CB292661

Overview
NameCB292661
Unique NameCB292661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB292661 vs. ExPASy Swiss-Prot
Match: HYES_RAT (Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.389e-12
Identity = 66/232 (28.45%), Postives = 112/232 (48.28%), Query Frame = -1
Query:  254 INKVFLVAKDFEARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNIYILFSRSEIPIAPENKEI-MDLVDASTPLPPWL----TAEDLATYGALYEKSGFRTALQVPYRSIHE--KFSLPEL--TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNKHV 910
            I +   +  D+     +  AL HPERV  V +L  P +PP       E  +S+P   Y   +QEPG AEA+  ++ ++T         +  ++ +   NK   M  +   TP  P +    T E++  Y   ++KSGFR  L   YR+     K+S   L   + VPAL++  EKD  L+ P +     S  +++++P L+   + +  H+ Q + P EVNQ+++ +L   +
Sbjct:  324 IPQAVFIGHDWAGVLVWNMALFHPERVRAVASLNTPLMPPNPEVSPMEVIRSIPVFNYQLYFQEPGVAEAELEKNMSRTFKS---FFRTSDDMGLLTVNKATEMGGILVGTPEDPKVSKITTEEEIEYYIQQFKKSGFRGPLNW-YRNTERNWKWSCKALGRKILVPALMVTAEKDIVLR-PEM-----SKNMENWIPFLKRGHIEDCGHWTQIEKPAEVNQILIKWLKTEI 545          
BLAST of CB292661 vs. ExPASy Swiss-Prot
Match: HYES_HUMAN (Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.814e-12
Identity = 65/229 (28.38%), Postives = 111/229 (48.47%), Query Frame = -1
Query:  263 INKVFLVAKDFEARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNIYILFSRSEIPIAPENK--EIMDLVDASTPLPP---WLTAEDLATYGALYEKSGFRTALQVPYRSIHE--KFSLPEL--TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLN 910
            +++   +  D+     +  AL +PERV  V +L  PFIP        E  K+ P   Y   +QEPG AEA+      + + R    LF  S+  +   +K  E   L   S   P     +T E++  Y   ++KSGFR  L   YR++    K++   L   + +PAL++  EKD+ L  P +  +     ++D++P+L+   + +  H+ Q   P EVNQ+++ +L+
Sbjct:  326 LSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQEPGVAEAEL----EQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNW-YRNMERNWKWACKSLGRKILIPALMVTAEKDFVL-VPQMSQH-----MEDWIPHLKRGHIEDCGHWTQMDKPTEVNQILIKWLD 543          
BLAST of CB292661 vs. ExPASy Swiss-Prot
Match: HYES_MOUSE (Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.277e-12
Identity = 65/231 (28.14%), Postives = 114/231 (49.35%), Query Frame = -1
Query:  254 INKVFLVAKDFEARPAYLFALLHPERVSGVITLGVPFIPP----GTAEFHKSLPEGFYISRWQEPGRAEADFGRHDAKTVVRNIYILFSRSEIPIAPENKEIMDLVDASTPLPPWL----TAEDLATYGALYEKSGFRTALQVPYRSIHE--KFSLPEL--TVKVPALLILGEKDYFLKFPGIEDYIRSGKVKDFVPNLEIIRLSEGSHFVQEQSPEEVNQLVLTFLNKHV 910
            I +   +  D+     +  AL +PERV  V +L  PF+PP       +  +S+P   Y   +QEPG AEA+  ++ ++T  ++ +     +      +  EI  ++  +TP  P L    T E++  Y   ++K+GFR  L   YR+     K+S   L   + VPAL++  EKD  L+ P +     S  ++ ++P L+   + +  H+ Q + P EVNQ+++ +L   V
Sbjct:  324 IPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQLYFQEPGVAEAELEKNMSRT-FKSFFRASDETGFIAVHKATEIGGIL-VNTPEDPNLSKITTEEEIEFYIQQFKKTGFRGPLNW-YRNTERNWKWSCKGLGRKILVPALMVTAEKDIVLR-PEM-----SKNMEKWIPFLKRGHIEDCGHWTQIEKPTEVNQILIKWLQTEV 545          
The following BLAST results are available for this feature:
BLAST of CB292661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
HYES_RAT1.389e-1228.45Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 ... [more]
HYES_HUMAN1.814e-1228.38Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 ... [more]
HYES_MOUSE5.277e-1228.14Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_04dd12_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_04dd12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB292661 ID=CB292661; Name=CB292661; organism=Citrus sinensis; type=EST; length=910bp
TTTTTTTTTTTTTTTGAGTTAAATAGCTTTCAAGGCTGCCCTTACATTTG
TCCAAAATAGTACACTTTATAGCATCTGAAATATCCATTACACGCCCACC
TACAGTCCACAGAGGGAGAGTATACTTTGCCCGATATAAATGACACAGAC
ACACTGATTATTCAAGTACATGGATGTATTTCTTAAGGACTCAACACACT
GGAGTCTTTGTGAACTCATGGACATACGCACTTCATGCAAGCCTTGGGAA
TCATACATGTTTGTTGAGGAAGGTGAGGACTAGCTGGTTCACCTCTTCTG
GTGATTGCTCTTGAACAAAATGACTCCCTTCAGACAAACGTATGATCTCC
AAATTGGGAACAAAGTCCTTTACCTTGCCACTTCTTATGTAGTCCTCAAT
CCCAGGAAATTTGAGGAAGTAATCTTTTTCACCCAATATCAGTAGTGCTG
GAACTTTAACCGTTAGTTCTGGTAAGCTGAACTTTTCATGGATTGACCTA
TATGGAACTTGCAATGCAGTTCGAAATCCAGACTTCTCGTACAAAGCTCC
ATAAGTAGCAAGATCTTCCGCTGTGAGCCAAGGTGGAAGAGGAGTAGAAG
CATCCACCAAATCCATGATCTCCTTGTTTTCAGGTGCTATTGGTATTTCA
CTTCTGGAGAAAAGAATGTAAATGTTTCTCACCACAGTCTTTGCATCATG
GCGACCAAAATCAGCTTCTGCTCGTCCAGGTTCCTGCCATCTCGATATGT
AGAAACCTTCAGGAAGGGATTTGTGAAATTCAGCAGTACCTGGAGGTATA
AACGGCACTCCTAATGTAATAACACCGGAGACCCTCTCTGGGTGTAGAAG
TGCAAACAGGTAGGCAGGCCGGGCTTCAAAATCTTTTGCAACAAGAAAAA
CCTTGTTAAT
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