY AA K   LE+VE E+L + +  K+            V    +VK++++I  + +FS +T + + +LAENGRL N   +   F  +   H+GE+  TVT+                   L            DPSI+GG++V  G+K  DMS K + +++ + +RE I
Sbjct:   28 VRPPVQVYGIEGRYATALYSAASKQKKLEQVEKELLRVAQILKEPKVAASVLNPY-VKHSVKVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEIPCTVTTASPLEETTLSELKTVLKSFLSQGQILKLEVKTDPSIMGGMIVRIGEKYVDMSAKTKIQKLSKAMREVI 213          
BLAST of CB292659 vs. ExPASy Swiss-Prot
Match: ATPO_SORAR (ATP synthase subunit O, mitochondrial OS=Sorex araneus GN=ATP5O PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.982e-20
Identity = 58/185 (31.35%), Postives = 92/185 (49.73%), Query Frame = -2
Query:  259 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIXXXXXXXXXXXXXXXXXLXXXXXXXXXXXVDPSILGGLVVEFGQKVFDMSIKFRARQMERFLRE 813
            V+ P+ ++G  G YA+ALY AA K N L++VE E+L + +  K+            V    +VK+I ++  + K S +T + + +LAENGRL N   I   F  +   H+GEV  TVT+                   L            DPSI+GG++V  G+K  DMS + + +++ + +RE
Sbjct:   28 VRPPIQIYGVEGRYATALYSAASKQNKLDQVEKELLRVAQLLKEPKLAASILNP-HVKRAIKVKSIGDLTAREKLSPITTNLINLLAENGRLNNTPGIISAFSTMMSVHRGEVPCTVTTASALPEATLSELKTVLQSFLSKNQVLKLEVKTDPSIMGGMIVRIGEKYVDMSARTKIQKLSKAMRE 211          
The following BLAST results are available for this feature:
BLAST of CB292659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
ATPO_IPOBA4.095e-6162.69ATP synthase subunit O, mitochondrial OS=Ipomoea b... [more]
ATPO_ARATH1.046e-4851.78ATP synthase subunit O, mitochondrial OS=Arabidops... [more]
ATPO_PONAB5.780e-2334.59ATP synthase subunit O, mitochondrial OS=Pongo abe... [more]
ATPO_HUMAN2.197e-2234.05ATP synthase subunit O, mitochondrial OS=Homo sapi... [more]
ATPO_RHIFE1.090e-2131.89ATP synthase subunit O, mitochondrial OS=Rhinoloph... [more]
ATPO_BOVIN5.410e-2132.43ATP synthase subunit O, mitochondrial OS=Bos tauru... [more]
ATPO_PIG3.507e-2031.89ATP synthase subunit O, mitochondrial OS=Sus scrof... [more]
ATPO_CALJA3.507e-2031.55ATP synthase subunit O, mitochondrial OS=Callithri... [more]
ATPO_CALMO4.580e-2031.02ATP synthase subunit O, mitochondrial OS=Callicebu... [more]
ATPO_SORAR5.982e-2031.35ATP synthase subunit O, mitochondrial OS=Sorex ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_04dd11_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_04dd11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB292659 ID=CB292659; Name=CB292659; organism=Citrus sinensis; type=EST; length=832bp
TTTTTTTTTTTTTTTTTAACAAAAAATGTTGATCCCTTTCAAAACCATTT
GCCATGAAAGCAAAGTGATCAAGACCCGAATTTTATTTTGCCAATGATTC
AATTCATTCAGAAATGGCGGAGCACAAGCAAACAGCATCAAACAAGAGCT
TGAATGGTTCTTTTACTTCTTGGAGCGTTCCAGTTGTTGCATAATCATCT
TAAAAATTTGCGCCCTGGGGCTGTGGCAGCCTTTTTAGAGGGTGCCAAAA
TGAATGGGCTCACGTAGGAACCTCTCCATCTGCCGCGCCCTAAACTTAAT
GGACATGTCAAACACCTTTTGCCCAAACTCTACTACGAGCCCACCAAGAA
TGCTAGGATCAACCTTCTGTTCAACCTTGACTTTCTTCCCTTGGCCAAGT
GTCTCTTGCAGTGTCTCTTTCAACTCTCTCTCTTCTTCTGGGGGAAGTGG
AATAACGGATGTAACAGTAACTTTTACTTCGCCCTTGTGTGCCATGGTTA
ACTCCACAAACCTCTTAGCGATGGTGTCTAAGTTTCTAAGCCTCCCATTC
TCAGCCAAAACAACTAAAAAGTGCTTCGTAACATCTGAAAATTTAGCCTG
AGTACAGATTTCGTTAATGGCCTTAACTCTTGTCTCTGCAGGCACAGACA
AGTCCTTTGTGAACTGAAAATATGTATCAGCCTTCTTTGAAGCCTCGACA
AGGTCAAGAATCTCAGACTCAACCTTCTCCAGTGCGTTAGTTTTCACTGC
GGCAATGTACAGAGCAGAGGCATAATTTCCTGAACCTCCAAACAAAGCCA
GAGGCACCTTAACTTTCTGCTCCTTCTGCACC
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