CB293709

Overview
NameCB293709
Unique NameCB293709
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB293709 vs. ExPASy Swiss-Prot
Match: CID2_ARATH (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana GN=CID2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = -3 
Query:  489 AMVDDRRSRLNPNAPIFIPNAAFGEVEDFSPEWWDLVKTSPLFRDYWLSQHQEDDF 656
            A +D R S LNPNAP+F P   F EVEDFSP+WWDLV TS  FRD+WLS + E++F
Sbjct:    3 ATIDRRLSTLNPNAPVFDP-VEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEF 57
The following BLAST results are available for this feature:
BLAST of CB293709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CID2_ARATH1.931e-1362.50Polyadenylate-binding protein-interacting protein ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_06cb10_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06cb10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293709 ID=CB293709; Name=CB293709; organism=Citrus sinensis; type=EST; length=730bp
TTTTTTCCATAGATTAAAGCATTTACAAAGGTTTCACTGAACTCGGTTAA
AACTATACAGGGAAAGAGATGAAAATGAACCATACAACACAAATGCAGAT
ACAAAACTTGTTTGGAGACATGCAACTAGCTACAAGGTCAATATTACAAT
AAAAACGCTTCAGTCTGAAATTTCCTTCAACGAGGCTGATGAATGCCCCC
CATGGGGGTGACTTTTGGGCCCATCACACACTTATTAGCCAGCTTCTTCC
CACAATACTTGGCAGATCCCACTGGAGACTTCGGCCCTCGCTCCTTCAAA
GGTTTTGATAAATTCAAGTTCTTTAACAAAGCCTTTGCATCCACTCCATT
CCCAGTGCCATCGAGAAGCACTCTTCCTTTCTCGAAATCTGATAAATTTT
TTTCTTTAGATTCTACAGACAGATCAGCGCCGACAATATCAGGAAACTCA
TCCAAATCCCAGTAATCGTAATCGTCCAAACTGCTGGTAAAATCATCTTC
TTGATGCTGACTCAGCCAATAATCACGGAACAGCGGCGAAGTCTTCACAA
GGTCCCACCATTCCGGCGAAAAATCCTCCACTTCACCAAACGCAGCGTTC
GGAATAAATATCGGCGCATTCGGATTCAATCGTGACCTTCGATCATCCAC
CATCGCCATCGCTTCTCAAAACTCGTGGGCGTTGATTCTTCTGTTCAGTT
CAGTCACGAACAGTCCACCGTGCCCTCGTG
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