CB293796

Overview
NameCB293796
Unique NameCB293796
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length766
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12029 contig Csv1_Contig12029:71..836. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB293796 vs. ExPASy Swiss-Prot
Match: F10AL_ARATH (FAM10 family protein At4g22670 OS=Arabidopsis thaliana GN=At4g22670 PE=1 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 6.303e-66
Identity = 140/243 (57.61%), Postives = 159/243 (65.43%), Query Frame = 2
Query:   56 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGK-SEPRA----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNP-SAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVLKKVEPNALRIEDH 766
            MD+ K+ ELK FIDQCKS+PS+L  PSLSFFRDYLESL AK+P   ++E K ++PR+                                     GD VE DNDPPQKMGDSS EVTD                +SEG  DEAIE  T AI LNP SAIMY  RASVYIK+KKPNAAIRDA AALEINPDSAKGYK+RGMA AMLG W EA  DLH+AS ID+DEEI+AVLKKVEPNA ++E+H
Sbjct:    1 MDSTKLSELKVFIDQCKSDPSLLTTPSLSFFRDYLESLGAKIPTGVHEEDKDTKPRSFVVEESDDDMDETEEVKPKVEEEEEEDEIVESDVELEGDTVEPDNDPPQKMGDSSVEVTDENREAAQEAKGKAMEALSEGNFDEAIEHLTRAITLNPTSAIMYGNRASVYIKLKKPNAAIRDANAALEINPDSAKGYKSRGMARAMLGEWAEAAKDLHLASTIDYDEEISAVLKKVEPNAHKLEEH 243          
BLAST of CB293796 vs. ExPASy Swiss-Prot
Match: F10A1_PONAB (Hsc70-interacting protein OS=Pongo abelii GN=ST13 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.941e-47
Identity = 101/238 (42.44%), Postives = 142/238 (59.66%), Query Frame = 2
Query:   56 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVLKKVEPNALRIEDH 766
            MD  KV EL+ F+  CK +PSVL    + F R+++ES+  KVPP A ++ KSE                                      ++E D D PQ+MGD +AE+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA HDL +A K+D+DE+ +A+LK+V+P A +I +H
Sbjct:    1 MDPRKVNELRAFVKMCKQDPSVLHTEEMRFLREWVESMGGKVPP-ATQKAKSEENTKEEKPDSKKVEEDLKADEPSSEESDLEIDKEG---VIEPDTDAPQEMGDENAEITEEMMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAMLKEVQPKAQKIAEH 234          
BLAST of CB293796 vs. ExPASy Swiss-Prot
Match: F10A1_HUMAN (Hsc70-interacting protein OS=Homo sapiens GN=ST13 PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.941e-47
Identity = 101/238 (42.44%), Postives = 142/238 (59.66%), Query Frame = 2
Query:   56 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVLKKVEPNALRIEDH 766
            MD  KV EL+ F+  CK +PSVL    + F R+++ES+  KVPP A ++ KSE                                      ++E D D PQ+MGD +AE+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA HDL +A K+D+DE+ +A+LK+V+P A +I +H
Sbjct:    1 MDPRKVNELRAFVKMCKQDPSVLHTEEMRFLREWVESMGGKVPP-ATQKAKSEENTKEEKPDSKKVEEDLKADEPSSEESDLEIDKEG---VIEPDTDAPQEMGDENAEITEEMMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAMLKEVQPRAQKIAEH 234          
BLAST of CB293796 vs. ExPASy Swiss-Prot
Match: F10A1_MOUSE (Hsc70-interacting protein OS=Mus musculus GN=St13 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.118e-46
Identity = 99/238 (41.60%), Postives = 141/238 (59.24%), Query Frame = 2
Query:   56 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVLKKVEPNALRIEDH 766
            MD  KV EL+ F+  C+ +PSVL    + F R+++ES+  KVPP  +K  KSE                                      ++E D D PQ+MGD +AE+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA HDL +A K+D+DE+ +A+L++V+P A +I +H
Sbjct:    1 MDPRKVSELRAFVKMCRQDPSVLHTEEMRFLREWVESMGGKVPPATHK-AKSEENTKEEKRDKTTEENIKTEELSSEESDLEIDNEG----VIEPDTDAPQEMGDENAEITEEMMDEANEKKGAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAMLREVQPRAQKIAEH 233          
BLAST of CB293796 vs. ExPASy Swiss-Prot
Match: F10A1_RAT (Hsc70-interacting protein OS=Rattus norvegicus GN=St13 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.490e-46
Identity = 99/238 (41.60%), Postives = 141/238 (59.24%), Query Frame = 2
Query:   56 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVLKKVEPNALRIEDH 766
            MD  KV EL+ F+  C+ +PSVL    + F R+++ES+  KVPP  +K  KSE                                      ++EAD D PQ+MGD +AE+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA  DL +A K+D+DE+ +A+L++V+P A +I +H
Sbjct:    1 MDPRKVSELRAFVKMCRQDPSVLHTEEMRFLREWVESMGGKVPPATHK-AKSEENTKEEKRDKTTEDNIKTEEPSSEESDLEIDNEG----VIEADTDAPQEMGDENAEITEAMMDEANEKKGAAIDALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAARDLALACKLDYDEDASAMLREVQPRAQKIAEH 233          
BLAST of CB293796 vs. ExPASy Swiss-Prot
Match: F10A5_HUMAN (Protein FAM10A5 OS=Homo sapiens GN=FAM10A5 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.252e-46
Identity = 99/238 (41.60%), Postives = 140/238 (58.82%), Query Frame = 2
Query:   56 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVLKKVEPNALRIEDH 766
            MD  KV EL+ F+  CK +PSVL    + F R+++ES+  KVPP A ++ KSE                                      ++E D D PQ+MGD + E+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAI+D   A+EINPDSA+ YK RG AH +LGHWEEA HDL  A K+D+DE+ +A+LK+V+P A +I +H
Sbjct:    1 MDPCKVNELRAFVKMCKQDPSVLHTEEMRFLREWVESMGGKVPP-ATQKAKSEENTKEEKPDSKKVEEDLKADEPSTEESDLEIDKEG---VIEPDTDAPQEMGDENVEITEEMMDQANDKKVAAIEVLNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIQDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLAFACKLDYDEDASAMLKEVQPRAQKIAEH 234          
BLAST of CB293796 vs. ExPASy Swiss-Prot
Match: F10A1_CHICK (Hsc70-interacting protein OS=Gallus gallus GN=ST13 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.614e-45
Identity = 99/245 (40.41%), Postives = 140/245 (57.14%), Query Frame = 2
Query:   56 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPP-------DAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVLKKVEPNALRIEDH 766
            MD+ K+ EL+ F+  CK NP +L    L F R+++ES+   +PP       D   +GK+E +                                    ++E DND PQ+MGD + EVT+                +SEG L +A+ L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A++INPDSA+ YK RG AH +LGHWEEA HDL +A K+D+DE+ +A+LK+V+P A +I +H
Sbjct:    1 MDSRKLGELRAFVRLCKQNPGLLHTEELGFLREWVESMGGTIPPAPASTSTDETSKGKAEEQPEEPVKSPEPESEESDLEIDNEG-------------VIEPDNDDPQEMGDENVEVTEEMMDQANEKKMEAINALSEGDLQKAVNLFTDAIKLNPCLAILYAKRASVFVKLQKPNAAIRDCDRAIKINPDSAQTYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAMLKEVQPRAQKIAEH 232          
BLAST of CB293796 vs. ExPASy Swiss-Prot
Match: F10A4_HUMAN (Protein FAM10A4 OS=Homo sapiens GN=FAM10A4 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.781e-44
Identity = 96/238 (40.34%), Postives = 137/238 (57.56%), Query Frame = 2
Query:   56 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPDAYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIMLNPS-AIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVLKKVEPNALRIEDH 766
            MD  KV EL+ F+  CK +PS+L    + F R+++ES+       A ++ KSE                                      ++E D D PQ+MGD +AE+T+                +++G+L +AI+L T+AI LNP  AI+YA RASV++K++KPNAAIRD   A+EINPDSA+ YK RG AH +LGHWEEA HDL +A K D+DE+ +A+LK+V+P A +I +H
Sbjct:    1 MDPRKVNELRAFVKMCKKDPSILHTQEMRFLREWVESMGGT----ATQKAKSEENTKEEKPDSKVEEDLKADEPSSEESDLEIDKEG----VIEPDTDAPQEMGDENAEITEEVMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKRRGKAHRLLGHWEEAAHDLALACKFDYDEDASAMLKEVQPRAQKIAEH 230          
BLAST of CB293796 vs. ExPASy Swiss-Prot
Match: HRP_PLABE (58 kDa phosphoprotein OS=Plasmodium berghei PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24
Identity = 75/256 (29.30%), Postives = 114/256 (44.53%), Query Frame = 2
Query:   56 MDAAKVKELKQFIDQCKSNPSVLADPSLSFFRDYLESLHAKVPPD--AYKEGKSEPRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIVEADNDPPQKMGDSSAEVTDXXXXXXXXXXXXXXXXISEGKLDEAIELSTEAIML--------------------NPSAIMYATRASVYIKMKKPNAAIRDATAALEINPDSAKGYKTRGMAHAMLGHWEEAVHDLHVASKIDFDEEIAAVLKKVEPNALRI 757
            MD  K+++LK+F+  C+ NPS+L  P LSFF+D++ES   K+  D   Y++ KSE                                        E ++D P+K+     E+                  +SE +++E  +L  EA+ L                    NPSA++Y  RAS+ + +K+P A IRD T AL +N DSA  YK R  A+  LG WE A  D+    KID+DE +  + K ++    +I
Sbjct:    1 MDIEKIEDLKKFVASCEENPSILLKPELSFFKDFIESFGGKIKKDKMGYEKMKSEDSTEEKSDEEEEDEEEEEE---------------------EEEDDDPEKL-----ELIKEEAVECPPLAPIIEGELSEEQIEEICKLKEEAVDLVENKKYEEALEKYNKIISFGNPSAMIYTKRASILLNLKRPKACIRDCTEALNLNVDSANAYKIRAKAYRYLGKWEFAHADMEQGQKIDYDENLWDMQKLIQEKYKKI 230          
The following BLAST results are available for this feature:
BLAST of CB293796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
F10AL_ARATH6.303e-6657.61FAM10 family protein At4g22670 OS=Arabidopsis thal... [more]
F10A1_PONAB2.941e-4742.44Hsc70-interacting protein OS=Pongo abelii GN=ST13 ... [more]
F10A1_HUMAN2.941e-4742.44Hsc70-interacting protein OS=Homo sapiens GN=ST13 ... [more]
F10A1_MOUSE1.118e-4641.60Hsc70-interacting protein OS=Mus musculus GN=St13 ... [more]
F10A1_RAT2.490e-4641.60Hsc70-interacting protein OS=Rattus norvegicus GN=... [more]
F10A5_HUMAN3.252e-4641.60Protein FAM10A5 OS=Homo sapiens GN=FAM10A5 PE=1 SV... [more]
F10A1_CHICK1.614e-4540.41Hsc70-interacting protein OS=Gallus gallus GN=ST13... [more]
F10A4_HUMAN6.781e-4440.34Protein FAM10A4 OS=Homo sapiens GN=FAM10A4 PE=1 SV... [more]
HRP_PLABE1.571e-2429.3058 kDa phosphoprotein OS=Plasmodium berghei PE=1 S... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_06ch03_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_06ch03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB293796 ID=CB293796; Name=CB293796; organism=Citrus sinensis; type=EST; length=766bp
GCACTAGGCCGTAATCTTCGAGAAGCTAAGAACCCTTGAACGAAGGGAGA
CGACGATGGACGCAGCAAAAGTGAAAGAACTGAAACAGTTCATCGATCAG
TGCAAATCCAACCCTTCCGTTCTCGCCGACCCCTCCCTCTCCTTCTTCCG
CGACTATCTCGAAAGTCTCCATGCGAAAGTGCCTCCCGATGCGTACAAAG
AAGGCAAATCCGAACCGAGGGCCTCTGTGGTGGAGGAGAGCGAAGAGGAA
GAACAAAGGGTAGAAGTAGAAGAAAAAGAGGAAGAAGAGGATGAAATAGT
CGAGTCCGATATTGAGCTTGAAGGAGATATTGTGGAGGCTGATAATGATC
CTCCTCAGAAGATGGGAGACAGTTCGGCAGAAGTTACTGATGAGAAACGC
GAAGCGGCTGCGGAGGCAAAGGCCAAGGCCATGGAAGCCATCTCTGAAGG
AAAGTTGGACGAGGCAATTGAGCTTTCGACTGAGGCTATTATGCTGAATC
CATCAGCCATTATGTATGCAACTAGAGCCAGTGTATACATCAAAATGAAG
AAGCCTAATGCTGCCATCCGGGATGCCACTGCAGCTTTAGAGATTAACCC
AGATTCTGCTAAGGGCTACAAGACCCGTGGCATGGCACATGCAATGCTAG
GTCACTGGGAGGAGGCTGTGCATGATCTTCATGTTGCTTCGAAGATAGAT
TTTGATGAAGAAATAGCTGCTGTACTTAAAAAGGTTGAACCCAATGCACT
GAGGATTGAAGACCAC
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