CB292835

Overview
NameCB292835
Unique NameCB292835
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB292835 vs. ExPASy Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.762e-31
Identity = 63/95 (66.32%), Postives = 74/95 (77.89%), Query Frame = 1
Query:   94 AEVTNPGENYNKWSGKNRFLVNDTLFFKYKKGSHSVLLVNKDDYYSCNTKKPLLKLDSGDSHFKLDRSGPFYFISGNHDHCQKGQKLIVIVLHER 378
            A VTNP ENY  WSGKNRFLV+DTL+F Y KG+ SVL VNK DY +CNTK P+ ++D GDS   LDR GPFYFISGN D+C+KGQKL V+V+  R
Sbjct:   38 AWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISAR 132          
BLAST of CB292835 vs. ExPASy Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 9.070e-20
Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = 1
Query:  118 NYNKWSGKNRFLVNDTLFFKYKKGSHSVLLVNKDDYYSCNTKKPLLKLDSGDSHFKLDRSGPFYFISGNHDHCQKGQKLIVIVLHER 378
            ++ +W+ K RF V D + F+Y+ G  SVL V K+ Y SCNT  PL     G++  KLDRSGPFYFISG + HC+KGQKL ++V+  R
Sbjct:   49 SFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVISPR 135          
BLAST of CB292835 vs. ExPASy Swiss-Prot
Match: ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.003e-18
Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 1
Query:  103 TNPGENYNKWSGKNRFLVNDTLFFKYKKGSHSVLLVNKDDYYSCNTKKPLLKLDSGDSHFKLDRSGPFYFISGNHDHCQKGQKLIVIVLHER 378
            ++P E+ NKW+   RF V DTL +KY +   SVL V KD Y +CNT  P     +GD+  KL+RSGP++FISG+  +C +G+KL ++V+  R
Sbjct:   39 SSPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMSSR 130          
BLAST of CB292835 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.222e-13
Identity = 34/83 (40.96%), Postives = 47/83 (56.63%), Query Frame = 1
Query:  118 NYNKWSGKNRFLVNDTLFFKYKKGSHSVLLVNKDDYYSCNTKKPLLKLDSGDSHFKLDRSGPFYFISGNHDHCQKGQKLIVIV 366
            +Y KW+  N+F V D+L F Y    H+VL V+++ + SCN+  P     SG     L R G FYF+ G   HCQ GQK+ + V
Sbjct:   19 DYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101          
BLAST of CB292835 vs. ExPASy Swiss-Prot
Match: NO552_SOYBN (Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.645e-11
Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 1
Query:  115 ENYNKWSGKNRFLVNDTLFFKYKKGSHSVLLVNKDDYYSCNT-KKPLLKLDSGDSHFKLDRSGPFYFISGNHDHCQKGQKLIVIVL 369
            ++ + W+  +RF + DTL FKY+K + SV   N+ DY  CNT  K  +  + G++   L + G  +FISGN  HCQ G KL V+V+
Sbjct:   46 DSLSHWANSHRFKIGDTLIFKYEKRTESVHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLVI 131          
The following BLAST results are available for this feature:
BLAST of CB292835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ENL2_ARATH1.762e-3166.32Early nodulin-like protein 2 OS=Arabidopsis thalia... [more]
ENL1_ARATH9.070e-2050.57Early nodulin-like protein 1 OS=Arabidopsis thalia... [more]
ENL3_ARATH1.003e-1845.65Early nodulin-like protein 3 OS=Arabidopsis thalia... [more]
MAVI_CUCPE8.222e-1340.96Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
NO552_SOYBN2.645e-1140.70Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_05ae07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05ae07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB292835 ID=CB292835; Name=CB292835; organism=Citrus sinensis; type=EST; length=778bp
GCACGTTGAAATCTCTTTGCCTTTCCTTGGCTCTCTTTGCATCTTTCATC
TCTTCCTCTCACGCACTCAAATTCAACGAGGGTGGCAAACACCGCTGAGG
TTACAAACCCTGGAGAAAATTACAACAAATGGTCTGGGAAAAACAGGTTC
CTCGTCAATGATACCCTCTTTTTCAAGTACAAAAAAGGATCACACTCCGT
GTTGTTAGTGAACAAAGATGATTACTACAGCTGCAACACCAAAAAGCCTT
TGCTGAAACTGGATTCGGGTGACTCACACTTCAAGCTTGATCGTTCGGGT
CCTTTCTATTTCATAAGTGGAAACCATGATCATTGCCAAAAGGGACAGAA
ATTAATCGTCATCGTTTTGCATGAAAGGCCTCCCCCTCCCTCAACTGGAC
CCCCCACCACGAAACCTCCACCGCATGCCCCGTCTCCTAAGACTCCTTCT
CCGGCCACACAGCCGCCGGCGACTTCCCCCTCCACCTCACCAACATCTCA
TGCACCTTCGGCTAATCCTCCTAAAGGGTCCTCTCCGACGCCGGCAACTT
CACCTTCCACGTCTTCGCCTTATCCTCCAAAAGGATACTCTCCAGTGCCG
GCGACTTCACCTTCCACGTCACCATCATCTCATGCGCCTTCGCCTTATCC
TCCAAAAGGGTACTCTCCGGTGCCGGCAACTTCACCTTCTACGTCACCAT
CATCATCCCAATCACCTGCGGCTAATGCTCCAACTGGGCTGTCACCGGCT
CCTGGAACTTCCCCCTCCACGTCACCGT
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