CB293221

Overview
NameCB293221
Unique NameCB293221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293221 vs. ExPASy Swiss-Prot
Match: BGL34_ORYSJ (Beta-glucosidase 34 OS=Oryza sativa subsp. japonica GN=BGLU34 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.378e-48
Identity = 90/127 (70.87%), Postives = 107/127 (84.25%), Query Frame = 1
Query:  481 IANLVVSLLLVAFGIQTCSSQ-----INRASFPKGFVFGTASSAFQYEGAVKEDGRGPTVWDTFSHTFGKILDNSNADVAVDQYHRYPEDVQLMKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHY 846
            +  +V+ L+L+A   Q C +Q     + R SFP GFVFGTASSA+QYEGAVKEDGRGPT+WD F+HTFGKI+D SNADVAVDQYHR+ ED+QLM DMGMDAYRFSI+WSRIFPNGTG++NQAG+DHY
Sbjct:    8 MVEVVILLVLMAMS-QGCDAQNTTGGLTRKSFPNGFVFGTASSAYQYEGAVKEDGRGPTIWDKFAHTFGKIIDFSNADVAVDQYHRFEEDIQLMADMGMDAYRFSISWSRIFPNGTGEVNQAGIDHY 133          
BLAST of CB293221 vs. ExPASy Swiss-Prot
Match: BGL06_ORYSJ (Beta-glucosidase 6 OS=Oryza sativa subsp. japonica GN=BGLU6 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.013e-47
Identity = 88/127 (69.29%), Postives = 105/127 (82.68%), Query Frame = 1
Query:  496 VSLLLVAFGIQTCSSQ----------INRASFPKGFVFGTASSAFQYEGAVKEDGRGPTVWDTFSHTFGKILDNSNADVAVDQYHRYPEDVQLMKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHY 846
            V++L+V FG+ + S +          + R SFP+GFVFGTAS+A+QYEGAVKEDGRG T+WDTF+HTFGKI D SNADVAVDQYHR+ ED+QLM DMGMDAYRFSIAWSRI+PNG GQ+NQAG+DHY
Sbjct:   19 VAVLVVVFGVASSSLRGCIAQQSGGGLTRGSFPEGFVFGTASAAYQYEGAVKEDGRGQTIWDTFAHTFGKITDFSNADVAVDQYHRFEEDIQLMADMGMDAYRFSIAWSRIYPNGVGQVNQAGIDHY 145          
BLAST of CB293221 vs. ExPASy Swiss-Prot
Match: BGL40_ARATH (Beta-glucosidase 40 OS=Arabidopsis thaliana GN=BGLU40 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.485e-47
Identity = 87/108 (80.56%), Postives = 98/108 (90.74%), Query Frame = 1
Query:  526 QTC-SSQINRASFPKGFVFGTASSAFQYEGAVKEDGRGPTVWDTFSHTFGKILDNSNADVAVDQYHRYPEDVQLMKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHY 846
            +TC  + I+R SFPKGFVFGTASSAFQ+EGAVK +GRGPT+WDTFSHTFGKI D SNADVAVDQYHRY EDVQLMK+MGMDAYRFSI+W+RIFPNG G IN+AG+DHY
Sbjct:   25 KTCICADISRGSFPKGFVFGTASSAFQHEGAVKAEGRGPTIWDTFSHTFGKITDFSNADVAVDQYHRYEEDVQLMKNMGMDAYRFSISWTRIFPNGVGHINEAGIDHY 132          
BLAST of CB293221 vs. ExPASy Swiss-Prot
Match: BGL25_ORYSJ (Beta-glucosidase 25 OS=Oryza sativa subsp. japonica GN=BGLU25 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 4.495e-39
Identity = 72/118 (61.02%), Postives = 92/118 (77.97%), Query Frame = 1
Query:  493 VVSLLLVAFGIQTCSSQINRASFPKGFVFGTASSAFQYEGAVKEDGRGPTVWDTFSHTFGKILDNSNADVAVDQYHRYPEDVQLMKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHY 846
            +++L+ +      C   I+RA FP GF+FGTASSA+QYEGAV E  RGPT+WDT +   G+++D SNADVAVD YHRY EDV+LM D+GMDAYRFSI+WSRIFPNGTG+ N+ G+ +Y
Sbjct:    3 LLTLVHILVSFSACVEAISRADFPPGFIFGTASSAYQYEGAVNEGQRGPTIWDTLTKRPGRVIDFSNADVAVDHYHRYKEDVELMNDIGMDAYRFSISWSRIFPNGTGEPNEEGLSYY 120          
BLAST of CB293221 vs. ExPASy Swiss-Prot
Match: BGL41_ARATH (Putative beta-glucosidase 41 OS=Arabidopsis thaliana GN=BGLU41 PE=3 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.768e-35
Identity = 70/105 (66.67%), Postives = 85/105 (80.95%), Query Frame = 1
Query:  535 SSQINRASFPKGFVFGTASSAFQYEGAVKEDGRGPTVWDTFSHTF-GKILDNSNADVAVDQYHRYPEDVQLMKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHY 846
            S  I+RA+FP GFVFGTASSA+Q+EGAVKE  +G ++WDTF+    GKILD SNAD  VDQYHR+  D+ LMKD+ MDAYRFSI+WSRIFPNGTG++N  GV +Y
Sbjct:   27 SESISRANFPDGFVFGTASSAYQFEGAVKEGNKGESIWDTFTKEKPGKILDFSNADTTVDQYHRFHNDIDLMKDLRMDAYRFSISWSRIFPNGTGEVNPDGVKYY 131          
BLAST of CB293221 vs. ExPASy Swiss-Prot
Match: BGL26_ORYSJ (Beta-glucosidase 26 OS=Oryza sativa subsp. japonica GN=BGLU26 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.015e-35
Identity = 65/101 (64.36%), Postives = 82/101 (81.19%), Query Frame = 1
Query:  544 INRASFPKGFVFGTASSAFQYEGAVKEDGRGPTVWDTFSHTFGKILDNSNADVAVDQYHRYPEDVQLMKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHY 846
            ++R +FP+GFVFGTA+SA+Q EG  K+ GRGP++WD F    G I +N+ ADV VD+YHRY EDV +MK+MG DAYRFSI+WSRIFPNGTG +NQ GVD+Y
Sbjct:   40 LSRRAFPEGFVFGTAASAYQVEGMAKQGGRGPSIWDAFIEKPGTIPNNATADVTVDEYHRYKEDVNIMKNMGFDAYRFSISWSRIFPNGTGMVNQEGVDYY 140          
BLAST of CB293221 vs. ExPASy Swiss-Prot
Match: BGL35_ORYSJ (Putative beta-glucosidase 35 OS=Oryza sativa subsp. japonica GN=BGLU35 PE=3 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 5.686e-34
Identity = 73/131 (55.73%), Postives = 94/131 (71.76%), Query Frame = 1
Query:  463 MVFKSGIANLVVSLLLVAFGIQTCS-SQINRASFPKGFVFGTASSAFQYEGAVKEDGRGPTVWDTFSHTFGKILDNSNADVAVDQYHRYPEDVQLMKDMGMDAYRFSIAWSRIFPNG--TGQINQAGVDHY 846
            M  + G   L+++LLL A      + ++ +R SFPK F+FGT S+A+QYEGA KE G+GP++WDTF+H  GKIL+N   DVA D YHRY EDV L+KDM MDA+RFSIAW+RI PNG  +G IN+ GV  Y
Sbjct:    1 MGIRMGRRLLLITLLLGALLCNNVAYAKFSRYSFPKDFIFGTGSAAYQYEGAYKEGGKGPSIWDTFTHIPGKILNNDTGDVANDFYHRYKEDVNLLKDMNMDAFRFSIAWTRILPNGSLSGGINREGVAFY 131          
BLAST of CB293221 vs. ExPASy Swiss-Prot
Match: BGL30_ORYSJ (Beta-glucosidase 30 OS=Oryza sativa subsp. japonica GN=BGLU30 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.427e-34
Identity = 71/121 (58.68%), Postives = 87/121 (71.90%), Query Frame = 1
Query:  490 LVVSLLLVAFGIQTCSSQINRASFPKGFVFGTASSAFQYEGAVKEDGRGPTVWDTFSHTFGKILDNSNADVAVDQYHRYPEDVQLMKDMGMDAYRFSIAWSRIFPNG--TGQINQAGVDHY 846
            L+ +L L A       ++  R SFPK F+FGT S+A+QYEGA KE G+GP+VWD F+H  GKIL+N N DVA D YHRY EDV L+KDM MDA+RFSIAW+RI PNG  +G IN+ GV  Y
Sbjct:    9 LLFTLFLGALFCNGVYAKFTRYSFPKDFIFGTGSAAYQYEGAYKEGGKGPSVWDNFTHIPGKILNNDNGDVANDFYHRYKEDVSLLKDMNMDAFRFSIAWTRILPNGSLSGGINKEGVAFY 129          
BLAST of CB293221 vs. ExPASy Swiss-Prot
Match: BGL13_ORYSJ (Beta-glucosidase 13 OS=Oryza sativa subsp. japonica GN=BGLU13 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 7.427e-34
Identity = 69/125 (55.20%), Postives = 92/125 (73.60%), Query Frame = 1
Query:  481 IANLVVSLLLVAFGIQTCSSQINRASFPKGFVFGTASSAFQYEGAVKEDGRGPTVWDTFSHTF-GKILDNSNADVAVDQYHRYPEDVQLMKDMGMDAYRFSIAWSRIFPNG--TGQINQAGVDHY 846
            +  +++ LLLV   +      I+R SFP+GF+FGTASS++QYEG  +E GRGP++WDTF+H    KI D SN DVA D YH Y EDV++MKDMG+DAYRFSI+W+RI PNG  +G IN+ G+ +Y
Sbjct:   10 LGGILLPLLLVV-AVSGEPPPISRRSFPEGFIFGTASSSYQYEGGAREGGRGPSIWDTFTHQHPDKIADKSNGDVAADSYHLYKEDVRIMKDMGVDAYRFSISWTRILPNGSLSGGINREGISYY 133          
BLAST of CB293221 vs. ExPASy Swiss-Prot
Match: BGL12_ORYSJ (Beta-glucosidase 12 OS=Oryza sativa subsp. japonica GN=BGLU12 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 7.427e-34
Identity = 71/128 (55.47%), Postives = 92/128 (71.88%), Query Frame = 1
Query:  478 GIANLVVSLLLVAFGIQTCSSQ--INRASFPKGFVFGTASSAFQYEGAVKEDGRGPTVWDTFSHTFG-KILDNSNADVAVDQYHRYPEDVQLMKDMGMDAYRFSIAWSRIFPNGT--GQINQAGVDHY 846
            G+    + L +VA G    + +  ++R SFPKGF+FGTASS++QYEG   E GRGP++WDTF+H    KI D SN DVA D YH Y EDV+LMKDMGMDAYRFSI+W+RI PNG+  G +N+ G+ +Y
Sbjct:   10 GLLLTFLLLAVVASGAYNGAGEPPVSRRSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNGDVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYY 137          
The following BLAST results are available for this feature:
BLAST of CB293221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
BGL34_ORYSJ2.378e-4870.87Beta-glucosidase 34 OS=Oryza sativa subsp. japonic... [more]
BGL06_ORYSJ2.013e-4769.29Beta-glucosidase 6 OS=Oryza sativa subsp. japonica... [more]
BGL40_ARATH4.485e-4780.56Beta-glucosidase 40 OS=Arabidopsis thaliana GN=BGL... [more]
BGL25_ORYSJ4.495e-3961.02Beta-glucosidase 25 OS=Oryza sativa subsp. japonic... [more]
BGL41_ARATH1.768e-3566.67Putative beta-glucosidase 41 OS=Arabidopsis thalia... [more]
BGL26_ORYSJ3.015e-3564.36Beta-glucosidase 26 OS=Oryza sativa subsp. japonic... [more]
BGL35_ORYSJ5.686e-3455.73Putative beta-glucosidase 35 OS=Oryza sativa subsp... [more]
BGL30_ORYSJ7.427e-3458.68Beta-glucosidase 30 OS=Oryza sativa subsp. japonic... [more]
BGL13_ORYSJ7.427e-3455.20Beta-glucosidase 13 OS=Oryza sativa subsp. japonic... [more]
BGL12_ORYSJ7.427e-3455.47Beta-glucosidase 12 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05da09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05da09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293221 ID=CB293221; Name=CB293221; organism=Citrus sinensis; type=EST; length=847bp
GCCCGTGGGTGACCCGTTACCACTATGTATCATGTTCAATCTCGAAGACA
CTATAACTTATAAGGCTTGATACCGTGTGCACACCATTAAACTAGCTCAG
TGGGAAATGATACGCAAACCCCACGCCAACAACCCTGACATACAAGTGAA
TTTCAGACTGTCCAATTTTTTTTTGTAGTTCTCAATTGCGTGGGGCGTAT
TTTATCATTCCCAAACTCACTGCCATTTCTGGCTTTCTTAACGACCCCAA
TAGTTATTATTTCGCAATATTTTAATTTCTTTCCTTAAATCTCATCCCTT
TCCTCTTTTCTATATAATCCCAAAACCAATTTTGCTTTGCTACAACTTTA
CATGAATTAACTCCCTCTCTTGAGTCTTGGCTTTTATTCTTCACATCCGC
ATCACCTCTTTTTACGTATCATTTTATCATTAATTTCTCTGTGGGGATTG
TGAAGTTACACCATGGTGTTTAAAAGCGGCATTGCTAATTTGGTCGTATC
ACTACTACTGGTTGCGTTTGGGATCCAGACTTGCTCTTCACAAATTAACA
GAGCTAGCTTCCCAAAGGGTTTTGTTTTTGGGACTGCATCCTCTGCTTTC
CAGTATGAAGGAGCAGTGAAAGAGGATGGAAGGGGACCGACTGTCTGGGA
CACATTTTCACATACTTTTGGTAAGATACTGGATAATAGTAATGCTGATG
TTGCCGTGGATCAGTACCACCGCTACCCTGAAGATGTACAACTTATGAAG
GACATGGGCATGGATGCTTACCGGTTTTCTATTGCTTGGTCTCGGATTTT
CCCCAATGGAACGGGGCAAATAAATCAGGCAGGTGTTGATCATTACA
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