CB293612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB293612 vs. ExPASy Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.773e-27 Identity = 83/252 (32.94%), Postives = 122/252 (48.41%), Query Frame = 2 Query: 62 VKRCFSYCAVFPKDYSMDKEELITLWMAQGYFNAKEDQEMEMIGEEYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVSRKECLWLEIDGNKESVINSFGDKVRHXXXXXXXXXXXXAPLPMSIHGLNRLRTILIYDKXXXXXXXXXXILPGLFSKLAGLRALVIGIRQSSPFSHPYQYSITEIPENVGKLIHLKYLNLSKLCIERLPETLCELYNLQELDIRGCVNLRELPAGIGKLMNMRSLL 817 +K+CF+YCAVFPKD M+KE+LI+LWMA G+ +K + E+E +G+E + L RSFFQEIE + F KMHD++HD A + N+ +R ++ H + +I LP L K LR L +G + ++P ++G L+HL+YLNL + LP+ LC+L NLQ LD++ C L LP KL ++R+LL Sbjct: 403 LKQCFAYCAVFPKDAKMEKEKLISLWMAHGFLLSKGNMELEDVGDEVWKELYLRSFFQEIEVKDGKTYF---KMHDLIHDLATSLFS---------------ANTSSSNIRE----------------INKHSYTHMMSI------GFAEVVFFYTLPPL-EKFISLRVLNLG-----------DSTFNKLPSSIGDLVHLRYLNLYGSGMRSLPKQLCKLQNLQTLDLQYCTKLCCLPKETSKLGSLRNLL 602
BLAST of CB293612 vs. ExPASy Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.434e-26 Identity = 86/256 (33.59%), Postives = 122/256 (47.66%), Query Frame = 2 Query: 62 VKRCFSYCAVFPKDYSMDKEELITLWMAQGYFNAKEDQEMEMIGEEYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFV---SRKECLWLEIDGNKESVINSFGDKVRHXXXXXXXXXXXXAPLPMSIHGLNRLRTILIYDKXXXXXXXXXXILPGLFSKLAGLRALVIGIRQSSPFSHPYQYSITEIPENVGKLIHLKYLNLS-KLCIERLPETLCELYNLQELDIRGCVNLRELPAGIGKLMNMRSLL 817 +++CF YCAVFPKD M KE LI WMA G+ +K + E+E +G E +N L RSFFQEIE + F KMHD++HD A + + EI+ N + + S G A + S P L K LR V+ +R S ++ ++P ++G L+HL+YL+LS I LP+ LC+L NLQ LD+ C +L LP KL ++R+LL Sbjct: 402 LRQCFVYCAVFPKDTKMAKENLIAFWMAHGFLLSKGNLELEDVGNEVWNELYLRSFFQEIEVESGKTYF---KMHDLIHDLATSLFSANTSSSNIREINANYDGYMMSIG----------------FAEVVSSYS-------------------------PSLLQKFVSLR--VLNLRNS---------NLNQLPSSIGDLVHLRYLDLSGNFRIRNLPKRLCKLQNLQTLDLHYCDSLSCLPKQTSKLGSLRNLL 602
BLAST of CB293612 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.445e-26 Identity = 85/259 (32.82%), Postives = 130/259 (50.19%), Query Frame = 2 Query: 62 VKRCFSYCAVFPKDYSMDKEELITLWMAQGYFNAKEDQEMEMIGEEYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHD-----FAQFVSRKECLWLEIDGNKES--VINSFGDKVRHXXXXXXXXXXXXAPLPMSIHGLNRLRTILIYDKXXXXXXXXXXILPGLFSKLAGLRALVIGIRQSSPFSHPYQYSITEIPENVGKLIHLKYLNLSKLCIERLPETLCELYNLQELDIRGCVNLRELPAGIGKLMNMRSLL 817 +++CF+YCAVFPKD ++KE LI LWMA + +K + E+E +G E +N L RSFFQEIE F KMHD++HD F+ S + + + +++ ++ ++ D MSI G + + + Y P LF + LR L + +S F ++P +VG L+HL+YL+LS I LP+ LC+L NLQ LD+ C +L LP KL ++R+L+ Sbjct: 402 LRQCFAYCAVFPKDTKIEKEYLIALWMAHSFLLSKGNMELEDVGNEVWNELYLRSFFQEIEVKSGKTYF---KMHDLIHDLATSMFSASASSRSIRQINVKDDEDMMFIVTNYKDM-------------------MSI-GFSEV--VSSYS-------------PSLFKRFVSLRVLNL---SNSEFE--------QLPSSVGDLVHLRYLDLSGNKICSLPKRLCKLQNLQTLDLYNCQSLSCLPKQTSKLCSLRNLV 611
BLAST of CB293612 vs. ExPASy Swiss-Prot
Match: DRL21_ARATH (Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.214e-25 Identity = 87/254 (34.25%), Postives = 124/254 (48.82%), Query Frame = 2 Query: 62 VKRCFSYCAVFPKDYSMDKEELITLWMAQGY-FNAKEDQEMEMIGEEYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVSRKECLWLEIDGNKESVINSFGDKVRHXXXXXXXXXXXXAPLPMSIHGLNRLRTILIYDKXXXXXXXXXX--ILPGLFSKLAGLRALVIGIRQSSPFSHPYQYSITEIPENVGKLIHLKYLNLSKLCIERLPETLCELYNLQELDIRGCVNLRELPAGIGKLMNMRSL 814 +KRCF+ C++FPK + D+EEL+ LWMA + + + +E IG +Y L +SFFQ + D MHD+++D A+ VS C LE D I RH A SI G LRTIL ++ +L L + L+GLR L + SH Y IT +P+++ L L+YL+LS I+ LPE +C L NLQ L + C +L LP I +L+N+R L Sbjct: 418 LKRCFALCSIFPKGHVFDREELVLLWMAIDLLYQPRSSRRLEDIGNDYLGDLVAQSFFQRL-----DITMTSFVMHDLMNDLAKAVSGDFCFRLEDDN-----IPEIPSTTRHFSFSRSQCDASVAF--RSICGAEFLRTILPFNSPTSLESLQLTEKVLNPLLNALSGLRILSL--------SH---YQITNLPKSLKGLKLLRYLDLSSTKIKELPEFVCTLCNLQTLLLSNCRDLTSLPKSIAELINLRLL 648
BLAST of CB293612 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.938e-23 Identity = 78/258 (30.23%), Postives = 129/258 (50.00%), Query Frame = 2 Query: 62 VKRCFSYCAVFPKDYSMDKEELITLWMAQGYF-NAKEDQEMEMIGEEYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVSRKECLWLEIDGNKESVINSFGDKVRHXXXXXXXXXXXXAPLPMSIHGLNRLRTILIYDKXXXXXXXXXXILPGLFSK-----LAGLRALVIGIRQSSPFSHPYQYSITEIPENVGKLI-HLKYLNLSKLCIERLPETLCELYNLQELDIRGCVNLRELPAGIGKLMNMRSL 814 +KRCF+YC++FPK ++ +K++++ LWMA+G+ + + +E +G EYF+ L +RS Q+ + R MHD +++ AQF S + E DG K V ++ R+ PM L ++ + + L + S+ L LR L + SH Y I +P + K I H ++L+LS+ +E+LP++LC +YNLQ L + C +L+ELP I L+N+R L Sbjct: 426 LKRCFAYCSIFPKGHAFEKDKVVLLWMAEGFLQQTRSSKNLEELGNEYFSELESRSLLQKTK--------TRYIMHDFINELAQFASGEFSSKFE-DGCKLQV----SERTRYLSYLRDNYAE-----PMEFEALREVKFLRTFLPLSLTNSSRSCCLDQMVSEKLLPTLTRLRVLSL--------SH---YKIARLPPDFFKNISHARFLDLSRTELEKLPKSLCYMYNLQTLLLSYCSSLKELPTDISNLINLRYL 654
BLAST of CB293612 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.132e-18 Identity = 80/258 (31.01%), Postives = 117/258 (45.35%), Query Frame = 2 Query: 62 VKRCFSYCAVFPKDYSMDKEELITLWMAQGYFNAKEDQEMEMIGEEYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQ--FVSRKEC---LWLEIDGNKESVINSFGDKVRHXXXXXXXXXXXXAPLPMSIHGLNRLRTI-LIYDKXXXXXXXXXXILPGLFSKLAGLRALVIGIRQSSPFSHPYQYSITEIPENVGKLIHLKYLNLSK-LCIERLPETLCELYNLQELDIRGCVNLRELPAGIGKLMNMRSL 814 +++CF+YCAVFPKD M KE LITLWMA G+ +K + E+E +G E +N L RSFFQEIE + F K+HD++HD A F + C + + K +V F V P + LR + L Y K LP L LR L + + +PE + KL +L+ L++ + LP+ +L +L+ L + GC L P IG L +++L Sbjct: 404 LRQCFAYCAVFPKDTKMIKENLITLWMAHGFLLSKGNLELEDVGNEVWNELYLRSFFQEIEAKSGNTYF---KIHDLIHDLATSLFSASASCGNIREINVKDYKHTVSIGFAAVVSSYS-------------PSLLKKFVSLRVLNLSYSKLEQ--------LPSSIGDLLHLRYLDLSCN-----------NFRSLPERLCKLQNLQTLDVHNCYSLNCLPKQTSKLSSLRHLVVDGC-PLTSTPPRIGLLTCLKTL 625
BLAST of CB293612 vs. ExPASy Swiss-Prot
Match: R13L2_ARATH (Putative disease resistance RPP13-like protein 2 OS=Arabidopsis thaliana GN=RPP13L2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.248e-14 Identity = 63/251 (25.10%), Postives = 105/251 (41.83%), Query Frame = 2 Query: 62 VKRCFSYCAVFPKDYSMDKEELITLWMAQGYFNAKEDQEMEMIGEEYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVSRKECLWLEIDGNKESVINSFGDKVRHXXXXXXXXXXXXAPLPMSIHGLNRLRTILIYDKXXXXXXXXXXILPGLFSKLAGLRALVIGIRQSSPFSHPYQYSITEIPENVGKLIHLKYLNLSKLCIERLPETLCELYNLQELDIRGCVNLRELPAGIGKLMNMRSL 814 +K CF Y +VFP+DY +D E+LI L +A+G+ E+ ME + Y L S + +++ + M ++HD+V +F KE ++ + + S S + V H S + R + Y + +L L GL + G YS +P+ +G L+HL+YL ++ + LP+ + L LQ LD G N E + L ++R L Sbjct: 410 LKLCFLYLSVFPEDYEVDVEKLIQLLVAEGFIQEDEEMTMEDVARYYIEDLVYISLVEVVKRKK--GKLMSFRIHDLVREFT-IKKSKELNFVNVYDEQHSSTTSRREVVHHLMDDNYLCDRRVNTQMRSFLFFGKRRNDITYVETITLKLKLLRVL-----NLGGLHFICQG------------YSPWSLPDVIGGLVHLRYLGIADTVVNNLPDFISNLRFLQTLDASG--NSFERMTDLSNLTSLRHL 638 The following BLAST results are available for this feature:
BLAST of CB293612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB293612 ID=CB293612; Name=CB293612; organism=Citrus sinensis; type=EST; length=820bpback to top |