CB293203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293203 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 2.522e-56 Identity = 114/230 (49.57%), Postives = 139/230 (60.43%), Query Frame = 2 Query: 56 LNTTEPIRRTALNRVFAVVYTCAIFALLYHRVETLTIRSINPXXXXXXXXXXXXXXILALMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVFICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTXXXXXXXXXXXXHWLPFCRKFNLMERNPRAYFXXXXXXXXHACCSEIKMMYESMKVKVEHVVESGKVGDENITGDRGREAFSKWTDDFT 745 L+T P RRT R++AV +TC I AL+YH V +L + +LA MWATT + R +P+ R E+P P +FP LDVFICTADPYKEPP+ VVNTALSVMAY+YP++K+SVYVSDDGGS+LT HWLPFC+K N+ +R+P YF IKMMYE MK +VEHVVESGKV IT D+ R F WTD FT Sbjct: 33 LHTCHPCRRTIPYRIYAVFHTCGIIALMYHHVHSL----LTANTTLITSLLLLSDIVLAFMWATTTSLRYKPVRRTEYPEKY--AAEPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKKNNVQDRSPEVYFSSKLRSRSDE-AENIKMMYEDMKSRVEHVVESGKVETAFITCDQFRGVFDLWTDKFT 255
BLAST of CB293203 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 7.339e-56 Identity = 114/233 (48.93%), Postives = 141/233 (60.52%), Query Frame = 2 Query: 56 LNTTEPIRRTALNRVFAVVYTCAIFALLYHRVETLTIRSINPXXXXXXXXXXXXXXILALMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVFICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTXXXXXXXXXXXXHWLPFCRKFNLMERNPRAYFXXXXXXXXHACCSE---IKMMYESMKVKVEHVVESGKVGDENITGDRGREAFSKWTDDFT 745 L+T P RRT R++AV +TC I AL+YH V ++ +N +LA MWATT + R+ PIHR E+P +P +FP LDVFICTADPYKEPP+ VVNTALSVMAY+YP+ K+SVYVSDDGGS+LT HWLPFC+ N+ +R+P YF H+ E +KMMYE MK +VEHVVESGKV I D+ F WTD FT Sbjct: 11 LHTCHPCRRTIPYRIYAVFHTCGIIALMYHHVHSI----VNANNTLITCLLLLSDIVLAFMWATTTSLRLNPIHRTEYPEKY--AAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSHKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNNNVQDRSPEVYF----SSKSHSSSDEAENLKMMYEDMKSRVEHVVESGKVETAFIACDQFSCVFDLWTDKFT 233
BLAST of CB293203 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.135e-55 Identity = 111/230 (48.26%), Postives = 139/230 (60.43%), Query Frame = 2 Query: 56 LNTTEPIRRTALNRVFAVVYTCAIFALLYHRVETLTIRSINPXXXXXXXXXXXXXXILALMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVFICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTXXXXXXXXXXXXHWLPFCRKFNLMERNPRAYFXXXXXXXXHACCSEIKMMYESMKVKVEHVVESGKVGDENITGDRGREAFSKWTDDFT 745 L+T P RRT R++A+ +TC I AL+YH V +L + +LA MWATT + R+ P+HR E P +P +FP LDVFICTADPYKEPP+ VVNTALSVMAY+YP++K+SVYVSDDGGS+LT WLPFC+K N+ +R+P YF +KMMYE MK +VEHVVESGKV IT D+ R F WTD F+ Sbjct: 14 LHTCHPCRRTIPYRIYAIFHTCGIIALMYHHVHSL----VTANNTLITCLLLLSDIVLAFMWATTTSLRLNPVHRTECPEKY--AAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTFFALIEAAKFSKQWLPFCKKNNVQDRSPEVYFSSESHSRSDE-AENLKMMYEDMKSRVEHVVESGKVETAFITCDQFRGVFDLWTDKFS 236
BLAST of CB293203 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.000e-33 Identity = 84/235 (35.74%), Postives = 118/235 (50.21%), Query Frame = 2 Query: 56 LNTTEPIRRTALNRVFAVVYTCAIFALLYHRVETLTIRSINPXXXXXXXXXXXXXXILALMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVFICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTXXXXXXXXXXXXHWLPFCRKFNLMERNPRAYFXXXXXXXXHACCSE-----IKMMYESMKVKVEHVVESGKVGDENITGDRGREAFSKWTDDFT 745 L TE + A+ R+ A I +LY+R + A+ W TQ+ R P+ RR F L + + P +DVF+CTADP+ EPP V++T LSVMAY+YP+EK+SVY+SDDGGS LT WLPFCR++N+ R+P AYF H CS IK +YE M+ +++ V SGK+ +E +G F +W + T Sbjct: 11 LFATEKVGGRAVYRLQAATVAAGILLVLYYRATRVPAAGEGRAAWLGMAAAELW---FAVYWVITQSVRWCPVRRRTFKNRLAERYK-ENLPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASMFAKKWLPFCRRYNIEPRSPAAYF--SESEGHHNLCSPKEWSFIKNLYEEMRERIDSAVMSGKIPEEIKLKHKG---FDEWNSEMT 236
BLAST of CB293203 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 3.919e-33 Identity = 84/235 (35.74%), Postives = 117/235 (49.79%), Query Frame = 2 Query: 56 LNTTEPIRRTALNRVFAVVYTCAIFALLYHRVETLTIRSINPXXXXXXXXXXXXXXILALMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVFICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTXXXXXXXXXXXXHWLPFCRKFNLMERNPRAYFXXXXXXXXHACC-----SEIKMMYESMKVKVEHVVESGKVGDENITGDRGREAFSKWTDDFT 745 L TTE + A+ RV A I +LY+R + A+ W Q+ R RP RR F L + + P +D+F+CTADP EPP V++T LSVMAY+YP+EK+SVY+SDDGGS LT WLPFC+++N+ R+P AYF H C + IK +YE M+ +++ SGK+ +E +G F +W DFT Sbjct: 16 LFTTEELGGRAVYRVQAATVAAGILLVLYYRATRVPAAGEGRAAWLGMAAAELW---FAVYWVIAQSVRWRPFRRRTFRDRLAERYE-QNLPGVDIFVCTADPQSEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASIFAKKWLPFCKRYNIEPRSPAAYF--SESKVHHNLCIPKEWALIKNLYEEMRERIDTATMSGKIPEEMKLKHKG---FDEWNSDFT 241
BLAST of CB293203 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.067e-30 Identity = 68/172 (39.53%), Postives = 97/172 (56.40%), Query Frame = 2 Query: 239 WATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVFICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTXXXXXXXXXXXXHWLPFCRKFNLMERNPRAYFXXXXXXXXHACCSE---IKMMYESMKVKVEHVVESGKVGDENITGDRGREAFSKWTDDFT 745 W T + R P++RR F L + E P++D+F+CTADP EPP+ V++T LSVMAYDY EKL++Y+SDD GS LT HW+PFC+K+ + R+P AYF E +K +Y+ M +V VV SG++ + RG FS+W ++FT Sbjct: 82 WVLTLSVRWCPVYRRTFKDRLAQSYSEDELPSVDIFVCTADPTAEPPMLVISTVLSVMAYDYLPEKLNIYLSDDAGSVLTFYVLCEASEFAKHWIPFCKKYKVEPRSPAAYFAKVASPPDGCGPKEWFTMKELYKDMTDRVNSVVNSGRIPEVPRCHSRG---FSQWNENFT 250
BLAST of CB293203 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.957e-28 Identity = 69/171 (40.35%), Postives = 90/171 (52.63%), Query Frame = 2 Query: 233 LMWATTQAFRMRPIHRREFPGNLQKVVRPREFPALDVFICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTXXXXXXXXXXXXHWLPFCRKFNLMERNPRAYFXXXXXXXXHACCSEIKMMYESMKVKVEHVVESGKVGDENITGDRGREAFSKWTDDFT 745 L W TQ+ R P+ R F L + + P LDVF+CTADP EPPL VVNT LSV A DYP EKL+VY+SDDGGS LT W+PFC+KFN+ +P AY A E+ +Y M ++E G++ +E + + FS+W D T Sbjct: 78 LYWVVTQSSRWNPVWRFPFSDRLSRRYGS-DLPRLDVFVCTADPVIEPPLLVVNTVLSVTALDYPPEKLAVYLSDDGGSELTFYALTEAAEFAKTWVPFCKKFNVEPTSPAAYLSSKANCLDSA-AEEVAKLYREMAARIETAARLGRIPEE--ARVKYGDGFSQWDADAT 244
BLAST of CB293203 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.112e-22 Identity = 59/163 (36.20%), Postives = 82/163 (50.31%), Query Frame = 2 Query: 230 ALMWATTQAFRMRPIHRREFPG---------NLQKVVRPREFPALDVFICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTXXXXXXXXXXXXHWLPFCRKFNLMERNPRAYFXXXXXXXXHACCSE-------IKMMYESMKVKVEHVVES 670 AL W Q ++ P++R G NL+ + P +DVF+ TADP KEPPL NT LS++A DYP EKL+ Y+SDDGG+ LT W+PFCRK N+ RNP AYF + + +K Y+ KV++ + E+ Sbjct: 358 ALSWLLDQLPKLCPVNRLTDLGVLKERFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAQTASFASTWVPFCRKHNIEPRNPEAYFGQKRNFLKNKVRLDFVRERRRVKREYDEFKVRINSLPEA 520
BLAST of CB293203 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21 Identity = 64/172 (37.21%), Postives = 85/172 (49.42%), Query Frame = 2 Query: 230 ALMWATTQAFRMRPIHRREFPGNL----QKVVRPREFPALDVFICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTXXXXXXXXXXXXHWLPFCRKFNLMERNPRAYFXXXXXXXXH----ACCSEIKMM---YESMKVKVEHVVE-SGKVGDENITGDRG 709 A+ W Q + PI R + L +K +P E +DVF+ T DP KEPPL NT LS++A DYP EK++ YVSDDG + LT W+PFC+KF++ R P YF H A E + M YE KVK+ +V S KV ++ T G Sbjct: 322 AVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSYTAEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKHKVDPAFVMERRAMKRDYEEFKVKINALVSVSQKVPEDGWTMQDG 493
BLAST of CB293203 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.017e-21 Identity = 51/123 (41.46%), Postives = 69/123 (56.10%), Query Frame = 2 Query: 323 EFPALDVFICTADPYKEPPLSVVNTALSVMAYDYPTEKLSVYVSDDGGSALTXXXXXXXXXXXXHWLPFCRKFNLMERNPRAYFXXXXXXXXHACCSE-------IKMMYESMKVKVEHVVES 670 + P LD+F+ TADP KEPPL NT LS++A DYP EKLS YVSDDGG+ LT W+PFCRK ++ RNP +YF + S+ +K Y+ KV++ + +S Sbjct: 396 DLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRSDFVKDRRRVKREYDEFKVRINSLPDS 518 The following BLAST results are available for this feature:
BLAST of CB293203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293203 ID=CB293203; Name=CB293203; organism=Citrus sinensis; type=EST; length=746bpback to top |