CB293119
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293119 vs. ExPASy Swiss-Prot
Match: YD68_SCHPO (UPF0016 membrane protein C17G8.08c OS=Schizosaccharomyces pombe GN=SPAC17G8.08c PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.657e-19 Identity = 45/106 (42.45%), Postives = 65/106 (61.32%), Query Frame = -1 Query: 462 TKEGSKADDELKKQRRPFLSQFFFPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVFGGIIGQALCTTAAVIGGKSLGFQIFEKIVALSGGVFFIVFGIQSF 779 ++ G +LK + R ++ F P+F+KAF++TF EWGD+SQ+ATI +AA +N +GV G +G A CT AVI GK + +I V GG+ FI FG+ F Sbjct: 177 SRSGHTLMSQLKSKGRNVMATLFSPLFIKAFALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYISTKIKVHKVMFIGGILFIAFGLVYF 282
BLAST of CB293119 vs. ExPASy Swiss-Prot
Match: TM165_RAT (Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.149e-18 Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = -1 Query: 453 FFFPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVFGGIIGQALCTTAAVIGGKSLGFQIFEKIVALSGGVFFIVFGIQS-FLSP 716 F PIF++A ++TF EWGD+SQL TI LAA E+P+GV GG +G LCT AVIGG+ + +I + V + GG+ F+ F + F+SP Sbjct: 231 FISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 319
BLAST of CB293119 vs. ExPASy Swiss-Prot
Match: TM165_MOUSE (Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 5.149e-18 Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = -1 Query: 453 FFFPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVFGGIIGQALCTTAAVIGGKSLGFQIFEKIVALSGGVFFIVFGIQS-FLSP 716 F PIF++A ++TF EWGD+SQL TI LAA E+P+GV GG +G LCT AVIGG+ + +I + V + GG+ F+ F + F+SP Sbjct: 231 FISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 319
BLAST of CB293119 vs. ExPASy Swiss-Prot
Match: TM165_HUMAN (Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.149e-18 Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = -1 Query: 453 FFFPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVFGGIIGQALCTTAAVIGGKSLGFQIFEKIVALSGGVFFIVFGIQS-FLSP 716 F PIF++A ++TF EWGD+SQL TI LAA E+P+GV GG +G LCT AVIGG+ + +I + V + GG+ F+ F + F+SP Sbjct: 232 FISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFSALFISP 320
BLAST of CB293119 vs. ExPASy Swiss-Prot
Match: Y615_SYNY3 (UPF0016 membrane protein sll0615 OS=Synechocystis sp. (strain PCC 6803) GN=sll0615 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.329e-15 Identity = 37/85 (43.53%), Postives = 57/85 (67.06%), Query Frame = -1 Query: 450 IFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVFGGIIGQALCTTAAVIGGKSLGFQIFEKIVALSGGVFFIVFGIQSFLSPV 704 I +++F++TF EWGD++Q+ATI LAA N +GV G I+G +C AV+GGK + +I EK V L GG+ F +F + S+ + + Sbjct: 121 IVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGGKFVAGRISEKTVTLIGGLLFYLFAVVSWWTKI 205
BLAST of CB293119 vs. ExPASy Swiss-Prot
Match: YB37_YEAST (UPF0016 membrane protein YBR187W OS=Saccharomyces cerevisiae GN=YBR187W PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.095e-11 Identity = 31/88 (35.23%), Postives = 54/88 (61.36%), Query Frame = -1 Query: 471 RPFLSQFFFPIFLKAFSITFFGEWGDKSQLATIGLAADENPFGVVFGGIIGQALCTTAAVIGGKSLGFQIFEKIVALSGGVFFIVFGI 734 R S F P++++ F + F GE GD+SQ++ I +A D + + V+ G +IG A+C+ AV+GGK L +I + + L+ + F +F + Sbjct: 182 RELASFMFSPVWVQIFLMVFLGELGDRSQISIIAMATDSDYWYVIAGAVIGHAICSGLAVVGGKLLATRISIRTITLASSLLFFIFAL 269 The following BLAST results are available for this feature:
BLAST of CB293119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293119 ID=CB293119; Name=CB293119; organism=Citrus sinensis; type=EST; length=794bpback to top |