CB293419

Overview
NameCB293419
Unique NameCB293419
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.784e-18
Identity = 64/203 (31.53%), Postives = 101/203 (49.75%), Query Frame = 2
Query:  146 DFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSG-AFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVR 739
            D+    D     RE  +KY+  +  LA  L   L+E+MGL    +     D   +  +N Y   P+   + G++ HTD G +T+L  D+ VGGL+     G  ++ V P+ G  +VNLGD    + SNGR  N  H+     ++ R+SIATF   P + A+  P    + E P L  PIT+ +  K ++S +L+     +L +
Sbjct:  143 DYSRWPDKPEAWREVTKKYSDELMGLACKLLGVLSEAMGLDTEALTKACVDMDQKVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQ-VGGLQATRDDGKTWITVQPVEGAFVVNLGDHG-HLLSNGRFKNADHQAVVNSNSSRLSIATF-QNPAQEAIVYPLSVREGEKPILEAPITYTEMYKKKMSKDLELARLKKLAK 342          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.556e-17
Identity = 56/151 (37.09%), Postives = 83/151 (54.97%), Query Frame = 2
Query:  188 TIEKYAQAIQELALDLAHKLAESMGLMDSVFQDW----PCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAE 628
            T+EK+A   + LA  LA  LAE  G   S F++      C  R+N+Y   P+     G+  HTDS FLTIL  D+ VGGL+++ +   ++ V P P  L++N+GD+  Q WSNG   +V+HRV       R S A F+    +A +E  ++
Sbjct:  154 TMEKFASESEALAYMLAEVLAEKSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQ-VGGLQLI-KDNRWIAVKPNPKALIINIGDL-FQAWSNGMYKSVEHRVMTNPKVERFSTAYFMCPSYDAVIECSSD 301          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.693e-17
Identity = 63/203 (31.03%), Postives = 101/203 (49.75%), Query Frame = 2
Query:  146 DFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSG-AFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVR 739
            D+    D     R   E+Y++ +  LA  L   L+E+MGL    +     D   +  +N Y   P+   + G++ HTD G +T+L  D+ VGGL+     G +++ V P+ G  +VNLGD    + SNGR  N  H+     S  R+SIATF   P   A+  P +  + E   +  P+TF +  K ++ST+L+     +L +
Sbjct:  140 DYSRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAMGLEKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQ-VGGLQATRDGGESWITVKPVEGAFVVNLGDHGHYL-SNGRFKNADHQAVVNSSTSRLSIATF-QNPAPEAIVYPLKINEGEKSIMEEPMTFMEMYKKKMSTDLELARLKKLAK 339          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.436e-17
Identity = 60/195 (30.77%), Postives = 99/195 (50.77%), Query Frame = 2
Query:  191 IEKYAQAIQELALDLAHKLAESMGLMDSVFQDWPCQF------------RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAP-AEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELV 736
            I++Y   +++LA  L + +  S+G+     + W  +             R+N Y   PE   + G+  HTDS  LTIL    N GGL+V      +V V+P PG L+VN+GD+   + SNG++ +V HR +   +  R+SIA    GP      AP ++      P LY  IT+++Y +++     +A +A+ +V
Sbjct:  160 IQEYVDEMEKLASRLLYCILGSLGVTVEDIE-WAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQS-NTGGLQVFREESGWVTVEPAPGVLVVNIGDL-FHILSNGKIPSVVHRAKVNHTRSRISIAYLWGGPAGDVQIAPISKLTGPAEPSLYRSITWKEYLQIKYEVFDKAMDAIRVV 351          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.826e-16
Identity = 59/178 (33.15%), Postives = 94/178 (52.81%), Query Frame = 2
Query:  194 EKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSG-AFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQ 712
            +KY++ + ELA  L   L+E+MGL    +     D   +  +N Y   PE   + G++ HTD G +T+L  D+ VGGL+    +G  ++ V P+ G  +VNLGD      SNGR  N  H+     ++ R+SIATF   P   A+  P +  + E   +  PITF +  + ++S +L+
Sbjct:  161 QKYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQ-VGGLQATKDNGKTWITVQPVEGAFVVNLGDHG-HFLSNGRFKNADHQAVVNSNSSRLSIATF-QNPAPEAIVYPLKIREGEKSIMDEPITFAEMYRRKMSKDLE 335          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.820e-16
Identity = 61/196 (31.12%), Postives = 104/196 (53.06%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQ---FRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFV---DAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D     ++ ++++A  +++LA ++   L E++GL    +  VF          +++ Y   P+     G++ HTD+G L +L  D+ V GL V+ + G +V V P+  ++++NLGD   +V +NG+  +V HRV  +E   R+SIA+F   P   AV  PA  +   + E  +LY    F+DY KL +    QA E
Sbjct:  106 DLDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVL-KDGKWVDVPPMHHSIVINLGD-QLEVITNGKYKSVMHRVIAQEDGNRMSIASF-YNPGNDAVIYPAPALVEGEQEKTKLYPKFVFDDYMKLYVGLKFQAKE 298          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.221e-16
Identity = 80/236 (33.90%), Postives = 110/236 (46.61%), Query Frame = 2
Query:   17 LPLEIKRRNPYVIAG-SGYVAP-----TQKNPLYEAL--GLYDMASSQAVADFCSHL---DASPHQRETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFED 679
            LPL  KRR   V    SGY +        K P  E L  G +D A++  VAD+ S     D +P  R   +KY + ++EL+L +   L  S+G+        F D     R N Y   PE   + G   H D   LTIL  D+ VGGLEV+   G + PV P+PG +++N+GD      SNGR  +  HR    +   R S+A FL   ++  V  P     A  P+ Y   T+ D
Sbjct:  121 LPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGR-VYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLV-DGEWRPVSPVPGAMVINIGD-TFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPP---SAATPQHYPDFTWAD 349          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.221e-16
Identity = 80/236 (33.90%), Postives = 110/236 (46.61%), Query Frame = 2
Query:   17 LPLEIKRRNPYVIAG-SGYVAP-----TQKNPLYEAL--GLYDMASSQAVADFCSHL---DASPHQRETIEKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFED 679
            LPL  KRR   V    SGY +        K P  E L  G +D A++  VAD+ S     D +P  R   +KY + ++EL+L +   L  S+G+        F D     R N Y   PE   + G   H D   LTIL  D+ VGGLEV+   G + PV P+PG +++N+GD      SNGR  +  HR    +   R S+A FL   ++  V  P     A  P+ Y   T+ D
Sbjct:  121 LPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGR-VYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLV-DGEWRPVSPVPGAMVINIGD-TFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPP---SAATPQHYPDFTWAD 349          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.221e-16
Identity = 59/200 (29.50%), Postives = 106/200 (53.00%), Query Frame = 2
Query:  164 DASPHQRETIEKYAQAIQELALDLAHKLAESMGL-----MDSVFQDWPCQF--RINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATF-------LLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGE 721
            D     RE +  +A+ +++LA +L   L E++GL      ++ +      F  +++ Y   P+     G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  +++VNLGD   +V +NG+  +V HRV  ++   R+S+A+F       ++ P  A VE  AE    E+ ++Y    F+DY KL      QA E
Sbjct:  105 DLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGD-QLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAE----ENKQVYPKFVFDDYMKLYAGLKFQAKE 298          
BLAST of CB293419 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.074e-15
Identity = 59/187 (31.55%), Postives = 94/187 (50.27%), Query Frame = 2
Query:  194 EKYAQAIQELALDLAHKLAESMGL----MDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVM-DRSGAFVPVDPLPGTLLVNLGDIATQVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVR 739
            E+Y++ +  LA  L   L+E+MGL    + +   D   +  +N Y   P+   + G++ HTD G +T+L  D+ VGGL+   D    ++ V P+ G  +VNLGD      SNGR  N  H+     ++ R+SIATF   P   A   P +  + E   L  PITF +  K ++  +L+     +L +
Sbjct:  158 EEYSERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQ-VGGLQATRDNGKTWITVQPVEGAFVVNLGDHG-HFLSNGRFKNADHQAVVNSNSSRLSIATF-QNPAPDATVYPLKVREGEKAILEEPITFAEMYKRKMGRDLELARLKKLAK 341          
The following BLAST results are available for this feature:
BLAST of CB293419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
FL3H_MALDO8.784e-1831.53Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
G2OX8_ARATH2.556e-1737.09Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
FL3H_CALCH5.693e-1731.03Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
G3OX4_ARATH7.436e-1730.77Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
FL3H_PETHY2.826e-1633.15Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
ACCO3_CUCME4.820e-1631.121-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
GAOX2_ORYSJ8.221e-1633.90Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI8.221e-1633.90Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
ACCO1_PETHY8.221e-1629.501-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
FL3H_ARATH1.074e-1531.55Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06ac12_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ac12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293419 ID=CB293419; Name=CB293419; organism=Citrus sinensis; type=EST; length=793bp
GCCCCTTGAGGTGGATCTTCCTCTCGAGATCAAACGACGCAACCCCTATG
TGATCGCCGGCAGCGGCTACGTGGCTCCCACCCAGAAGAATCCTCTGTAT
GAAGCTTTGGGTCTCTACGACATGGCTTCCTCTCAAGCTGTTGCTGACTT
TTGTTCTCACCTGGATGCCTCTCCTCATCAGAGAGAGACAATAGAGAAAT
ATGCTCAAGCAATACAAGAGTTGGCCTTGGATTTGGCGCATAAATTGGCC
GAGAGTATGGGGTTGATGGACAGTGTGTTCCAGGATTGGCCTTGCCAGTT
TAGGATAAACAAGTACAACTTCGCTCCAGAAAGCGTAGGCTCCCCTGGAG
TGCAATTACACACAGATTCAGGGTTCCTTACTATTCTTCAAGATGATGAA
AATGTTGGTGGCCTCGAAGTGATGGACAGATCTGGTGCATTTGTACCTGT
TGATCCCTTGCCCGGCACCCTCCTTGTCAATCTTGGAGACATTGCCACGC
AGGTATGGAGTAACGGAAGGTTGCTCAATGTGAAGCATAGAGTGCAGTGC
AAGGAATCAGCAATAAGAGTATCGATTGCCACATTTCTATTGGGACCAAA
GGAGGCAGCAGTGGAAGCTCCAGCAGAGTTTGTTGATGCAGAACACCCAC
GTCTTTATGTACCAATTACTTTTGAAGACTACAGAAAGCTCCGACTGTCC
ACGAATTTGCAGGCGGGTGAAGCTCTTGAACTTGTACGTTCCCATTCCTG
AAACAATAGCCAAGAAAATTACATTGCATAGCTGACTGACATT
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