CB293329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293329 vs. ExPASy Swiss-Prot
Match: AMYB_IPOBA (Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4) HSP 1 Score: 112.464 bits (280), Expect = 2.989e-24 Identity = 66/211 (31.28%), Postives = 109/211 (51.66%), Query Frame = 1 Query: 13 FFLSWYSSQFLSHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENV---------VDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGDDLPVEEEVTESVHTNANMNIQV 618 FFL+WYS++ + HG+ +L A+ F V+I K+ IH WY SH +ELTAGFYN A RDGY +A M A++ + +++ D QP E+ S+P+ L+ Q+ ++ K ++V+G+N+ + QM N+ V + TY R+ ++F F KFV+ ++H D P ++ +V +N I + Sbjct: 264 FFLTWYSNKLIIHGDQVLEEANKVFVGLRVNIAAKVSGIHWWYNHVSHAAELTAGFYNVAGRDGYRPIARMLARHHATLNFTCLEMRDSEQPAEAKSAPQELVQQVLSSGWKEYIDVAGENALPRYDATAYNQMLLNVRPNGVNLNGPPKLKMSGLTYLRLSDDLLQTDNFELFKKFVK-----KMHADLDPSPNAISPAVLERSNSAITI 469
BLAST of CB293329 vs. ExPASy Swiss-Prot
Match: AMYB_ARATH (Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.363e-23 Identity = 62/211 (29.38%), Postives = 107/211 (50.71%), Query Frame = 1 Query: 13 FFLSWYSSQFLSHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENV---------VDLFTYQRMGAYFFSPEHFPSFTKFVRNLN-QLELHGDDLPVEEEVTESVHTNANMNIQ 615 FF++WYS++ + HG+ +L A+ F V++ K+ IH Y SH +ELTAG+YN KRDGY +A M +K+ + +++ D E+ S+P+ L+ ++ + K G+EV+G+N+ T G+ Q+ N V + FTY R+ F +F F K VR ++ + GD E+ +N+ + ++ Sbjct: 264 FFMTWYSNKLIFHGDQILGEANKIFAGLKVNLAAKVSGIHWLYNHHSHAAELTAGYYNLFKRDGYRPIARMLSKHYGILNFTCLEMKDTDNTAEALSAPQELVQEVLSKAWKEGIEVAGENALETYGAKGYNQILLNARPNGVNPNGKPKLRMYGFTYLRLSDTVFQENNFELFKKLVRKMHADQDYCGDAAKYGHEIVPLKTSNSQLTLE 474
BLAST of CB293329 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.040e-21 Identity = 58/190 (30.53%), Postives = 100/190 (52.63%), Query Frame = 1 Query: 13 FFLSWYSSQFLSHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENV---------VDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGDD 555 FFL+WYS+Q L+HG+ +L A+ F V + K+ IH WYK ++H +ELTAG+YN RDGY +A+M +++ + +++ D Q ++ S+P+ L+ Q+ + + +EV+G+N+ + Q+ N + V + TY R+ +F F KFV ++ + H DD Sbjct: 262 FFLTWYSNQLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHGILNFTCLEMRDSEQSSDAQSAPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKLRMYGVTYLRLSDDLLQESNFEIFKKFVVKMHADQSHCDD 451
BLAST of CB293329 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.176e-20 Identity = 57/189 (30.16%), Postives = 99/189 (52.38%), Query Frame = 1 Query: 13 FFLSWYSSQFLSHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENV---------VDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGD 552 FFL+WYS+Q L+HG+ +L A+ F V++ K+ IH WYK ++H +ELTAG+YN RDGY +A+M +++ + +++ D Q ++ S P+ L+ Q+ + + +EV+G+N+ + Q+ N + V + TY R+ +F F KFV +++H D Sbjct: 262 FFLTWYSNQLLNHGDEILDEANKAFLGCKVNLAIKVSGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHASLNFTCLEMRDSEQSSDAQSGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKHRMYGVTYLRLSDELLQQSNFDIFKKFV-----VKMHAD 445
BLAST of CB293329 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 1.176e-20 Identity = 58/189 (30.69%), Postives = 98/189 (51.85%), Query Frame = 1 Query: 13 FFLSWYSSQFLSHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENV-------VDLF--TYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGD 552 FFL+WYS++ L+HG+ +L A+ F V + K+ IH WYK +H +ELTAG+YN RDGY +A M +++ + +++ D QP ++ S P+ L+ Q+ + + + V+G+N+ + Q+ N + V + +F TY R+ +F F KFV L++H D Sbjct: 262 FFLTWYSNKLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNAKPQGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFV-----LKMHAD 445
BLAST of CB293329 vs. ExPASy Swiss-Prot
Match: AMYB_MAIZE (Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.005e-20 Identity = 60/208 (28.85%), Postives = 103/208 (49.52%), Query Frame = 1 Query: 13 FFLSWYSSQFLSHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGF---------EQMKKNLFGENVVDLFTYQRMGAYFFSPEHFPSFTKFVRNLN-------------QLELHGDDLPVEE 570 FFL+WYS++ + HG+ +L A+ F V + K+ IH WY +H +ELTAG+YN RDGY +A M ++ M ++ D Q E+ S+PE L+ Q+ +A + G+ ++ +N+ + + + KN E+ + FTY R+ F +++ +F FVR ++ LE ++P+EE Sbjct: 259 FFLTWYSNKLIKHGDKILDEANKVFLGCKVQLAIKVSGIHWWYNVPNHAAELTAGYYNLDDRDGYRTIAHMLTRHRASMNFTCAEMRDSEQSSEAKSAPEELVQQVLSAGWREGLNLACENALNRYDATAYNTILRNARPQGINKNGPPEHKLHGFTYLRVSDELFQEQNYTTFKTFVRRMHANLDYNPNVDPVAPLERSKAEIPIEE 466
BLAST of CB293329 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.467e-20 Identity = 57/189 (30.16%), Postives = 98/189 (51.85%), Query Frame = 1 Query: 13 FFLSWYSSQFLSHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENV---------VDLFTYQRMGAYFFSPEHFPSFTKFVRNLNQLELHGD 552 FFL+WYS+Q L+HG+ +L A+ F V + K+ IH WYK +H +ELTAG+YN RDGY +A++ +++ + +++ D Q ++ SSP+ L+ Q+ + + +EV+G+N+ + Q+ N + V + TY R+ +F F KFV +++H D Sbjct: 262 FFLTWYSNQLLNHGDQILDEANKAFLGCKVKLAIKVSGIHWWYKAPNHAAELTAGYYNLDDRDGYRPIAKIVSRHHAILNFTCLEMRDSEQSSDAHSSPQKLVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKLRMYGVTYLRLSDDLMQQSNFDIFKKFV-----VKMHAD 445
BLAST of CB293329 vs. ExPASy Swiss-Prot
Match: AMYB_HORSP (Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.834e-20 Identity = 57/188 (30.32%), Postives = 93/188 (49.47%), Query Frame = 1 Query: 13 FFLSWYSSQFLSHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKN---------------LFGENVVDLFTYQRMGAYFFSPEHFPSFTKFVRNLN 531 FFL+WYS+ + HG+ +L A+ F V + KI IH WYK SH +ELTAG+YN RDGY +A M ++ + ++ D Q ++ S+PE L+ Q+ +A + G+ V+ +N+ P + + +N LFG FTY R+ +++ +F FV ++ Sbjct: 259 FFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQSSQAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFG------FTYLRLSNQLVEGQNYVNFKTFVDRMH 440
BLAST of CB293329 vs. ExPASy Swiss-Prot
Match: AMYB_WHEAT (Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.619e-20 Identity = 56/182 (30.77%), Postives = 94/182 (51.65%), Query Frame = 1 Query: 13 FFLSWYSSQFLSHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGF---------EQMKKNLFGENVVDLFTYQRMGAYFFSPEHFPSFTKFVRNLN 531 FFLSWYS++ + HG+ +L A+ F V + KI IH WY+ +H +ELTAG+YN RDGY +A M ++ M ++ D Q E+ S+PE L+ Q+ +A + G+ V+ +N+ + + + KN E+ + FTY R+ +++ +F FV ++ Sbjct: 259 FFLSWYSNKLIKHGDKILDEANKVFLGCRVQLAIKISGIHWWYRVPNHAAELTAGYYNLDDRDGYRTIARMLTRHHASMNFTCAEMRDSEQSEEAKSAPEELVQQVLSAGWREGLHVACENALGRYDATAYNTILRNARPKGINKNGPPEHKLFGFTYLRLSNELLEGQNYATFQTFVEKMH 440
BLAST of CB293329 vs. ExPASy Swiss-Prot
Match: AMYB_HORVU (Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.300e-19 Identity = 57/188 (30.32%), Postives = 93/188 (49.47%), Query Frame = 1 Query: 13 FFLSWYSSQFLSHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGFYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQIRTACNKHGVEVSGQNSSVTGAPGGFEQMKKN---------------LFGENVVDLFTYQRMGAYFFSPEHFPSFTKFVRNLN 531 FFL+WYS+ + HG+ +L A+ F V + KI IH WYK SH +ELTAG+YN RDGY +A M ++ + ++ D Q ++ S+PE L+ Q+ +A + G+ V+ +N+ P + + +N LFG FTY R+ +++ +F FV ++ Sbjct: 259 FFLAWYSNNLIKHGDRILDEANKVFLGYKVQLAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDLEQSSQAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFG------FTYLRLSNQLVEGQNYVNFKTFVDRMH 440 The following BLAST results are available for this feature:
BLAST of CB293329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293329 ID=CB293329; Name=CB293329; organism=Citrus sinensis; type=EST; length=820bpback to top |