CB293205

Overview
NameCB293205
Unique NameCB293205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1673 contig Csv1_Contig1673:37..760. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293205 vs. ExPASy Swiss-Prot
Match: CIPKN_ARATH (CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.780e-15
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 2
Query:  575 SRTGGASRTRVGKYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKV 724
            S +GG  RTRVGKYELGRTLGEG+FAKVKFARN E G+NVAIK++DKEKV
Sbjct:   20 SSSGG--RTRVGKYELGRTLGEGTFAKVKFARNVENGDNVAIKVIDKEKV 67          
BLAST of CB293205 vs. ExPASy Swiss-Prot
Match: CIPKN_ORYSJ (CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica GN=CIPK23 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.264e-14
Identity = 40/50 (80.00%), Postives = 46/50 (92.00%), Query Frame = 2
Query:  575 SRTGGASRTRVGKYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKV 724
            S +GG  RTRVG+YELGRTLGEG+FAKVKFARN ++GENVAIKILDK+KV
Sbjct:    2 SVSGG--RTRVGRYELGRTLGEGTFAKVKFARNADSGENVAIKILDKDKV 49          
BLAST of CB293205 vs. ExPASy Swiss-Prot
Match: CIPK9_ARATH (CBL-interacting serine/threonine-protein kinase 9 OS=Arabidopsis thaliana GN=CIPK9 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 2
Query:  590 ASRTRVGKYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKV 724
            ASRTRVG YE+GRTLGEGSFAKVK+A+NT TG+  AIKILD+EKV
Sbjct:   11 ASRTRVGNYEMGRTLGEGSFAKVKYAKNTVTGDQAAIKILDREKV 55          
BLAST of CB293205 vs. ExPASy Swiss-Prot
Match: CIPKX_ORYSJ (CBL-interacting protein kinase 33 OS=Oryza sativa subsp. japonica GN=CIPK33 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 36/43 (83.72%), Postives = 41/43 (95.35%), Query Frame = 2
Query:  596 RTRVGKYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKV 724
            + RVGKYELGRT+GEG+FAKVKFAR+TETG+ VAIKILDKEKV
Sbjct:    7 KRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKV 49          
BLAST of CB293205 vs. ExPASy Swiss-Prot
Match: CIPKW_ORYSJ (CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 36/43 (83.72%), Postives = 41/43 (95.35%), Query Frame = 2
Query:  596 RTRVGKYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKV 724
            + RVGKYELGRT+GEG+FAKVKFAR+TETG+ VAIKILDKEKV
Sbjct:    7 KRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKV 49          
BLAST of CB293205 vs. ExPASy Swiss-Prot
Match: CIPK3_ARATH (CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 35/43 (81.40%), Postives = 41/43 (95.35%), Query Frame = 2
Query:  596 RTRVGKYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKV 724
            + RVGKYE+GRT+GEG+FAKVKFARN+ETGE VA+KILDKEKV
Sbjct:    8 KRRVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKV 50          
BLAST of CB293205 vs. ExPASy Swiss-Prot
Match: CIPKV_ORYSJ (CBL-interacting protein kinase 31 OS=Oryza sativa subsp. japonica GN=CIPK31 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 34/43 (79.07%), Postives = 39/43 (90.70%), Query Frame = 2
Query:  596 RTRVGKYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKV 724
            + RVGKYELGRT+GEG+FAKV+FA+NTE  E VAIKILDKEKV
Sbjct:   14 KRRVGKYELGRTIGEGTFAKVRFAKNTENDEPVAIKILDKEKV 56          
BLAST of CB293205 vs. ExPASy Swiss-Prot
Match: CIPK8_ORYSJ (CBL-interacting protein kinase 8 OS=Oryza sativa subsp. japonica GN=CIPK8 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.051e-12
Identity = 30/47 (63.83%), Postives = 42/47 (89.36%), Query Frame = 2
Query:  584 GGASRTRVGKYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKV 724
            GG +  RVGKYE+GRT+GEG+FAKVKFA+NTE+GE+VA+K++D+  +
Sbjct:    3 GGGALRRVGKYEVGRTIGEGTFAKVKFAQNTESGESVAMKVVDRSSI 49          
BLAST of CB293205 vs. ExPASy Swiss-Prot
Match: CIPKO_ARATH (CBL-interacting serine/threonine-protein kinase 24 OS=Arabidopsis thaliana GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.343e-11
Identity = 31/41 (75.61%), Postives = 38/41 (92.68%), Query Frame = 2
Query:  602 RVGKYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKV 724
            RVGKYE+GRT+GEG+FAKVKFARNT+TG+NVAIKI+ K  +
Sbjct:    7 RVGKYEVGRTIGEGTFAKVKFARNTDTGDNVAIKIMAKSTI 47          
BLAST of CB293205 vs. ExPASy Swiss-Prot
Match: CIPK8_ARATH (CBL-interacting serine/threonine-protein kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11
Identity = 30/41 (73.17%), Postives = 39/41 (95.12%), Query Frame = 2
Query:  602 RVGKYELGRTLGEGSFAKVKFARNTETGENVAIKILDKEKV 724
            +VGKYELGRT+GEG+FAKVKFA+NTETGE+VA+KI+D+  +
Sbjct:    5 KVGKYELGRTIGEGTFAKVKFAQNTETGESVAMKIVDRSTI 45          
The following BLAST results are available for this feature:
BLAST of CB293205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CIPKN_ARATH7.780e-1580.00CBL-interacting serine/threonine-protein kinase 23... [more]
CIPKN_ORYSJ2.264e-1480.00CBL-interacting protein kinase 23 OS=Oryza sativa ... [more]
CIPK9_ARATH1.916e-1380.00CBL-interacting serine/threonine-protein kinase 9 ... [more]
CIPKX_ORYSJ3.269e-1383.72CBL-interacting protein kinase 33 OS=Oryza sativa ... [more]
CIPKW_ORYSJ3.269e-1383.72CBL-interacting protein kinase 32 OS=Oryza sativa ... [more]
CIPK3_ARATH4.269e-1381.40CBL-interacting serine/threonine-protein kinase 3 ... [more]
CIPKV_ORYSJ4.720e-1279.07CBL-interacting protein kinase 31 OS=Oryza sativa ... [more]
CIPK8_ORYSJ8.051e-1263.83CBL-interacting protein kinase 8 OS=Oryza sativa s... [more]
CIPKO_ARATH2.343e-1175.61CBL-interacting serine/threonine-protein kinase 24... [more]
CIPK8_ARATH3.996e-1173.17CBL-interacting serine/threonine-protein kinase 8 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05ch11_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05ch11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293205 ID=CB293205; Name=CB293205; organism=Citrus sinensis; type=EST; length=726bp
GCCCTTTGACAGCTCCCAAAATTTCTTCGCAAGAATCTCCTCACTAATTC
ACGTAGATGTACGTCTCTGATTTATCTTCTCAGTGCAAGCCCCTTTATAG
ATCCGTGCGCTAATTAATTATTATGATTATTATTTCTTTATTCGACTGAA
ATTTGCGAGTAAATACATCGATTTTGCCAAAATCATAATTTACATCCTTT
CTCGGCTGATTCACTCGATTCCATGGGGTCCATGTCTGATCTGTCGGTCA
CAATCTCTCATCGATTCGTCCTGAATTGTCGAGGTTTGAGTTTTTGAATT
TTGCAGAGGATCTCCACTGATTTAGTAATTAGCGTCTGAATAATTTATAA
ATCTTTTTCTTTTTTTAAAAAAAAGAAGAAGCAAAGATGAGGGTAGAGAA
GTCGCAGGTATGGCAGCCGTGCAAAAAGAACAGGTCTTGATCGTTAGTAA
ATAATCTCCAAAGCGAGAGAGAAAAAATCGAAAATAAGAGGAGATTTTTA
AATTATATTGAGGAAGGGAAGGGAACGAAAACTGAATCTTAGGTTGAGCG
AAGATTGAAGGGAAGGACATGGCTTCTCGCACAGGCGGAGCAAGCAGGAC
ACGTGTTGGGAAGTACGAGTTAGGAAGGACGCTCGGAGAAGGAAGCTTCG
CCAAAGTGAAGTTTGCTAGAAACACTGAAACTGGAGAAAATGTCGCCATT
AAAATTCTCGATAAAGAAAAGGTTCT
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