CB293143

Overview
NameCB293143
Unique NameCB293143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293143 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.165e-36
Identity = 84/150 (56.00%), Postives = 101/150 (67.33%), Query Frame = -3
Query:  363 IPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGLLSGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEEVGEVAXXXXXXXXRSLMVDE-------VSPA-QVVADNFTEIAYGRNSFDNISIIVVDLKA 788
            +PL+VD KPDR+DE  RIE AGG+VI W GARVFGVLAMSR+IG    DRYL+P +IP PE+TF  R+ EDECLILASDGLWDVM N+EV E+A        +             + PA Q  AD  + +A  + S DNISIIV+DLKA
Sbjct:  358 MPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIG----DRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKA 503          
BLAST of CB293143 vs. ExPASy Swiss-Prot
Match: P2C06_ORYSJ (Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.526e-35
Identity = 81/152 (53.29%), Postives = 101/152 (66.45%), Query Frame = -3
Query:  363 IPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGLLSGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEEVGEVAXXXXXXXXRSLMVDEVS----------PAQVVADNFTEIAYGRNSFDNISIIVVDLKA 788
            +PL+VD KP+R+DE  RIE  GG+VI WNG RVFGVLAMSR+IG    DRYL+P IIPVPEIT   R  +DECL+LASDGLWDVM+NEEV +VA        +    +  S           A+  A+  +++A  + S DNIS+IVVDLKA
Sbjct:  312 VPLSVDHKPNREDEYARIEAEGGKVIQWNGYRVFGVLAMSRSIG----DRYLKPWIIPVPEITIVPRAKDDECLVLASDGLWDVMSNEEVCDVARKRILLWHKKNGTNPASAPRSGDSSDPAAEAAAECLSKLALQKGSKDNISVIVVDLKA 459          
BLAST of CB293143 vs. ExPASy Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 4.605e-35
Identity = 84/155 (54.19%), Postives = 103/155 (66.45%), Query Frame = -3
Query:  366 IPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGLLSGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEEVGEVA--------XXXXXXXXRSLMVDE-----VSPAQV-VADNFTEIAYGRNSFDNISIIVVDLK 788
            +PL+VD KPDR+DE  RIE AGG+VI WNGARVFGVLAMSR+I    GDRYL+P IIP PE+T   R  ED+CLILASDG+WDVMT+EE  E+A                 SL+ DE       PA +  A+  +++A  R S DNIS++VVDLK
Sbjct:  273 LPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSI----GDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLK 423          
BLAST of CB293143 vs. ExPASy Swiss-Prot
Match: P2C37_ARATH (Protein phosphatase 2C 37 OS=Arabidopsis thaliana GN=PP2CA PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.481e-33
Identity = 81/142 (57.04%), Postives = 94/142 (66.20%), Query Frame = -3
Query:  366 IPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGLLSGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEEVGEVAXXXXXXXXRSLMVDEVSPA-QVVADNFTEIAYGRNSFDNISIIVVDLK 788
            IPL+VD KPDR DEL RI+ AGGRVI W+GARV GVLAMSRAIG    D YL+P +IP PE+T T RTDEDECLILASDGLWDV+ NE    VA             D    A    A   T++A  R S DN+S++VVDL+
Sbjct:  253 IPLSVDHKPDRPDELIRIQQAGGRVIYWDGARVLGVLAMSRAIG----DNYLKPYVIPDPEVTVTDRTDEDECLILASDGLWDVVPNETACGVARMCLRGAGAGDDSDAAHNACSDAALLLTKLALARQSSDNVSVVVVDLR 390          
BLAST of CB293143 vs. ExPASy Swiss-Prot
Match: P2C77_ARATH (Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.935e-33
Identity = 79/154 (51.30%), Postives = 101/154 (65.58%), Query Frame = -3
Query:  366 IPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGLLSGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEEVGEVA--XXXXXXXXRSLMVDEVSPAQ-----------VVADNFTEIAYGRNSFDNISIIVVDLK 788
            + L+VD KPDR DE  RIE AGG+VI WNGARVFGVLAMSR+IG    DRYL+P +IP PE+T   R  ED+CLILASDGLWDVMTNEEV ++A           ++  + + PA+             A+  +++A  + S DNIS++VVDLK
Sbjct:  263 LALSVDHKPDRDDEAARIEAAGGKVIRWNGARVFGVLAMSRSIG----DRYLKPSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKMALQKGSKDNISVVVVDLK 412          
BLAST of CB293143 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.310e-33
Identity = 76/154 (49.35%), Postives = 99/154 (64.29%), Query Frame = -3
Query:  363 IPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGLLSGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEEVGEVA-----------XXXXXXXXRSLMVDEVSP-AQVVADNFTEIAYGRNSFDNISIIVVDLKA 788
            +PL++D KP+R+DE  RIE  GG+VI WNG RV GVLAMSR+IG    D+YL+P IIPVPE+T   R  +D+CLILASDGLWDVM+NEEV + A                     +  D   P AQ  AD  +++A  + S DNI+++V+DLKA
Sbjct:  288 LPLSLDHKPNREDEYARIEALGGKVIQWNGYRVLGVLAMSRSIG----DKYLKPYIIPVPEVTVVARAKDDDCLILASDGLWDVMSNEEVCDAARKRILLWHKKNAATASTSSAQISGDSSDPAAQAAADYLSKLALQKGSKDNITVVVIDLKA 437          
BLAST of CB293143 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 5.629e-33
Identity = 79/151 (52.32%), Postives = 96/151 (63.58%), Query Frame = -3
Query:  363 TIPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGLLSGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEEVGEVA--------XXXXXXXXRSLMVDEVSPAQVVADNFTEIAYGRNSFDNISIIVVDLKA 791
            ++PL+VD KPDR+DE  RIE AGG+VI W GARV GVLAMSR+IG    D+YL P +IP PE+TF  R  EDECLILASDGLWDVM+N+E  + A                    V E    Q  A+  +++A    S DNISIIV+DLKA
Sbjct:  357 SMPLSVDHKPDREDEYARIEKAGGKVIQWQGARVSGVLAMSRSIG----DQYLEPFVIPDPEVTFMPRAREDECLILASDGLWDVMSNQEACDFARRRILAWHKKNGALPLAERGVGEDQACQAAAEYLSKLAIQMGSKDNISIIVIDLKA 503          
BLAST of CB293143 vs. ExPASy Swiss-Prot
Match: P2C68_ORYSJ (Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.386e-31
Identity = 76/141 (53.90%), Postives = 92/141 (65.25%), Query Frame = -3
Query:  366 IPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGLLSGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEEVGEVAXXXXXXXXRSLMVDEVSPAQVVADNFTEIAYGRNSFDNISIIVVDLK 788
            + L+ D KPDR DELERIE AGGRVI W GARV GVLAMSR+I    GD YL+P +  VPE+T T R+D DECLILASDGLWDV++NE   EVA        +    +        A   T++A  R S DNIS++VVDL+
Sbjct:  224 VQLSSDHKPDRPDELERIEAAGGRVIFWEGARVLGVLAMSRSI----GDAYLKPYVTAVPEVTVTGRSDFDECLILASDGLWDVVSNEAACEVAQSCLRRGRQRWCAE-------AAAVLTKLALARRSSDNISVVVVDLR 353          
BLAST of CB293143 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.365e-31
Identity = 74/143 (51.75%), Postives = 93/143 (65.03%), Query Frame = -3
Query:  366 IPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGLLSGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEEVGEVAXXXXXXXXRSLMVDEV--SPAQVVADNFTEIAYGRNSFDNISIIVVDLK 788
            +PL+ D KPDR DELER+E AGGRVINWNG RV GVLA SR+I    GD YL+P +   PE+    RTD+DE LILASDGLWDV++NE   ++A         S+  + V  S A   A    E+A  R S DNIS++VV+L+
Sbjct:  236 LPLSTDHKPDRPDELERVEAAGGRVINWNGYRVLGVLATSRSI----GDYYLKPFVSAEPEVRVVERTDKDEFLILASDGLWDVVSNEVACKIARNCLNGRAASMFPESVSGSSAADAAALLAELAVSRGSRDNISVVVVELR 374          
BLAST of CB293143 vs. ExPASy Swiss-Prot
Match: P2C08_ORYSJ (Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.089e-31
Identity = 73/143 (51.05%), Postives = 94/143 (65.73%), Query Frame = -3
Query:  366 IPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGLLSGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEEVGEVAXXXXXXXXRSLMVDEV--SPAQVVADNFTEIAYGRNSFDNISIIVVDLK 788
            +PL+ D KPDR DE+ER+E AGGRVINWNG R+ GVLA SR+I    GD YL+P +I  PE+T   RTD+DE LILASDGLWDV++N+   ++A         S   + V  S A   A    E+A  R S DNIS++VV+L+
Sbjct:  251 VPLSSDHKPDRPDEMERVEAAGGRVINWNGYRILGVLATSRSI----GDYYLKPYVIAEPEVTVMDRTDKDEFLILASDGLWDVVSNDVACKIARNCLSGRAASKYPESVSGSTAADAAALLVELAISRGSKDNISVVVVELR 389          
The following BLAST results are available for this feature:
BLAST of CB293143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
P2C16_ARATH4.165e-3656.00Protein phosphatase 2C 16 OS=Arabidopsis thaliana ... [more]
P2C06_ORYSJ3.526e-3553.29Probable protein phosphatase 2C 6 OS=Oryza sativa ... [more]
P2C56_ARATH4.605e-3554.19Protein phosphatase 2C 56 OS=Arabidopsis thaliana ... [more]
P2C37_ARATH1.481e-3357.04Protein phosphatase 2C 37 OS=Arabidopsis thaliana ... [more]
P2C77_ARATH1.935e-3351.30Protein phosphatase 2C 77 OS=Arabidopsis thaliana ... [more]
P2C53_ORYSJ4.310e-3349.35Probable protein phosphatase 2C 53 OS=Oryza sativa... [more]
P2C07_ARATH5.629e-3352.32Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
P2C68_ORYSJ1.386e-3153.90Probable protein phosphatase 2C 68 OS=Oryza sativa... [more]
P2C51_ORYSJ2.365e-3151.75Probable protein phosphatase 2C 51 OS=Oryza sativa... [more]
P2C08_ORYSJ3.089e-3151.05Probable protein phosphatase 2C 8 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05ce11_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05ce11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293143 ID=CB293143; Name=CB293143; organism=Citrus sinensis; type=EST; length=793bp
TTTTTTTTTTTTTTTTTCATTAATTCTTTTTAAATTCTTCCCCAAACCAG
TAAAAATTGAGGATTGATCTAGTACTTTGCCGTAACAAAACCTATTTTGG
TGTTACAAGCAACAGTTACTTGCCGGTCAGCTCTGTACACGTTGAGGTCA
ACATTGGTAGCTAAACGAGTCTCCTTGTTGAGTGATCATCAATAAGGGAT
TTGCTCATTCCCGGAACTTCTTGAACATCACTAAATCATCAATCCTGCTG
CCAGCCTGATCTCTAAACTTCAATTAAATGGCTGAAAGTGATTTGGATTT
CTGGGGAAAATGGTTTCATCGTCACTCCCTTTTCACTGCTGCCTTTGCTG
GCGCTTCTTTTTCGCTTTCAAATCGACAACAATGATTGAAATGTTATCAA
AACTGTTTCTGCCATATGCTATTTCTGTGAAATTATCAGCCACAACTTGT
GCTGGCGAAACCTCATCAACCATCAGGGACCTGCGTCGCCTTCTTAGCAA
GCGGCGAGCTACCTCACCAACCTCTTCATTCGTCATGACATCCCAAAGTC
CATCACTTGCCAAAATCAAACACTCATCCTCATCGGTCCTTGTCGTGAAA
GTAATCTCAGGCACTGGAATTATACAAGGCCTTAAATACCGATCCCCTGA
AAGAAGCCCTATAGCTCTGGACATGGCAAGAACTCCGAAAACCCTAGCAC
CATTCCAATTTATGACTCTCCCTCCAGCTCCTTCGATTCTCTCGAGTTCG
TCCTGTCTATCAGGCTTCTGATCAACAGTCAATGGGATTGTTT
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