CB293218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293218 vs. ExPASy Swiss-Prot
Match: KHSE_PROVI (Homoserine kinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=thrB PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.668e-30 Identity = 85/202 (42.08%), Postives = 112/202 (55.45%), Query Frame = -2 Query: 140 NEMFGNKLLPDELVLAGLESEAKVSGF-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAAFPAEVGMPLHIWNCTQAGALVAAVLNGDPVGLGKALSSDKIVDPNRAPLIPGMEPVKKVAVEAGAYGCTISGAGPTAVAVVDNEEKGKVIGEKMVEAFW-KEGNLKAVSMVKRLDRVGAR 739 NE+ G ELV +E E G HADN APAI+G FVLIRSY PLDL+ + PEK L LV P E T R+ P ++ + GALVA +L D +G++L D + +P RAPLIPG VK+ A+ AGA GC+I+G+GP+ A D+ E GE M +AF + +LK+ V + R GAR Sbjct: 120 NELLGRPCTKMELVHFAIEGERVACGSAHADNAAPAILGNFVLIRSYTPLDLIVIPPPEK--LFCSLVHPHTELRTSFARSVLPTDITLKDATRQWGNVGALVAGLLTSDYALVGRSLV-DVVAEPKRAPLIPGFAEVKEAALNAGALGCSIAGSGPSIFAFSDSAETAHAAGEAMQKAFLASKKSLKSDMWVSPICREGAR 318
BLAST of CB293218 vs. ExPASy Swiss-Prot
Match: KHSE_CHLPD (Homoserine kinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=thrB PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.263e-29 Identity = 82/202 (40.59%), Postives = 111/202 (54.95%), Query Frame = -2 Query: 140 NEMFGNKLLPDELVLAGLESEAKVSGF-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAAFPAEVGMPLHIWNCTQAGALVAAVLNGDPVGLGKALSSDKIVDPNRAPLIPGMEPVKKVAVEAGAYGCTISGAGPTAVAVVDNEEKGKVIGEKMVEAF-WKEGNLKAVSMVKRLDRVGAR 739 NE+ G ELV +E E G HADN APAI+G FVLIRSY PLDL+ + PE L LV P E T R+ P + + GAL+A +L D +G+AL D + +P RAPLIPG VK A++ GA GC+I+G+GP+ A ++E + +G+ M EAF E NLK+ V + + GA+ Sbjct: 120 NELLGQPCSKMELVHFAVEGERVACGSAHADNAAPAILGNFVLIRSYAPLDLITIPSPE--HLFCTLVHPHTELKTSFARSVLPRSIPLKTATQQWGNVGALIAGLLKSDYDLIGRALV-DVVAEPKRAPLIPGFLDVKHAAIDCGALGCSIAGSGPSVFAFSSSKETAERVGQAMREAFLLPETNLKSDMWVSPICKEGAK 318
BLAST of CB293218 vs. ExPASy Swiss-Prot
Match: KHSE_CHLTE (Homoserine kinase OS=Chlorobium tepidum GN=thrB PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.381e-28 Identity = 73/180 (40.56%), Postives = 101/180 (56.11%), Query Frame = -2 Query: 203 NEMFGNKLLPDELVLAGLESEAKVSGF-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAAFPAEVGMPLHIWNCTQAGALVAAVLNGDPVGLGKALSSDKIVDPNRAPLIPGMEPVKKVAVEAGAYGCTISGAGPTAVAVVDNEEKGKVIGEKMVEAF 739 NE+FG+ ELV +E E G HADN APA++G F+LIRSY PLDL+ + P K L LV P E T R+ P + + GAL+A +L D +G+AL D + +P RAPLIPG VK+ A++AGA GC+I+G+GP+ A + + + +G M AF Sbjct: 120 NELFGSPCTKMELVHFAIEGERVACGSAHADNAAPAMLGNFILIRSYNPLDLITIKPP--KNLFGTLVHPHTELKTSFARSVLPKSIPLSTATQQWGNVGALIAGLLMEDYDLIGRALV-DVVAEPKRAPLIPGFNEVKQAALDAGALGCSIAGSGPSVFAFSSSRQTAEAVGSAMQSAF 296
BLAST of CB293218 vs. ExPASy Swiss-Prot
Match: KHSE_CHLT3 (Homoserine kinase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=thrB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.305e-28 Identity = 78/201 (38.81%), Postives = 111/201 (55.22%), Query Frame = -2 Query: 140 NEMFGNKLLPDELVLAGLESEAKVSG-FHADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAAFPAEVGMPLHIWNCTQAGALVAAVLNGDPVGLGKALSSDKIVDPNRAPLIPGMEPVKKVAVEAGAYGCTISGAGPTAVAVVDNEEKGKVIGEKMVEAFWKEGNLKAVSMVKRLDRVGAR 739 N + G+ ELV +E E G HADN APA++G F+L RSY+PLDL+ ++ P +L LV P E PT R+ E+ + + GALVA +L D +G+AL D + +P RAPLIPG VK A++AGA G +I+G+GP+ A D+ K + I + M E F K NL++ + R G+R Sbjct: 120 NSLLGSPCTKMELVPFVMEGERIACGSIHADNAAPAMLGNFILTRSYDPLDLIPISTPP--ELYCSLVHPHIEVPTSHARSILKKEIALSSAVRQWGNVGALVAGLLRCDYELIGRALE-DVVAEPVRAPLIPGFYDVKHAALDAGALGGSIAGSGPSIFAFSDSLAKAETIAKAMQETFRKVSNLESDIWFCPVSREGSR 317
BLAST of CB293218 vs. ExPASy Swiss-Prot
Match: KHSE_CHLPB (Homoserine kinase OS=Chlorobium phaeobacteroides (strain BS1) GN=thrB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.865e-27 Identity = 73/180 (40.56%), Postives = 98/180 (54.44%), Query Frame = -2 Query: 203 NEMFGNKLLPDELVLAGLESEAKVSGF-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAAFPAEVGMPLHIWNCTQAGALVAAVLNGDPVGLGKALSSDKIVDPNRAPLIPGMEPVKKVAVEAGAYGCTISGAGPTAVAVVDNEEKGKVIGEKMVEAF 739 NE+ G ELV +E E G HADN APA++G FVLIRSY P+DL+ + P+ L LV P E T R+ P + + GAL++ +L D +G++L D I +P RAPLIPG VK A+EAGA GC+I+G+GP+ A + E +GE M AF Sbjct: 120 NELMGRPCNKMELVNFAIEGERVACGSAHADNAAPAMLGNFVLIRSYNPIDLITIPSPDN--LYCTLVHPHIEVRTAYARSVLPRMISLKTATEQWGNVGALISGLLTSDYELIGRSLV-DVIAEPKRAPLIPGFYDVKHAALEAGAIGCSIAGSGPSIFAFSSSPETASRVGEAMQTAF 296
BLAST of CB293218 vs. ExPASy Swiss-Prot
Match: KHSE_PYRHO (Homoserine kinase OS=Pyrococcus horikoshii GN=thrB PE=3 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.145e-22 Identity = 73/188 (38.83%), Postives = 107/188 (56.91%), Query Frame = -2 Query: 152 DELVL-AGLESEAKVSGF-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAAFPAEVGMPLHIWNCTQAGALVAAVLNGDPVGLGKALSSDKIVDPNRAPLIPGMEPVKKVAVEAGAYGCTISGAGPTAVAVVDNEEKGKVIGEKMVEAFWKEGNLKAVSMVKRLDR 709 DEL+L A ++ E K SG H DN+ P+ GGF +I S PL R++F + K L V+V PE E PT K R P+ V + + N A +L+ A+ GD +G+ L D + P R L+P + +++VA+E GAYG T+SG+GP A+ +N K IG+ +VE F +E +KA V + R Sbjct: 111 DELILKAAMKGEEKASGEPHPDNVVPSYYGGFTVIESKSPL---RVHFVDAK-LRGVVVLPEVEIPTAKARKILPSMVPLKDAVKNIAMASSLILALKEGDLETIGRLLD-DNLALPYRKKLMPWFDEIRRVALETGAYGITVSGSGPALFAIGENL---KDIGKTIVEKF-EELGIKAEYWVTKTGR 289
BLAST of CB293218 vs. ExPASy Swiss-Prot
Match: KHSE_PYRAB (Homoserine kinase OS=Pyrococcus abyssi GN=thrB PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.952e-22 Identity = 67/170 (39.41%), Postives = 98/170 (57.65%), Query Frame = -2 Query: 209 DELVL-AGLESEAKVSGF-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAAFPAEVGMPLHIWNCTQAGALVAAVLNGDPVGLGKALSSDKIVDPNRAPLIPGMEPVKKVAVEAGAYGCTISGAGPTAVAVVDN-EEKGKVIGEKMVE 709 DEL++ A LE E SG H DN+ P+ GGF ++ S PL + R++ +L V+V PE E PTK+ R P +V + I N A +LV A+ GD +G+ L D + P R L+P + V+K +EAGAYG T+SG+GP+ A+ +N ++ GK + EK E Sbjct: 111 DELIIMAALEGEKAASGSPHGDNVIPSYYGGFNILESLNPLRVHRVDV----ELNVVVVLPEVEVPTKEARRIVPEKVPLKDAIKNLAMASSLVLALKEGDIETVGRLLD-DNLALPYRKKLMPWFDEVRKAGLEAGAYGVTVSGSGPSLFAIGENLKDIGKAMKEKFEE 275
BLAST of CB293218 vs. ExPASy Swiss-Prot
Match: KHSE_PYRIL (Homoserine kinase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=thrB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.819e-21 Identity = 68/177 (38.42%), Postives = 97/177 (54.80%), Query Frame = -2 Query: 179 AGLESEAKVSGFHADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPE---FEAPTKKMRAAFPAEVGMPLHIWNCTQAGALVAAVLNGDP--VGLGKALSSDKIVDPNRAPLIPGMEPVKKVAVEAGAYGCTISGAGPTAVAVVDNEEKGKVIGEKMVEAFWKEGNLKA 694 AGL A H DN+A A +GG V+I S +PL+L++ +L+FV+ P+ TK MR+ P EV ++ + ALVA DP V LG SD++V+P RAP +P VK+ A+EAGA +ISGAGP+ +A+V EEK + + VE + E L+A Sbjct: 115 AGLGEVAAAGSPHFDNVAAAALGGAVVIASVKPLELVKF----MPKLIFVIGVPDVPPMPEKTKVMRSVLPREVSFRTYVAQLARVSALVAGFAKSDPRLVALGM---SDEVVEPARAPYVPAYGRVKRYALEAGALAVSISGAGPSIIALV--EEKNSDVVKAAVERAYIEEGLRA 282
BLAST of CB293218 vs. ExPASy Swiss-Prot
Match: KHSE_THENV (Homoserine kinase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=thrB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.203e-21 Identity = 65/174 (37.36%), Postives = 94/174 (54.02%), Query Frame = -2 Query: 179 AGLESEAKVSGFHADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAAFPAEVGMPLHIWNCTQAGALVAAVLNGDP--VGLGKALSSDKIVDPNRAPLIPGMEPVKKVAVEAGAYGCTISGAGPTAVAVVDNEEKGKVIGEKMVEAFWKEGNLKA 694 AGL A H DN+A A +GG V+I S +PL+L++ + P ++ V P TK MR+ P EV ++ + ALVA DP V LG SD++V+P RAP +P V++ A+EAGA ISGAGP+ +A+V++ + G V VE + E L+A Sbjct: 115 AGLGEAAAAGSPHFDNVAAAALGGAVVIASVKPLELVKFS-PRLTFVVGVPDVPPMPEKTKVMRSVLPREVPFRTYVAQLARVSALVAGFARSDPRLVALGM---SDEVVEPARAPHVPAYARVRRYALEAGALAVAISGAGPSMIALVEDRDSGAV--RAAVERAYAEEGLRA 282
BLAST of CB293218 vs. ExPASy Swiss-Prot
Match: KHSE_METMP (Homoserine kinase OS=Methanococcus maripaludis GN=thrB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.317e-20 Identity = 66/166 (39.76%), Postives = 90/166 (54.22%), Query Frame = -2 Query: 245 NEMFGNKLLPDELVLAGLESEAKVSGF-HADNIAPAIMGGFVLIRSYEPLDLMRLNFPEKKQLLFVLVTPEFEAPTKKMRAAFPAEVGMPLHIWNCTQAGALVAAVLNGDPVGLGKALSSDKIVDPNRAPLIPGMEPVKKVAVEAGAYGCTISGAGPTAVAVVDNE 739 NE+F KL ELV EA +G HADN+APAI GGF L SYEPL++ L+ P ++L L P + TK R P E+ + + N +A +V A+ N D G+ +S D +V+P RA LI G VK+ V+ YG TISG+GP + + E Sbjct: 109 NELFELKLSKLELVKYSSLGEAVAAGAPHADNVAPAIFGGFTLTTSYEPLEV--LHIPVDLEVLVAL--PNIQVSTKTAREILPKEIPIKDMVNNVGKAAGMVYALYNNDLDLFGRYMSKDCVVEPCRANLIDGYTEVKE-KVKDMVYGITISGSGPAIITIPKKE 269 The following BLAST results are available for this feature:
BLAST of CB293218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293218 ID=CB293218; Name=CB293218; organism=Citrus sinensis; type=EST; length=779bpback to top |