CB293498
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293498 vs. ExPASy Swiss-Prot
Match: TRXF_PEA (Thioredoxin F-type, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.125e-52 Identity = 101/123 (82.11%), Postives = 113/123 (91.87%), Query Frame = -3 Query: 112 TVRSSLEIAG--ATVGEVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAQKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKVVKEVTGAKLEDLVFAIDAVRSS 474 +VRSSLE AG TVG+VTEVNKDTFWPIV AAGDKTVVLDM+T+WCGPCKVIAP ++EL+QKY DV+FLKLDCNQ+NKSLAKELGI+VVPTFKILKDNK+VKEVTGAK +DLV AID VRSS Sbjct: 60 SVRSSLETAGPTVTVGKVTEVNKDTFWPIVNAAGDKTVVLDMFTKWCGPCKVIAPLYEELSQKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVTGAKFDDLVAAIDTVRSS 182
BLAST of CB293498 vs. ExPASy Swiss-Prot
Match: TRXF2_ARATH (Thioredoxin F-type 2, chloroplastic OS=Arabidopsis thaliana GN=At5g16400 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 5.584e-52 Identity = 98/123 (79.67%), Postives = 109/123 (88.62%), Query Frame = -3 Query: 115 GVFTVRSSLEIAGATVGEVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAQKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKVVKEVTGAKLEDLVFAIDAVRS 483 G VR SLE TVG+VTEV+KDTFWPIVKAAGDK VVLDMYTQWCGPCKVIAPK++EL++KY D++FLKLDCNQ+NK LAKELGIRVVPTFKILKDNKVVKEVTGAK EDL+ AI+A RS Sbjct: 62 GSCVVRCSLETVNVTVGQVTEVDKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAKYEDLLAAIEAARS 184
BLAST of CB293498 vs. ExPASy Swiss-Prot
Match: TRXF1_ARATH (Thioredoxin F-type 1, chloroplastic OS=Arabidopsis thaliana GN=At3g02730 PE=1 SV=2) HSP 1 Score: 194.512 bits (493), Expect = 3.388e-49 Identity = 93/125 (74.40%), Postives = 107/125 (85.60%), Query Frame = -3 Query: 112 GGVFTVRSSLEIAGATVGEVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAQKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKVVKEVTGAKLEDLVFAIDAVRSS 486 G VR SLE +VG+VTEV+KDTFWPIVKAAG+K VVLDMYTQWCGPCKVIAPK++ L++KY DV+FLKLDCN +N+ LAKELGIRVVPTFKILKDNKVVKEVTGAK +DLV AI+ RS+ Sbjct: 51 GDSSVVRCSLETVNVSVGQVTEVDKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAKYDDLVAAIETARSA 175
BLAST of CB293498 vs. ExPASy Swiss-Prot
Match: TRXF_BRANA (Thioredoxin F-type, chloroplastic OS=Brassica napus GN=TRXF PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 9.857e-49 Identity = 92/125 (73.60%), Postives = 107/125 (85.60%), Query Frame = -3 Query: 112 GGVFTVRSSLEIAGATVGEVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAQKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKVVKEVTGAKLEDLVFAIDAVRSS 486 G VR SL+ +VG+VTEV+KDTFWPIVKAAG+K VVLDMYTQWCGPCKVIAPK++ L++KY DV+FLKLDCN EN+ LAKELGIRVVPTFKILKDN+VVKEVTGAK +DLV AI+ RS+ Sbjct: 54 GDSSVVRCSLQTVNVSVGQVTEVDKDTFWPIVKAAGEKIVVLDMYTQWCGPCKVIAPKYKALSEKYEDVVFLKLDCNPENRPLAKELGIRVVPTFKILKDNQVVKEVTGAKYDDLVAAIETARSA 178
BLAST of CB293498 vs. ExPASy Swiss-Prot
Match: TRXF_SPIOL (Thioredoxin F-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 2.428e-47 Identity = 96/139 (69.06%), Postives = 114/139 (82.01%), Query Frame = -3 Query: 112 KKSNKQLNGGVFTVRSSLEIAGAT------VGEVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAQKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKVVKEVTGAKLEDLVFAIDAVRSS 510 +K +++ GG VR+S+E A T VG+VTEVNKDTFWPIVKAAGDK VVLDM+TQWCGPCK +APK+++LA++Y DVIFLKLDCNQENK+LAKELGIRVVPTFKILK+N VV EVTGAK + L+ AI A RSS Sbjct: 54 RKDRRRMRGG--EVRASMEQALGTQEMEAIVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARSS 190
BLAST of CB293498 vs. ExPASy Swiss-Prot
Match: TRXF_MESCR (Thioredoxin F-type, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.332e-45 Identity = 94/133 (70.68%), Postives = 108/133 (81.20%), Query Frame = -3 Query: 112 QLNGGVFTVRSSLEIA-GAT----VGEVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAQKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKVVKEVTGAKLEDLVFAIDAVRSS 495 +++G V++SLE A GA VG+VTEV+KDTFWPI AGDK VVLDMYTQWCGPCKV+APK+QELA+K DV+FLKLDCNQENK LAKELGIRVVPTFKILK K+V EVTGAK + LV AI+A RSS Sbjct: 59 RMSGRSCCVKASLETAVGAESETLVGKVTEVDKDTFWPIANGAGDKPVVLDMYTQWCGPCKVMAPKYQELAEKLLDVVFLKLDCNQENKPLAKELGIRVVPTFKILKGGKIVDEVTGAKFDKLVAAIEAARSS 191
BLAST of CB293498 vs. ExPASy Swiss-Prot
Match: THIO_CALJA (Thioredoxin OS=Callithrix jacchus GN=TXN PE=3 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 6.448e-16 Identity = 41/97 (42.27%), Postives = 62/97 (63.92%), Query Frame = -3 Query: 127 NKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAQKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKVVKEVTGAKLEDLVFAID 417 +KD F + AAGDK VV+D WCGPCK+I P F L++KYS+V+FL++D + + + +A E ++ +PTF+ K + V E +GA E L I+ Sbjct: 7 SKDAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVD-DCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATIN 102
BLAST of CB293498 vs. ExPASy Swiss-Prot
Match: THIO_HUMAN (Thioredoxin OS=Homo sapiens GN=TXN PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 3.200e-15 Identity = 41/97 (42.27%), Postives = 61/97 (62.89%), Query Frame = -3 Query: 127 NKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAQKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKVVKEVTGAKLEDLVFAID 417 +K F + AAGDK VV+D WCGPCK+I P F L++KYS+VIFL++D + + + +A E ++ +PTF+ K + V E +GA E L I+ Sbjct: 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVD-DCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATIN 102
BLAST of CB293498 vs. ExPASy Swiss-Prot
Match: THIO_RABIT (Thioredoxin OS=Oryctolagus cuniculus GN=TXN PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.216e-14 Identity = 37/97 (38.14%), Postives = 62/97 (63.92%), Query Frame = -3 Query: 127 NKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAQKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKVVKEVTGAKLEDLVFAID 417 +K F ++ +AGDK VV+D WCGPCK+I P F L++K+++V+F+++D + + K +A E ++ +PTF+ K + V E +GA E L I+ Sbjct: 7 SKSAFQEVLDSAGDKLVVVDFSATWCGPCKMIKPFFHALSEKFNNVVFIEVDVD-DCKDIAAECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATIN 102
BLAST of CB293498 vs. ExPASy Swiss-Prot
Match: THIO_MOUSE (Thioredoxin OS=Mus musculus GN=Txn PE=1 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 1.588e-14 Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = -3 Query: 130 NKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVIAPKFQELAQKYSDVIFLKLDCNQENKSLAKELGIRVVPTFKILKDNKVVKEVTGAKLEDLVFAI 417 +K+ F + AAGDK VV+D WCGPCK+I P F L KYS+V+FL++D + + + +A + ++ +PTF+ K + V E +GA E L +I Sbjct: 7 SKEAFQEALAAAGDKLVVVDFSATWCGPCKMIKPFFHSLCDKYSNVVFLEVDVD-DCQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEASI 101 The following BLAST results are available for this feature:
BLAST of CB293498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293498 ID=CB293498; Name=CB293498; organism=Citrus sinensis; type=EST; length=599bpback to top |