CB293558

Overview
NameCB293558
Unique NameCB293558
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: KSG7_ARATH (Shaggy-related protein kinase eta OS=Arabidopsis thaliana GN=ASK7 PE=1 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 2.834e-65
Identity = 127/155 (81.94%), Postives = 136/155 (87.74%), Query Frame = -2
Query:    3 MADDKEMSAAVVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKH*QQCKSENAPHICERLYVPD-FQGPGY 464
            MADDKEM AAVVDG D VTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNV+ LKHCFFSTTSK+ELFLNLVMEYVPES+YRVLKH     ++  P +  +LY+   F+G  Y
Sbjct:    1 MADDKEMPAAVVDGHDQVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVVCLKHCFFSTTSKDELFLNLVMEYVPESLYRVLKH-YSSANQRMPLVYVKLYMYQIFRGLAY 154          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 6.534e-62
Identity = 119/153 (77.78%), Postives = 135/153 (88.24%), Query Frame = -2
Query:    3 DDKEMSAAVVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKH*QQCKSENAPHICERLYVPD-FQGPGY 458
            +DKEMSAAV++G+D VTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGE+VAIKKVLQDRRYKNRELQLMR+MDHPNV+SLKHCFFSTT+++ELFLNLVMEYVPE++YRVLKH     ++  P    +LY    F+G  Y
Sbjct:   35 NDKEMSAAVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRLMDHPNVVSLKHCFFSTTTRDELFLNLVMEYVPETLYRVLKH-YTSSNQRMPIFYVKLYTYQIFRGLAY 186          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: KSG9_ARATH (Shaggy-related protein kinase iota OS=Arabidopsis thaliana GN=ASK9 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.456e-61
Identity = 120/152 (78.95%), Postives = 133/152 (87.50%), Query Frame = -2
Query:    3 DKEMSAAVVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKH*QQCKSENAPHICERLYVPD-FQGPGY 455
            DKEMSAAV++G+D VTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGE+VAIKKVLQDRRYKNRELQLMR MDHPNVISLKHCFFSTTS++ELFLNLVMEYVPE++YRVL+H     ++  P    +LY    F+G  Y
Sbjct:   34 DKEMSAAVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQLMRPMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETLYRVLRH-YTSSNQRMPIFYVKLYTYQIFRGLAY 184          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.175e-57
Identity = 109/143 (76.22%), Postives = 125/143 (87.41%), Query Frame = -2
Query:   30 DDKEMSAAVVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKH*QQCKSENAPHICERLY 458
            DDKEM AAVVDG+   TGHII TTIGGKNG+PKQTISYMAER+VG GSFGIVFQAKCLETGETVAIKKVLQD+RYKNRELQ MR++DHPNV+SLKHCFFSTT K+EL+LNLV+EYVPE++YRV KH  +  ++  P I  +LY
Sbjct:   37 DDKEMEAAVVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERIVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVYRVSKHYSRA-NQRMPIIYVKLY 178          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: KSG1_ARATH (Shaggy-related protein kinase alpha OS=Arabidopsis thaliana GN=ASK1 PE=2 SV=3)

HSP 1 Score: 219.164 bits (557), Expect = 1.410e-56
Identity = 107/143 (74.83%), Postives = 125/143 (87.41%), Query Frame = -2
Query:   30 DDKEMSAAVVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKH*QQCKSENAPHICERLY 458
            DDKEM A VVDG+   TGHII TTIGG+NG+PKQTISYMAERVVG GSFG+VFQAKCLETGETVAIKKVLQDRRYKNRELQ MR++DHPNV+SLKHCFFSTT K+EL+LNLV+EYVPE+++RV+KH  +  ++  P I  +LY
Sbjct:   32 DDKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKL-NQRMPLIYVKLY 173          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: MSK1_MEDSA (Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa GN=MSK-1 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.357e-56
Identity = 105/143 (73.43%), Postives = 125/143 (87.41%), Query Frame = -2
Query:   30 DDKEMSAAVVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKH*QQCKSENAPHICERLY 458
            DD+EM A VVDG+   TGHII TTIGG+NG+PKQTISYMAERVVG GSFG+VFQAKCLETGETVAIKKVLQD+RYKNRELQ MR++DHPNV+SLKHCFFSTT K+EL+LNLV+EYVPE+++RV+KH  +  ++  P I  +LY
Sbjct:   38 DDREMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYSKL-NQRMPMIYVKLY 179          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: KSG3_ARATH (Shaggy-related protein kinase gamma OS=Arabidopsis thaliana GN=ASK3 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.559e-55
Identity = 104/143 (72.73%), Postives = 125/143 (87.41%), Query Frame = -2
Query:   30 DDKEMSAAVVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKH*QQCKSENAPHICERLY 458
            DDKEM A +V+G+   TGHII TTIGG+NG+PKQTISYMAERVVG GSFG+VFQAKCLETGETVAIKKVLQDRRYKNRELQ MR++DHPNV+SLKHCFFSTT K+EL+LNLV+EYVPE+++RV+KH  +  ++  P +  +LY
Sbjct:   36 DDKEMEATIVNGNVTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKL-NQRMPLVYVKLY 177          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: MSK3_MEDSA (Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 7.736e-55
Identity = 106/144 (73.61%), Postives = 125/144 (86.81%), Query Frame = -2
Query:   30 DDKEMSAA-VVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKH*QQCKSENAPHICERLY 458
            DDKEM AA +VDG+   TGHII TTIGGKNG+PKQTISYMAERVVG GSFG+VFQAKCLETGETVAIKKVLQD+RYKNRELQ MR++DHPNV+SLKHCFFSTT K+EL+LNLV+EYVPE++ RV++H  +  ++  P I  +LY
Sbjct:   36 DDKEMEAATIVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVSRVIRHYNK-MNQRMPMIYVKLY 178          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: MSK1_TOBAC (Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.010e-54
Identity = 101/143 (70.63%), Postives = 125/143 (87.41%), Query Frame = -2
Query:   30 DDKEMSAAVVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKH*QQCKSENAPHICERLY 458
            DDKE+ AA+VDG+   TGHII TTIGG++G+PKQTISYMAER+VG GSFG+VFQAKCLETGETVAIKKVLQD+RYKNRELQ MR++DHPNV+ LKHCFFSTT K+E++LNLV+EYVPE+++RV+KH  +  ++  P I  +LY
Sbjct:   36 DDKEIEAAIVDGNGTETGHIIVTTIGGRHGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVCLKHCFFSTTEKDEVYLNLVLEYVPETVHRVIKHYNKL-NQRMPLILVKLY 177          
BLAST of CB293558 vs. ExPASy Swiss-Prot
Match: MSK2_MEDSA (Glycogen synthase kinase-3 homolog MsK-2 OS=Medicago sativa GN=MSK-2 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 2.940e-54
Identity = 101/143 (70.63%), Postives = 123/143 (86.01%), Query Frame = -2
Query:   30 DDKEMSAAVVDGSDHVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRVMDHPNVISLKHCFFSTTSKNELFLNLVMEYVPESMYRVLKH*QQCKSENAPHICERLY 458
            DDKEM A VVDG+    GH+I TTIGGKNG+PKQTISYMAER VG GSFG+VFQAKCLETGETVAIKKVLQD+RYKNRELQ MR++DHPNV++LKHCFFSTT K+EL+LNLV+E+VPE+++RV++H  +  ++  P I  +LY
Sbjct:   37 DDKEMEAHVVDGNSTEAGHVIVTTIGGKNGQPKQTISYMAERAVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVTLKHCFFSTTEKDELYLNLVLEFVPETVHRVIRHYSK-MNQRMPLIYVKLY 178          
The following BLAST results are available for this feature:
BLAST of CB293558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
KSG7_ARATH2.834e-6581.94Shaggy-related protein kinase eta OS=Arabidopsis t... [more]
KSG6_ARATH6.534e-6277.78Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]
KSG9_ARATH1.456e-6178.95Shaggy-related protein kinase iota OS=Arabidopsis ... [more]
KSG5_ARATH2.175e-5776.22Shaggy-related protein kinase epsilon OS=Arabidops... [more]
KSG1_ARATH1.410e-5674.83Shaggy-related protein kinase alpha OS=Arabidopsis... [more]
MSK1_MEDSA5.357e-5673.43Glycogen synthase kinase-3 homolog MsK-1 OS=Medica... [more]
KSG3_ARATH1.559e-5572.73Shaggy-related protein kinase gamma OS=Arabidopsis... [more]
MSK3_MEDSA7.736e-5573.61Glycogen synthase kinase-3 homolog MsK-3 OS=Medica... [more]
MSK1_TOBAC1.010e-5470.63Shaggy-related protein kinase NtK-1 OS=Nicotiana t... [more]
MSK2_MEDSA2.940e-5470.63Glycogen synthase kinase-3 homolog MsK-2 OS=Medica... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_06bc02_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06bc02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293558 ID=CB293558; Name=CB293558; organism=Citrus sinensis; type=EST; length=630bp
ATGTAGCCAGGCCCCTGAAAATCTGGTACGTATAACCTTTCACATATATG
AGGGGCATTCTCTGATTTGCACTGCTGCTAATGCTTCAAAACCCTATACA
TGCTCTCTGGTACGTATTCCATAACCAAGTTGAGGAAAAGTTCGTTTTTA
CTGGTAGTTGAAAAGAAACAATGCTTCAAAGAAATCACATTTGGATGATC
CATCACCCGCATTAACTGCAGTTCACGATTCTTATATCTTCTGTCCTGCA
AAACCTTCTTGATAGCCACAGTCTCTCCAGTTTCCAAGCATTTAGCCTGG
AAGACAATACCAAATGACCCAGTTCCCACAACACGCTCCGCCATGTAGCT
AATAGTCTGTTTTGGCTCTCCATTTTTGCCTCCAATGGTGGTGGAAATGA
TGTGACCAGTGACATGGTCACTCCCATCAACAACAGCAGCAGACATCTCC
TTATCGTCGGCCATGGGGAGATTTGGAGAGAAATTGGGGTGAAGAAAGAG
AGGGAGGGAGAGAGAGAGAGAGAGAGAGCGATGGAAGAGAAATGGAGAAA
TTTCAACGGTGGATGAGGGAGAAGATGATGATCATGGTGTGGCGATGGAG
AATGAGAGAAAGGAGGACCCAAGCCTCGTG
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