CB293065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293065 vs. ExPASy Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.581e-37 Identity = 57/64 (89.06%), Postives = 58/64 (90.62%), Query Frame = 1 Query: 130 MARCLFEAKLLLAPGADGISLSIGRRGYAAAAPLGTISRTGIMEKNDLTPAVREDSGASSALGP 321 MAR LF+AKLLLAP ADGISLSI RRGYAAAAPLGTISRTGIMEKNDL PAVREDSGASSA P Sbjct: 1 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASSAWAP 64 HSP 2 Score: 67.781 bits (164), Expect = 3.581e-37 Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 2 Query: 314 WAPDPITGYYRPENPAGEIDPSELLEMLMNHKVRA 418 WAPDPITGYYRPEN A EIDP+EL EML+NHKVRA Sbjct: 62 WAPDPITGYYRPENRAVEIDPAELREMLLNHKVRA 96
BLAST of CB293065 vs. ExPASy Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.182e-14 Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 2 Query: 314 WAPDPITGYYRPENPAGEIDPSELLEMLMNHKVRAR 421 WAPDP+TGYYRPEN EID +EL EML+NH+VR++ Sbjct: 70 WAPDPVTGYYRPENCGAEIDAAELREMLLNHRVRSQ 105 HSP 2 Score: 38.1206 bits (87), Expect = 2.182e-14 Identity = 24/63 (38.10%), Postives = 34/63 (53.97%), Query Frame = 1 Query: 130 MARCLFEAKLLLAPGADGISLSIGRRGYAAAAP---LGTISRTGIMEKNDLTPAVREDSGASS 309 MAR + KLL A DG+ +SI RRGY+ A P + R G M K + A++E S + + Sbjct: 1 MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSSSET 63
BLAST of CB293065 vs. ExPASy Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.444e-12 Identity = 23/36 (63.89%), Postives = 31/36 (86.11%), Query Frame = 2 Query: 314 WAPDPITGYYRPENPAGEIDPSELLEMLMNHKVRAR 421 WAPDP+TGYYRPEN EID ++L EM++NH+VR++ Sbjct: 70 WAPDPVTGYYRPENCGAEIDAADLREMMLNHRVRSQ 105 HSP 2 Score: 33.8834 bits (76), Expect = 1.444e-12 Identity = 22/63 (34.92%), Postives = 32/63 (50.79%), Query Frame = 1 Query: 130 MARCLFEAKLLLAPGADGISLSIGRRGYAAAAP---LGTISRTGIMEKNDLTPAVREDSGASS 309 MAR + K L A D + +SI RRGY+ A P + R G M K + A++E S + + Sbjct: 1 MARSVSSFKFLGASVFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSSSET 63 The following BLAST results are available for this feature:
BLAST of CB293065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293065 ID=CB293065; Name=CB293065; organism=Citrus sinensis; type=EST; length=609bpback to top |