CB293257

Overview
NameCB293257
Unique NameCB293257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length536
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7551 contig Csv1_Contig7551:45..576. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293257 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 6.999e-74
Identity = 136/144 (94.44%), Postives = 138/144 (95.83%), Query Frame = 1
Query:  103 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 534
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSDPSVQSD+KLWPFKVI G GDKPMIVV YKGEEKQF+AEEISSMVL KMKEIAEAYLGTTIK
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDPSVQSDIKLWPFKVIPGPGDKPMIVVTYKGEEKQFAAEEISSMVLTKMKEIAEAYLGTTIK 144          
BLAST of CB293257 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 4.537e-73
Identity = 135/144 (93.75%), Postives = 138/144 (95.83%), Query Frame = 1
Query:  103 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 534
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD SVQSDMKLWPFKVI G GDKPMIVVNYKGEEKQFSAEEISSMVL KMKEIAEA+LGTT+K
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQSDMKLWPFKVIPGPGDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAFLGTTVK 144          
BLAST of CB293257 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 3.251e-71
Identity = 130/144 (90.28%), Postives = 136/144 (94.44%), Query Frame = 1
Query:  103 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 534
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVA+NP NTVFDAKRLIGRRFSD SVQ DMKLWPFKVI G GDKPMIVV YKGEEK+F+AEEISSMVL KMKEIAEA+LG+T+K
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVALNPINTVFDAKRLIGRRFSDASVQEDMKLWPFKVIPGPGDKPMIVVTYKGEEKEFAAEEISSMVLTKMKEIAEAFLGSTVK 144          
BLAST of CB293257 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 263.077 bits (671), Expect = 6.132e-70
Identity = 129/144 (89.58%), Postives = 135/144 (93.75%), Query Frame = 1
Query:  103 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 534
            M+GKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD SVQSDMKLWPFK+ AG  DKPMI V YKGEEK+F+AEEISSMVL KM+EIAEAYLG TIK
Sbjct:    1 MSGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPADKPMIYVEYKGEEKEFAAEEISSMVLIKMREIAEAYLGVTIK 144          
BLAST of CB293257 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 1.784e-69
Identity = 127/144 (88.19%), Postives = 136/144 (94.44%), Query Frame = 1
Query:  103 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 534
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD SVQSD +LWPF +I+G  +KPMIVV YKGEEKQF+AEEISSMVL KM+EIAEA+LGTT+K
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPVNTVFDAKRLIGRRFSDASVQSDRQLWPFTIISGTAEKPMIVVEYKGEEKQFAAEEISSMVLIKMREIAEAFLGTTVK 144          
BLAST of CB293257 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 2.330e-69
Identity = 127/144 (88.19%), Postives = 137/144 (95.14%), Query Frame = 1
Query:  103 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 534
            MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRF+D SVQSD+KLWPF + +G  +KPMIVVNYKGE+K+FSAEEISSM+L KM+EIAEAYLGTTIK
Sbjct:    1 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFTDSSVQSDIKLWPFTLKSGPAEKPMIVVNYKGEDKEFSAEEISSMILIKMREIAEAYLGTTIK 144          
BLAST of CB293257 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 257.299 bits (656), Expect = 3.365e-68
Identity = 128/144 (88.89%), Postives = 136/144 (94.44%), Query Frame = 1
Query:  103 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 534
            MAGKGEGPAIGIDLGTTYS VGVWQHDRVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD SVQ+DMK  PFKV++G G+KPMI VNYKGEEKQF+AEEISSMVL KMKEIAEAYLG+T+K
Sbjct:    1 MAGKGEGPAIGIDLGTTYSRVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDASVQADMKHRPFKVVSGPGEKPMIGVNYKGEEKQFAAEEISSMVLTKMKEIAEAYLGSTVK 144          
BLAST of CB293257 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 9.789e-68
Identity = 128/141 (90.78%), Postives = 133/141 (94.33%), Query Frame = 1
Query:  112 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 534
            KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFS P+VQS MKLWP + + G GDKPMIV NYKGEEKQF+AEEISSMVL KMKEIAEAYLG+TIK
Sbjct:    3 KGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSSPAVQSSMKLWPSRHL-GLGDKPMIVFNYKGEEKQFAAEEISSMVLIKMKEIAEAYLGSTIK 142          
BLAST of CB293257 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 1.911e-63
Identity = 120/139 (86.33%), Postives = 127/139 (91.37%), Query Frame = 1
Query:  118 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTIK 534
            EG AIGIDLGTTYSCVGVWQ+DRVEII NDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP NTVFDAKRLIGRRFSD SVQ+DMKLWPFKV     DKPMIVVNYKGEEK+FSAEEISSMVL KM+E+AEA+LG  +K
Sbjct:    5 EGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDSSVQNDMKLWPFKVGGSPCDKPMIVVNYKGEEKKFSAEEISSMVLVKMREVAEAFLGHAVK 143          
BLAST of CB293257 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 2.335e-61
Identity = 120/143 (83.92%), Postives = 129/143 (90.21%), Query Frame = 1
Query:  103 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIAGAGDKPMIVVNYKGEEKQFSAEEISSMVLNKMKEIAEAYLGTTI 531
            MA KG G AIGIDLGTTYSCVGVWQ+DRVEIIANDQGNRTTPSY AFTDT RLIGDA KNQVAMNP+NTVFDAKRLIGRRF+ PSVQSDMKLWP +VI G G+KPMIVVNYKGE KQF+AEEISSMVL KM EIAEA+LG ++
Sbjct:    1 MASKG-GKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYFAFTDTSRLIGDA-KNQVAMNPSNTVFDAKRLIGRRFNHPSVQSDMKLWPLQVIPGPGEKPMIVVNYKGESKQFAAEEISSMVLIKMLEIAEAFLGHSV 141          
The following BLAST results are available for this feature:
BLAST of CB293257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_PETHY6.999e-7494.44Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP72_SOLLC4.537e-7393.75Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP71_SOLLC3.251e-7190.28Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP71_ARATH6.132e-7089.58Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP72_ARATH1.784e-6988.19Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP73_ARATH2.330e-6988.19Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP7E_SPIOL3.365e-6888.89Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP70_MAIZE9.789e-6890.78Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_SOYBN1.911e-6386.33Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_DAUCA2.335e-6183.92Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_05dc07_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05dc07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293257 ID=CB293257; Name=CB293257; organism=Citrus sinensis; type=EST; length=536bp
GCCCGTGGTAACAATCAATAAGTAAACACTAAAGCTCGCAAATCCTCCGT
GCTTTTTTTCTTTTTTTTTTTATTGTTGATAGATTCTTGATTTTGTTAAT
CGATGGCTGGAAAAGGCGAAGGTCCTGCTATTGGAATTGACTTGGGCACG
ACTTACTCTTGTGTCGGTGTCTGGCAACATGATCGAGTTGAGATCATCGC
TAATGATCAAGGTAACCGAACGACGCCGTCTTATGTGGCGTTTACTGATA
CGGAGCGTTTGATCGGTGATGCTGCCAAGAACCAGGTCGCCATGAACCCC
ACCAACACTGTTTTTGATGCTAAGCGTTTGATTGGGAGGCGATTCAGTGA
TCCTTCAGTACAGAGTGACATGAAACTATGGCCGTTCAAGGTCATTGCTG
GAGCAGGTGACAAGCCTATGATCGTTGTCAATTACAAAGGCGAAGAGAAG
CAATTTTCTGCAGAAGAAATCTCCTCAATGGTTCTAAATAAGATGAAGGA
GATTGCTGAGGCTTATCTGGGCACTACTATTAAGAA
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