CB292801

Overview
NameCB292801
Unique NameCB292801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length293
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB292801 vs. ExPASy Swiss-Prot
Match: VINSY_RAUSE (Vinorine synthase OS=Rauvolfia serpentina GN=ACT PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.531e-11
Identity = 40/91 (43.96%), Postives = 53/91 (58.24%), Query Frame = 1 
Query:   22 VSREVVRPSSFHVHLLKPIKISLLYQLTPTTFAPLVLFYPMK-STHLKGTQISTQLRESLAKTLQHFYALAGIVRYNLIINDYDEGVPYIE 291
            VS E++ PSS     LK  KIS L QL  T   P +LFYP    ++L   Q S  L++SL+K L HFY LAG +  N  ++  D GVP++E
Sbjct:    8 VSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVE 98
The following BLAST results are available for this feature:
BLAST of CB292801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
VINSY_RAUSE1.531e-1143.96Vinorine synthase OS=Rauvolfia serpentina GN=ACT P... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_05ac10_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05ac10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB292801 ID=CB292801; Name=CB292801; organism=Citrus sinensis; type=EST; length=293bp
CCAACATGGTAAATTGGCATTGTATCAAGAGAAGTTGTGAGGCCATCTTC
GTTCCATGTTCATCTTTTAAAACCAATCAAAATTTCTCTTTTATATCAAC
TCACTCCCACAACTTTTGCTCCACTCGTCCTCTTTTACCCCATGAAGAGT
ACACATCTAAAGGGTACCCAAATCTCAACTCAACTCAGGGAGTCACTCGC
AAAAACCCTACAACACTTTTACGCTTTGGCCGGAATAGTGAGATACAATC
TCATAATCAACGATTATGATGAGGGAGTTCCATACATTGAAAC
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