CB292745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB292745 vs. ExPASy Swiss-Prot
Match: CTNS_ARATH (Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 5.126e-55 Identity = 107/174 (61.49%), Postives = 129/174 (74.14%), Query Frame = -1 Query: 260 AFSMHAVLLTIITLFQIAIYERGVQKVFKISMAIVSVVWLAAAVCFLVALPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLYPAKKAVISSKLSKDGGVEPLLKSS 781 AFS+HAV++T +TLFQI IYERG QKV ++++ IV VVW AA+CF +ALP HSWLWLI+ FN+IQV MT +KYIPQA MNF RKST G+SIGNILLDF GG NY QM++QSIDQNSW NFYGN+GKT F+ QHYVLYP KK S + ++ EPL+ SS Sbjct: 94 AFSIHAVVMTAVTLFQIFIYERGPQKVSRLAIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKSTVGWSIGNILLDFTGGLANYLQMVIQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMFQHYVLYPEKKVSKSPETGEESN-EPLIDSS 266
BLAST of CB292745 vs. ExPASy Swiss-Prot
Match: CTNS_DICDI (Cystinosin homolog OS=Dictyostelium discoideum GN=ctns PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.976e-28 Identity = 61/156 (39.10%), Postives = 95/156 (60.90%), Query Frame = -1 Query: 317 AFSMHAVLLTIITLFQIAIYERGVQKVFKISMAIVSVVWLAAAVCFLVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLYPAKKA 781 AF++H +LT IT+ Q IY+RG QK K+ + I +++W++ V ++ N +WLW+IN+++ +++ +T IKYIPQA +NF+ KST G+S+ N+LLDF GG + QM + D +W F G+ K FI QHY+LY K+ Sbjct: 87 AFAIHGFVLTAITIIQCFIYDRGNQKNSKLGIGIATLIWVSLIVMTILGFSNVFTWLWVINYYSYVKLFITFIKYIPQAYLNFKNKSTSGWSVHNVLLDFSGGVLSLLQMFLDVADSGNWNIFTGDPVKLGLSLFSIAFDILFIIQHYILYRNPKS 242
BLAST of CB292745 vs. ExPASy Swiss-Prot
Match: CTNS_HUMAN (Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.101e-24 Identity = 61/150 (40.67%), Postives = 89/150 (59.33%), Query Frame = -1 Query: 332 FSMHAVLLTIITLFQIAIYERGVQKVFKISMAIVSVVWLAAAVCFLVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLY 778 FS+HAV+LT+I + Q +YERG Q+V ++ + + WL A V +VA +WL + F+ I++ +TL+KY PQA MNF KST+G+SIGN+LLDF GG + QM +QS + + W +G+ K F QH+ LY Sbjct: 208 FSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFSIVFDVVFFIQHFCLY 357
BLAST of CB292745 vs. ExPASy Swiss-Prot
Match: CTNS_BOVIN (Cystinosin OS=Bos taurus GN=CTNS PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.101e-24 Identity = 58/153 (37.91%), Postives = 90/153 (58.82%), Query Frame = -1 Query: 323 FSMHAVLLTIITLFQIAIYERGVQKVFKISMAIVSVVWLAAAVCFLVALPNHS-WLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLYPAK 778 FS+HAV LT++ + Q +YERG Q+V ++++ + + WL + ++A + WL + F+ I++ +TL+KY PQA MNF KST+G+SIGN+LLDF GG + QM +QS + + W +G+ K F QH+ LY K Sbjct: 208 FSLHAVALTLVVIVQCLLYERGSQRVSWLAISFLVLSWLFTLIALIMAAVGATTWLQFLFCFSYIKLAVTLVKYFPQAYMNFHYKSTEGWSIGNVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGIFSIIFDVVFFIQHFCLYRKK 360
BLAST of CB292745 vs. ExPASy Swiss-Prot
Match: CTNS_MOUSE (Cystinosin OS=Mus musculus GN=Ctns PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.743e-24 Identity = 63/153 (41.18%), Postives = 87/153 (56.86%), Query Frame = -1 Query: 323 FSMHAVLLTIITLFQIAIYERGVQKVFKISMAIVSVVWLAAAVCFLVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLYPAK 778 FS+HAV LT+I + Q +YERG Q+V S+ + + WL V +VA +WL + F+ I++I+TLIKY PQA MNF KST G+SIG +LLDF GG + QM +QS + + W +G+ K F QH+ LY K Sbjct: 208 FSLHAVALTLIVILQCCLYERGNQRVSWPSIGFLVLAWLFVLVTMIVAAVGITTWLQFLFCFSYIKLIITLIKYFPQAYMNFYYKSTKGWSIGGVLLDFTGGSFSLLQMFLQSYNNDQWTLIFGDPTKFGLGVFTIFFDVVFFIQHFYLYRKK 360
BLAST of CB292745 vs. ExPASy Swiss-Prot
Match: CTNS_DROME (Cystinosin homolog OS=Drosophila melanogaster GN=CG17119 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.778e-23 Identity = 65/179 (36.31%), Postives = 98/179 (54.75%), Query Frame = -1 Query: 251 FSMHAVLLTIITLFQIAIYERGVQKVFKISMAIVSVVWLAAAVCFLVALPNHS---WLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLYPAKKAVISSKLSKDGGVEPLLKSSDHP 778 FS+HA+ T IT+ Q Y+R Q+V I+ I+++ A V L S WL + + + +++ +T+IKY+PQA+MN+RRKST G+SIGNILLDF GG + QMI+ + + + WV+ +G+ K F+ QHYV Y + SS L+ V+ S P Sbjct: 213 FSLHAMFATCITILQCFFYQRAQQRVSFIAYGILAI--FAVVVVVSAGLAGGSVIHWLDFLYYCSYVKLTITIIKYVPQALMNYRRKSTSGWSIGNILLDFTGGTLSMLQMILNAHNYDDWVSIFGDPTKFGLGLFSVLFDVFFMLQHYVFYRHSRESSSSDLTTVTDVQNRTNESPPP 389
BLAST of CB292745 vs. ExPASy Swiss-Prot
Match: CTNS_CAEEL (Cystinosin homolog OS=Caenorhabditis elegans GN=ctns-1 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.099e-20 Identity = 59/152 (38.82%), Postives = 82/152 (53.95%), Query Frame = -1 Query: 329 FSMHAVLLTIITLFQIAIYERGVQKVFKISMAIVSVVWLAAAVCFLVA--LPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLYP 778 F++HA L IT+ Q YER Q V +A++ +V ++ C A L L + + I++ +T KY PQA N+ RKST G+SIGNI+LDF GG + QMI+Q+++ N W FY N K F+ QHYVLYP Sbjct: 210 FAVHAFLACFITILQCLFYERDNQSVSSKCIALM-IVLISFGFCSAAATVLRKIQLLSFVTSLSYIKMAVTCCKYFPQAYFNYTRKSTVGWSIGNIMLDFTGGTLDILQMILQAVNVNDWSAFYANPVKFGLGFVSIFFDIIFMVQHYVLYP 360
BLAST of CB292745 vs. ExPASy Swiss-Prot
Match: CTNS_CAEBR (Cystinosin homolog OS=Caenorhabditis briggsae GN=ctns-1 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.993e-20 Identity = 59/182 (32.42%), Postives = 94/182 (51.65%), Query Frame = -1 Query: 239 FSMHAVLLTIITLFQIAIYERGVQKVF-KISMAIVSVVWLAAAVCFLVALPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQNSWVNFYGNIGKTXXXXXXXXXXXXFICQHYVLYPAKKAVISSKLSKDG-GVEPLLKSSDHPESEN 778 F++HA L +T+ Q YER Q++ K + I+ +V + L + L + + I++ +T KY PQA N++RKST G+SIGNILLDF GG + QM++Q+I+ N W FY N K F+ QHY LYP + + D + +++ ++H ++N Sbjct: 209 FAVHAFLACFVTILQCIFYERDQQRISTKCIILIIGLVSFGFVSVVVTVLNKITILDFVVSLSYIKMAVTCCKYFPQAYFNYQRKSTVGWSIGNILLDFTGGSLDILQMVLQAINVNDWSAFYANPVKFGLGFVSIFFDIIFMIQHYALYPDAEVPHNEYHGVDNPDPDSIVRDAEHGAADN 390 The following BLAST results are available for this feature:
BLAST of CB292745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB292745 ID=CB292745; Name=CB292745; organism=Citrus sinensis; type=EST; length=781bpback to top |