CB293749

Overview
NameCB293749
Unique NameCB293749
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB293749 vs. ExPASy Swiss-Prot
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.500e-12
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 2 
Query:  431 SNRRCERKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVADDMATD 679
            + ++   K+G  WT+EEH  FL G+Q  GKG W+ IA+ +V +RTPTQ+ SHAQKY++RQ   T+ KR  S+ D+   D+  D
Sbjct:  369 TGKKTSLKQG--WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNKR--SIHDLSLQDLIDD 446
The following BLAST results are available for this feature:
BLAST of CB293749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MYBJ_DICDI3.500e-1245.78Myb-like protein J OS=Dictyostelium discoideum GN=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_06ce01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ce01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293749 ID=CB293749; Name=CB293749; organism=Citrus sinensis; type=EST; length=712bp
GCCGTAGGATCACACGCACACCCTCTCTACCCCCTCAAAATTTCCAAGAT
AATTATAATTTAAATAGTCAATTTAATTAATTTATTAGAGATATCCGAAT
TTTATCGAGTCGCGGCAGCGGTAACCGGCGATGACGCGGCGCTGCTCGCA
TTGCAGCAACAACGGGCACAACTCGCGAACGTGTCCCACGCGGGGCGGCG
GCTCGTCGCCGGGCGTGGGCGGCCTGAAGTTGTTTGGCGTCCGGCTTACG
GATGGCTCGATAATCAAGAAGAGCGCGAGCATGGGGAACTTATCGGCGTT
GCACTACCATAGCTCCTCGTCGGCAGCCGCTTCGCCGAATCCTGACTCCC
CGTTATCGGATCACGTGCGTGACCCGACTCACTTGACCGAAGGTTACTTG
TCGGATGACCCAGCGCACGGGTCTGGTTCATCGAATCGGCGTTGCGAGAG
AAAGAAAGGTGTCCCATGGACAGAAGAGGAGCATCGCCTGTTTCTAATTG
GCCTTCAGAAATTAGGGAAGGGAGACTGGCGTGGTATAGCACGAAATTAT
GTCATGTCCAGGACTCCAACCCAGGTGGCAAGTCATGCTCAGAAGTATTT
TATCCGGCAGAGTAATGCTACTCGAAGAAAGAGGCGCTCCAGTCTTTTTG
ACATGGTTGCGGATGATATGGCCACAGATACCCCACTGGTGCCAGAAGAG
CAAATAATGCTT
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