CB292819

Overview
NameCB292819
Unique NameCB292819
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB292819 vs. ExPASy Swiss-Prot
Match: USF_AQUPY (Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.269e-18
Identity = 64/204 (31.37%), Postives = 97/204 (47.55%), Query Frame = 1
Query:  115 IQIQRDDTTFDAYVVG-KEDAPGIVVVQEWWGVDFEIENHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSG-----LDWPGAVKDIHASVNWL---RANGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAHAFMN 693
            ++ +++      Y+   K   PG++V+ EWWG++  + N      +    GF A  PD Y GK   +  +A  LM+      +D   A+    ASV++L   R    KKVGVTG+C GG L++  +   P+ +DA V FYG+P     D    K P+     E D FV   +V            +GV  +V +Y G  HAF+N
Sbjct:    5 VEFEKNGVKVRGYIATPKWGGPGVIVIHEWWGLESPLSNIKEICDRFAQEGFVAFAPDFYEGKYADNPDDAGKLMTDMFENRMDKVDAI--FKASVDFLKECRYTSPKKVGVTGFCCGGTLSMYFAGKFPDLIDASVPFYGLPQITKIDAENIKVPIFFILAEKDEFVNNDEV---IDIAKKVWKNGVDVKVKVYSGVTHAFLN 203          
BLAST of CB292819 vs. ExPASy Swiss-Prot
Match: DLHH_AQUAE (Putative carboxymethylenebutenolidase OS=Aquifex aeolicus GN=aq_1997 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.901e-16
Identity = 59/202 (29.21%), Postives = 96/202 (47.52%), Query Frame = 1
Query:  115 IQIQRDDTTFDAYVVGKEDA-PGIVVVQEWWGVDFEIENHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSGL---DWPGAVKDIHASVNWL---RANGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAHAFMN 693
            ++ +++      Y+   + A P ++V  EWWG++  + N      +L + GF A  PD Y+G+   +  +A  LM+ +         +   ASV ++   R    KKVG+TG+C GG LA+  +   PE VDA + FYG+P     +    K P+     E D FV   +V            +GV  +V ++ G  HAF+N
Sbjct:    5 VEFEKNGVKVRGYIATPKWAGPAVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPDFYKGQYADNPDDAGKLMTEMFEKRMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFPEMVDASLPFYGLPQLTQINAENIKVPIFFILAEKDEFVNNDEV---IDIAKTVWKNGVDVQVKVFSGVTHAFLN 203          
BLAST of CB292819 vs. ExPASy Swiss-Prot
Match: YGHX_ECOLI (Putative uncharacterized protein yghX OS=Escherichia coli (strain K12) GN=yghX PE=5 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 55/179 (30.73%), Postives = 89/179 (49.72%), Query Frame = 1
Query:  175 PGIVVVQEWWGVDFEIENHAVKISQLNPGFKALIPDLYRGKVGL--DTAEAQHLMSGLDWPGAVKDIHASVNWLRA--NGSKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTXXXXXXXXXXSGVPYEVHIYPGSAHAFMNIS 699
            P +VVV E  G++  IE+ A ++++   G+ AL PD      G   +  + + L   +D    + D  A++ +++     + KVG+TG+C GG ++ A++V  PE+   V FYG   P  AD  + +AP+  HF ELD  +     +           +   YE +IYPG  H F N S
Sbjct:   82 PAVVVVHENRGLNPYIEDVARRVAKA--GYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAP-TADVAKIEAPLLLHFAELDTRIN----EGWPAYEAALKANNKVYEAYIYPGVNHGFHNDS 253          
The following BLAST results are available for this feature:
BLAST of CB292819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
USF_AQUPY3.269e-1831.37Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1[more]
DLHH_AQUAE8.901e-1629.21Putative carboxymethylenebutenolidase OS=Aquifex a... [more]
YGHX_ECOLI1.088e-1330.73Putative uncharacterized protein yghX OS=Escherich... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_05ad09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05ad09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB292819 ID=CB292819; Name=CB292819; organism=Citrus sinensis; type=EST; length=711bp
GCCCCTTGATCGACTCCGCTTCTTAAGCCCTCTCTCGCAAGGACTCACTT
TCCCGCCGGTTATCGCTTTGCAGTCAGATCAATGGCAGACTCTGCAGCTT
CGCCCTTCAAGAAAATCCAGATTCAGAGAGATGATACTACTTTTGATGCA
TATGTGGTTGGCAAAGAAGACGCCCCTGGGATTGTTGTAGTTCAGGAGTG
GTGGGGTGTTGATTTTGAGATCGAGAACCATGCTGTCAAAATCTCCCAAC
TAAACCCTGGATTCAAGGCACTTATACCAGATTTATATCGGGGAAAGGTT
GGTTTGGATACTGCTGAAGCACAGCACTTGATGAGTGGTCTTGATTGGCC
AGGTGCTGTCAAGGATATCCACGCTTCGGTTAATTGGCTTAGGGCAAATG
GTTCCAAGAAGGTTGGCGTGACTGGATATTGCATGGGAGGTGCTCTCGCT
ATTGCAAGTTCTGTCTTAGTTCCTGAGGTTGATGCTGTTGTTTCATTTTA
TGGGGTTCCCCCACCTGAGCTCGCCGATCCTACCCAGGCTAAGGCACCTG
TTCAAGCTCATTTTGGGGAGCTTGACAATTTTGTTGGCTTTTCAGATGTG
AAAACTGCCAAAGCATTGGAGGAAAAGCTGAAAGCATCTGGTGTTCCATA
TGAGGTACATATTTATCCTGGCAGTGCACATGCTTTCATGAACATTTCTC
CGGATGGAGTG
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