CB292682

Overview
NameCB292682
Unique NameCB292682
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB292682 vs. ExPASy Swiss-Prot
Match: ACO1_ARATH (Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2)

HSP 1 Score: 375.941 bits (964), Expect = 1.553e-103
Identity = 183/204 (89.71%), Postives = 195/204 (95.59%), Query Frame = -3
Query:  247 DSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLI 858
            DSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIR+VNK L GEVGPKT+HIPTGEKLSVFDAAM+Y+NEG DT+ILAGAEYGSGSSRDWAAKGPMLLGVKAVI+KSFERIHRSNLVGMGIIPLCFK GEDAET GLTG E YTI+LPN+VSEI+PGQDV VVT++GKSFTC +RFDTEVELAYFDHGGILQYVIRNLI
Sbjct:  693 DSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRIVNKHLKGEVGPKTVHIPTGEKLSVFDAAMKYRNEGRDTIILAGAEYGSGSSRDWAAKGPMLLGVKAVISKSFERIHRSNLVGMGIIPLCFKAGEDAETLGLTGQELYTIELPNNVSEIKPGQDVTVVTNNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLI 896          
BLAST of CB292682 vs. ExPASy Swiss-Prot
Match: ACOC_ORYSJ (Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 7.708e-103
Identity = 176/203 (86.70%), Postives = 194/203 (95.57%), Query Frame = -3
Query:  250 DSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 858
            DSPAAKYL+ERGVDR+DFNSYGSRRGNDE+MARGTFANIR+VNK LNGEVGPKT+H+PTGEKL VFDAA++YK+EGHDT++LAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDA++ GLTGHERYTIDLP +VSEIRPGQD+ V TD+GKSFTC +RFDTEVELAYF+HGGIL YVIRNL
Sbjct:  693 DSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRIVNKFLNGEVGPKTVHVPTGEKLYVFDAALKYKSEGHDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERYTIDLPTNVSEIRPGQDITVTTDNGKSFTCTLRFDTEVELAYFNHGGILPYVIRNL 895          
BLAST of CB292682 vs. ExPASy Swiss-Prot
Match: ACOC_SOLTU (Aconitate hydratase, cytoplasmic (Fragment) OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 370.933 bits (951), Expect = 4.996e-102
Identity = 178/203 (87.68%), Postives = 193/203 (95.07%), Query Frame = -3
Query:  250 DSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 858
            DSPAA+YLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKT+H+P+GEKLSVFDAAM+YK+ G  T+ILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGI+PLCFK GEDA+T GLTG ERYTIDLP ++SEIRPGQDV V TD+GKSFTC++RFDTEVELAYF+HGGILQYVIR L
Sbjct:  411 DSPAARYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTVHVPSGEKLSVFDAAMKYKSAGQSTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIVPLCFKAGEDADTLGLTGQERYTIDLPENISEIRPGQDVTVQTDTGKSFTCIVRFDTEVELAYFNHGGILQYVIRQL 613          
BLAST of CB292682 vs. ExPASy Swiss-Prot
Match: ACO2M_ARATH (Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2)

HSP 1 Score: 369.777 bits (948), Expect = 1.113e-101
Identity = 178/203 (87.68%), Postives = 191/203 (94.09%), Query Frame = -3
Query:  250 DSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 858
            DSPAAK+LMERGVDR+DFNSYGSRRGNDEIMARGTFANIR+VNKL+NGEVGPKT+HIP+GEKLSVFDAAMRYK+ G DT+ILAGAEYGSGSSRDWAAKGPML GVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDA+T GLTGHERYTI LP  +SEIRPGQDV V TD+GKSFTC +RFDTEVELAYF+HGGIL YVIRNL
Sbjct:  785 DSPAAKFLMERGVDRKDFNSYGSRRGNDEIMARGTFANIRIVNKLMNGEVGPKTVHIPSGEKLSVFDAAMRYKSSGEDTIILAGAEYGSGSSRDWAAKGPMLQGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIHLPTDISEIRPGQDVTVTTDNGKSFTCTVRFDTEVELAYFNHGGILPYVIRNL 987          
BLAST of CB292682 vs. ExPASy Swiss-Prot
Match: ACOC_CUCMA (Aconitate hydratase, cytoplasmic OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 9.422e-101
Identity = 175/204 (85.78%), Postives = 194/204 (95.10%), Query Frame = -3
Query:  247 DSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLI 858
            DSPAAKYL+ERGVDR+DFNSYGSRRGNDE+MARGTFANIRLVNKLL+GEVGPKT+H+PTGEKLSVF+AA +YK+ G DT++LAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDA++ GLTGHERYTIDLP+ +S+IRPGQDV V TDSGKSFTC +RFDTEVELAYF++GGIL YVIRNLI
Sbjct:  693 DSPAAKYLLERGVDRKDFNSYGSRRGNDEVMARGTFANIRLVNKLLDGEVGPKTVHVPTGEKLSVFEAAEKYKSAGQDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADSLGLTGHERYTIDLPDDISKIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFNNGGILPYVIRNLI 896          
BLAST of CB292682 vs. ExPASy Swiss-Prot
Match: ACO3M_ARATH (Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana GN=ACO3 PE=1 SV=2)

HSP 1 Score: 347.436 bits (890), Expect = 5.915e-95
Identity = 168/202 (83.17%), Postives = 181/202 (89.60%), Query Frame = -3
Query:  250 SPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 855
            SPAAK+LM+RGV   DFNSYGSRRGNDE+MARGTFANIR+VNKLL GEVGP T+HIPTGEKLSVFDAA +YK    DT+ILAGAEYGSGSSRDWAAKGP+LLGVKAVIAKSFERIHRSNL GMGIIPLCFK GEDAET GLTGHERYT+ LP  VS+IRPGQDV V TDSGKSF C +RFDTEVELAY+DHGGIL YVIR+L
Sbjct:  791 SPAAKFLMDRGVISEDFNSYGSRRGNDEVMARGTFANIRIVNKLLKGEVGPNTVHIPTGEKLSVFDAASKYKTAEQDTIILAGAEYGSGSSRDWAAKGPLLLGVKAVIAKSFERIHRSNLAGMGIIPLCFKAGEDAETLGLTGHERYTVHLPTKVSDIRPGQDVTVTTDSGKSFVCTLRFDTEVELAYYDHGGILPYVIRSL 992          
BLAST of CB292682 vs. ExPASy Swiss-Prot
Match: ACOC_CUCMC (Aconitate hydratase (Fragment) OS=Cucumis melo var. conomon GN=ACO PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.611e-92
Identity = 171/208 (82.21%), Postives = 187/208 (89.90%), Query Frame = -3
Query:  244 DSPAAKYLMERGVDRRDFNSYGSRRGNDEIMAR---GTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNLIN 858
            DSPAAKYL+ERGVDRRDFNSYG       +M R     FANIR+VNKLL GEVGPKTIHIP+ EKLSVFDAAMRYK+EG DT+ILAGAEYG GSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK GEDA++ GLTGHER+TIDLP++V EIRPGQDV VVTD+GKSF+C++RFDTEVELAYFDHGGILQYVIRNLI+
Sbjct:  558 DSPAAKYLLERGVDRRDFNSYGVA----VVMMRLWHVHFANIRIVNKLLKGEVGPKTIHIPSREKLSVFDAAMRYKSEGQDTIILAGAEYGIGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFTIDLPSNVGEIRPGQDVAVVTDTGKSFSCILRFDTEVELAYFDHGGILQYVIRNLIH 761          
BLAST of CB292682 vs. ExPASy Swiss-Prot
Match: ACOC_CHICK (Cytoplasmic aconitate hydratase OS=Gallus gallus GN=ACO1 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.418e-72
Identity = 131/203 (64.53%), Postives = 165/203 (81.28%), Query Frame = -3
Query:  250 DSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 858
            +SPAA+YL  RG+  R+FNSYGSRRGND +MARGTFANIRLVNK ++ + GP+TIH P+GE L VFDAA RYK  GH  ++LAG EYG+GSSRDWAAKGP LLGVKAV+A+S+ERIHRSNLVGMG+IPL + PGEDA T GLTG ERYTI +P +   ++P  ++++  D+GK+F  ++RFDT+VEL YF +GGIL Y+IR +
Sbjct:  689 NSPAARYLTSRGLTPREFNSYGSRRGNDAVMARGTFANIRLVNKFIDKQ-GPQTIHFPSGETLDVFDAAERYKQAGHPLIVLAGKEYGAGSSRDWAAKGPFLLGVKAVLAESYERIHRSNLVGMGVIPLQYLPGEDARTLGLTGRERYTIIIPEN---LKPQMNIQIKLDTGKTFHAIMRFDTDVELTYFHNGGILNYMIRKM 887          
BLAST of CB292682 vs. ExPASy Swiss-Prot
Match: ACOC_RABIT (Cytoplasmic aconitate hydratase OS=Oryctolagus cuniculus GN=ACO1 PE=1 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.568e-71
Identity = 132/203 (65.02%), Postives = 165/203 (81.28%), Query Frame = -3
Query:  250 DSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 858
            +SPAA+YL  RG+  R+FNSYGSRRGND IMARGTFANIRL+N+ LN +  P+TIH+P+GE L VFDAA RY+ EGH  ++LAG EYGSGSSRDWAAKGP LLG+KAV+A+S+ERIHRSNLVGMG+IPL + PGE+A++ GLTG ERYTI +P +++   P   V+V  D+GK+F  VIRFDT+VEL Y  +GGIL Y+IR +
Sbjct:  689 NSPAARYLTNRGLTPREFNSYGSRRGNDAIMARGTFANIRLLNRFLNKQA-PQTIHLPSGETLDVFDAAERYQQEGHPLIVLAGKEYGSGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADSLGLTGRERYTIIIPENLT---PRMHVQVKLDTGKTFQAVIRFDTDVELTYLHNGGILNYMIRKM 887          
BLAST of CB292682 vs. ExPASy Swiss-Prot
Match: ACOC_MOUSE (Cytoplasmic aconitate hydratase OS=Mus musculus GN=Aco1 PE=1 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 1.327e-70
Identity = 129/203 (63.55%), Postives = 164/203 (80.79%), Query Frame = -3
Query:  250 DSPAAKYLMERGVDRRDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLSVFDAAMRYKNEGHDTVILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDAETHGLTGHERYTIDLPNSVSEIRPGQDVRVVTDSGKSFTCVIRFDTEVELAYFDHGGILQYVIRNL 858
            +SPAA+YL  RG+  R+FNSYGSRRGND IMARGTFANIRL+NK LN +  P+T+H+P+GE L VFDAA RY+  G   ++LAG EYGSGSSRDWAAKGP LLG+KAV+A+S+ERIHRSNLVGMG+IPL + PGE A++ GLTG ERYTI++P    +++P   V++  D+GK+F  V+RFDT+VEL YF +GGIL Y+IR +
Sbjct:  689 NSPAARYLTNRGLTPREFNSYGSRRGNDAIMARGTFANIRLLNKFLNKQA-PQTVHLPSGETLDVFDAAERYQQAGLPLIVLAGKEYGSGSSRDWAAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGETADSLGLTGRERYTINIP---EDLKPRMTVQIKLDTGKTFQAVMRFDTDVELTYFHNGGILNYMIRKM 887          
The following BLAST results are available for this feature:
BLAST of CB292682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
ACO1_ARATH1.553e-10389.71Aconitate hydratase 1 OS=Arabidopsis thaliana GN=A... [more]
ACOC_ORYSJ7.708e-10386.70Putative aconitate hydratase, cytoplasmic OS=Oryza... [more]
ACOC_SOLTU4.996e-10287.68Aconitate hydratase, cytoplasmic (Fragment) OS=Sol... [more]
ACO2M_ARATH1.113e-10187.68Aconitate hydratase 2, mitochondrial OS=Arabidopsi... [more]
ACOC_CUCMA9.422e-10185.78Aconitate hydratase, cytoplasmic OS=Cucurbita maxi... [more]
ACO3M_ARATH5.915e-9583.17Aconitate hydratase 3, mitochondrial OS=Arabidopsi... [more]
ACOC_CUCMC1.611e-9282.21Aconitate hydratase (Fragment) OS=Cucumis melo var... [more]
ACOC_CHICK1.418e-7264.53Cytoplasmic aconitate hydratase OS=Gallus gallus G... [more]
ACOC_RABIT1.568e-7165.02Cytoplasmic aconitate hydratase OS=Oryctolagus cun... [more]
ACOC_MOUSE1.327e-7063.55Cytoplasmic aconitate hydratase OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_04de12_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_04de12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB292682 ID=CB292682; Name=CB292682; organism=Citrus sinensis; type=EST; length=860bp
TTTTTTTTTTTTCATAATTATTCTCTTATTGCGGGAACTTCATGTCTAGG
GCGTGTCCTATTGTTTATCAAAGCTCTCGATATAAAAATGTAATTCAAAA
TGACTGCAAAAAACAGAAATTTCTAAACTTAGTTCCGTAATTTATTCATG
GACGTCGGCTGAATCTGCTAAAGCGTTAAAGCAATGAAGAAGTAGACCCC
GGTTGAAAAGCACCAGTTGGTTCTTGCGGAATCATTGTCTCACATTGATC
AAGTTTCTTATGACATATTGCAGTATGCCTCCATGATCAAAGTAAGCCAA
TTCCACCTCTGTATCAAATCTTATAACGCATGTGAATGACTTGCCACTGT
CTGTGACCACTCTGACATCCTGACCAGGTCTAATTTCACTCACACTGTTT
GGAAGGTCAATGGTGTAGCGTTCATGGCCAGTCAACCCATGAGTCTCGGC
ATCCTCACCAGGCTTGAAACACAACGGGATTATGCCCATACCCACCAAAT
TACTACGGTGAATTCGCTCAAAGCTTTTTGCAATCACCGCTTTCACACCC
AGCAACATTGGACCCTTAGCAGCCCAATCACGAGAACTTCCACTGCCATA
CTCAGCACCAGCTAAAATAACAGTATCGTGCCCCTCATTCTTGTACCTCA
TAGCAGCATCAAACACAGAGAGTTTCTCCCCAGTAGGAATGTGAATTGTT
TTAGGCCCAACTTCTCCGTTCAACAATTTGTTTACAAGCCGAATATTGGC
AAATGTACCCCTTGCCATAATCTCATCATTACCACGACGACTTCCATAAG
AGTTGAAATCTCTTCTATCAACCCCACGTTCCATAAGATATTTGGCTGCA
GGACTATCTT
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