CB293547

Overview
NameCB293547
Unique NameCB293547
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293547 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 6.783e-53
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = -3
Query:  237 SIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 533
            SIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Sbjct:  396 SIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of CB293547 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.861e-40
Identity = 74/99 (74.75%), Postives = 86/99 (86.87%), Query Frame = -3
Query:  237 SIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 533
            S++L+GKLLFGIEK PE+LN VRPAG  LVDDW CLK++VRTFE+HCG+LSQYGMKHMRS AN+CN GI KE+M EASAQAC  IP+ PWSSL +GFSA
Sbjct:  386 SVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of CB293547 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.502e-39
Identity = 74/99 (74.75%), Postives = 86/99 (86.87%), Query Frame = -3
Query:  237 SIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 533
            S+KLIG+LLFGIEKG E+L+ VRPAG PLVD+W CLK++V+TFE+HCG+LSQYGMKHMRS ANICN GI  E MAEASAQAC +IP+ PWSSL  GFSA
Sbjct:  395 SVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of CB293547 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 8.050e-38
Identity = 69/99 (69.70%), Postives = 84/99 (84.85%), Query Frame = -3
Query:  237 SIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 533
            S+ L+GK+LFGI +GPE+LN VR AGQPLVDDW CLK+ VR FE HCG+LSQYG+KHMRS ANICN GI  E+M EA++QAC  +P+GPWSSL++GFSA
Sbjct:  396 SVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of CB293547 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 8.330e-35
Identity = 69/99 (69.70%), Postives = 81/99 (81.82%), Query Frame = -3
Query:  237 SIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 533
            SI LIG LLFG+E G  +LN VRP+G+PLVDDW CLKSLVR FE HCG+LSQYG+KHMRS+AN+CN GI   +M EA+ QAC  IP+ PWSSLD+GFSA
Sbjct:  381 SILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of CB293547 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.870e-27
Identity = 56/99 (56.57%), Postives = 70/99 (70.71%), Query Frame = -3
Query:  237 SIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 533
            S++LIG LLFG +K   IL +VR  G PLVDDWGCLKS+VR FE+ CG+L+QYGMKHMR+ ANICN G+    M EA   AC    +G W   ++G+SA
Sbjct:  399 SMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of CB293547 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.748e-27
Identity = 55/100 (55.00%), Postives = 72/100 (72.00%), Query Frame = -3
Query:  237 GSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 536
            GS++LIG LL+G  KG  +L +VR  G  LVDDW CLKS+VR FE+HCG L+QYGMKHMR+ ANICN+G+ +  M EA   ACE   +G +   ++G+SA
Sbjct:  396 GSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of CB293547 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.412e-26
Identity = 53/100 (53.00%), Postives = 71/100 (71.00%), Query Frame = -3
Query:  237 GSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 536
            GS++LIG LL+G EK   +L +VR  G PLVDDW CLKS+VR +E+HCG+L+QYGMKHMR+ ANICN+G+ +  M +A   AC    +G     + G+SA
Sbjct:  394 GSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of CB293547 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.231e-26
Identity = 53/100 (53.00%), Postives = 70/100 (70.00%), Query Frame = -3
Query:  237 GSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 536
            GS++LIG LL+G  K   +L++VR  G PLVDDW CLKS+VR FE+HCG+L+QYGMKHMR+  N+CN+G+ K  M EA   AC    +G     + G+SA
Sbjct:  376 GSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
BLAST of CB293547 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 3.283e-23
Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = -3
Query:  288 SIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 533
            S++LI  +LFG      +LN VR  G PLVDDW CLKS+VR FE HCG+L+QYGMKHMR+ AN+CN G+ KE M EAS  AC
Sbjct:  388 SVELIATILFGPTMN--VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
The following BLAST results are available for this feature:
BLAST of CB293547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI6.783e-53100.00Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU3.861e-4074.75Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_VICSA2.502e-3974.75Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEG_ARATH8.050e-3869.70Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPEA_ARATH8.330e-3569.70Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO2.870e-2756.57Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN3.748e-2755.00Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU5.412e-2653.00Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
LEGU_CANEN9.231e-2653.00Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPEB_ARATH3.283e-2360.98Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_06bb07_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06bb07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293547 ID=CB293547; Name=CB293547; organism=Citrus sinensis; type=EST; length=541bp
ATCGCATACCCACTAAAGATATACTATNAAATTACAACTGCGGTCTGGCC
CCCTAAAACTTTTAAATATAATAATTACAAGGAAGCAATCACCAGCCAAA
TGAAAATAGACATTGCCATAAATGGCAGCAATCATCAGCCAAATGAAAAT
AGATATTGCCATATTGGCGACTATAATGAAAACTAACATATTTCAAGAAC
TGGCTTATGATATTCGCACAGTTCTCGGCTTCTTTATGCACTGAATCCTT
TGTCGAGAGAACTCCAAGGACCAGAAGGAATATTTTCACAGGCTTGTGCT
GATGCTTCCGCCATCTTCTCTTTCCCAATTCCTGTATTACAGATGTTTGC
AAGAGAACGCATGTGCTTCATTCCATATTGCGATAAAGCTCCACAGTGCG
ACTCAAAAGTCCTCACCAGTGATTTGAGGCAGCCCCAGTCATCAACAAGA
GGCTGACCAGCAGGTCGAACAGTGTTCAAGATCTCTGGACCTTTCTCAAT
TCCAAATAAGAGCTTTCCAATAAGTTTGATGCTGCCTCGTG
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