CB293806
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58 Identity = 112/217 (51.61%), Postives = 146/217 (67.28%), Query Frame = -2 Query: 159 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTDPGALVG--SGFL-DPVQKLCSGGRDNTVKVWK-LYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQW 794 IIWKE N W K H H SSVNS+ WAPH+ GL +ACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGG DN +K+W+ +G WK + L+ H DWVRDVAWAP++GLP TIAS S+DG+V IW G+ W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+VDGQW Sbjct: 84 IIWKEENGT-WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 224.172 bits (570), Expect = 6.648e-58 Identity = 112/217 (51.61%), Postives = 146/217 (67.28%), Query Frame = -2 Query: 159 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTDPGALVG--SGFL-DPVQKLCSGGRDNTVKVWK-LYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQW 794 IIWKE N W K H H SSVNS+ WAPH+ GL +ACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGG DN +K+W+ +G WK + L+ H DWVRDVAWAP++GLP TIAS S+DG+V IW G+ W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+VDGQW Sbjct: 84 IIWKEENGT-WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.299e-57 Identity = 112/217 (51.61%), Postives = 145/217 (66.82%), Query Frame = -2 Query: 159 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTDPGALVG--SGFL-DPVQKLCSGGRDNTVKVWK-LYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQW 794 IIWKE N W K H H SSVNS+ WAPH+ GL +ACGSSDG IS+ T G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGG DN +K+WK +G WK + L+ H DWVRDVAWAP++GLP TIAS S+DG+V +W G+ W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+VDGQW Sbjct: 84 IIWKEENGT-WEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 220.32 bits (560), Expect = 9.599e-57 Identity = 110/217 (50.69%), Postives = 145/217 (66.82%), Query Frame = -2 Query: 159 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTDPGALVG--SGFL-DPVQKLCSGGRDNTVKVWK-LYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQW 794 IIW+E N W K H H SSVNS+ WAPH+ GL +ACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + +++ SGG DN +K+WK +G WK + L+ H DWVRDVAWAP++GLP TIAS S+DG+V IW + W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+VDGQW Sbjct: 84 IIWREENGT-WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.102e-50 Identity = 99/218 (45.41%), Postives = 136/218 (62.39%), Query Frame = -2 Query: 150 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTDPGALVGSG---FLDPVQKLCSGGRDNTVKVWKLYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQV 794 I+WKE +N W H + H+ SVNSI WAPHE GL +AC SSDG++++ + W+ + Q +GV SVSW+P+ P +LV S P++++ +G DN +K++K W +D L+ H DWVRDVAWAPN+GLP IAS S+D VI+W E W GK L F V+RVSWS+ GNILAV+ G+N VTLW+E VD +W+ + Sbjct: 82 IVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSDGSVTIHNYN-NNVWEAPQKIQVSQIGVNSVSWSPAAIPTSLVNSANTIIPAPIKRIVTGSCDNLIKIFKNVEDKWILD--KQLEDHKDWVRDVAWAPNIGLPYSKIASCSQDRSVIVW-TQDENGVWSGKPLPKFDDIVWRVSWSVIGNILAVSCGDNQVTLWKEGVDSEWKLI 295
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: SEC13_CHAGB (Protein transport protein SEC13 OS=Chaetomium globosum GN=SEC13 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.698e-45 Identity = 102/224 (45.54%), Postives = 140/224 (62.50%), Query Frame = -2 Query: 141 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTDPGALVGSGFLDPV---QKLCSGGRDNTVKVWKL--YNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQVIAV 794 +IW+E N W + + F HK+SVN + W+PHE G +AC SSDGN+SV + + W+ S I AH +GV SVSWAP+T+PG++V S ++ +GG DN +K+W G +K++ P L H DWVRDVAW+P + L K IASASED V IW QW KVL F V+RVSWSL+GN+LA + G+N VTLW+E + G+W+ V ++ Sbjct: 70 LIWREQNG-AWQRIYDFSLHKASVNVVSWSPHEAGCVLACASSDGNVSVLEFKDNNSWEHS-IFHAHGLGVNSVSWAPATNPGSIVSSKPSPKSTGNRRFVTGGSDNALKIWAFDAATGAYKLEREP-LTGHTDWVRDVAWSPTV-LQKSYIASASEDRTVRIWTSDPANPQQWNCKVL-GFDAAVWRVSWSLSGNVLAASGGDNKVTLWKENLKGEWECVKSI 288
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: SEC13_USTMA (Protein transport protein SEC13 OS=Ustilago maydis GN=SEC13 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.438e-44 Identity = 98/229 (42.79%), Postives = 131/229 (57.21%), Query Frame = -2 Query: 150 IKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTDPGALV------------GSGFLDPVQKLCSGGRDNTVKVWKLYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPVAREGDQWEGKVL-------------HDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQV 761 IK+H H +SVNSI WAPHELG +AC SSDGN+SV T DG W + AHPVG +VSWAP+ PG+L+ +G V++ S G DNTVK+W+ + ALQ H DWVRDVA+APN+GLP+ +A+AS+D V+IW W L + F V+RVSWS++GN+LAV+ G+ +TLW+E + G W+ V Sbjct: 134 IKEHTL--HTASVNSISWAPHELGSILACASSDGNVSVLTFNNDGTWAVDLV-AAHPVGCNAVSWAPAVVPGSLISAQSVGANAGAASNGEAKLVKRFASAGCDNTVKIWEFSQEANRFVEVEALQGHSDWVRDVAFAPNVGLPRSYLATASQDRTVLIWTQDSPTAAWSKTALNPISASAAAGAGSNKFPDTVWRVSWSVSGNVLAVSCGDGKITLWKENLKGAWECV 359
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: SEC13_EMENI (Protein transport protein sec13 OS=Emericella nidulans GN=sec13 PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.464e-44 Identity = 99/225 (44.00%), Postives = 136/225 (60.44%), Query Frame = -2 Query: 150 IIWKEGN--------SNEWIKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTDPGALVGSG-FLDPVQKLCSGGRDNTVKVWKLYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQV 794 +IW+E + S W K F H +SVN I WAPHE G +AC SSDG++SV R D W T +I AH +GV S+SWAP+ PG+LV S + ++ +GG DN +K+W + L+ H DWVRDVAW+P++ L K IASAS+D V +W A QW +VL +F ++RVSWS +GNILAV+ G+N V+LW+E + GQW++V Sbjct: 84 LIWREQHQSSTAPIGSGAWTKVFDFSLHTASVNMISWAPHETGCLLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAASPGSLVSSNPGIGQQRRFVTGGSDNLLKIWDYNPETKTYNATQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRVWTADASNPGQWTSQVL-EFDNVLWRVSWSPSGNILAVSGGDNKVSLWKENLRGQWEKV 304
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: SEC13_NEUCR (Protein transport protein sec-13 OS=Neurospora crassa GN=sec-13 PE=3 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 3.541e-43 Identity = 101/222 (45.50%), Postives = 139/222 (62.61%), Query Frame = -2 Query: 150 IIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTDPGALVGSG---FLDPVQKLCSGGRDNTVKVWKL---YNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQV 794 +IW+E + W + F HK+SVN + W+PHE G +AC SSDGN+SV + D W+ + I AH +GV SVSWAP+T PG++V S ++ +GG DN +K+W NG +K++ P L H DWVRDVAW+P + L K IASAS+D V IW A +W+ KVL+ F V+RVSWSL+GN+LA + NN VTLW+E + G+W+ V Sbjct: 85 LIWRE-QAGSWQRIFDFALHKASVNIVSWSPHEAGCLLACASSDGNVSVLEFK-DNSWEHN-IFHAHGLGVNSVSWAPATTPGSIVSSNPGPGSTGNRRFVTGGSDNLLKIWTFDPATNG-YKLEREP-LAGHTDWVRDVAWSPTV-LQKSYIASASQDKTVRIWTSDAANPGEWKCKVLN-FDAAVWRVSWSLSGNVLAASSDNNKVTLWKENLKGEWENV 299
BLAST of CB293806 vs. ExPASy Swiss-Prot
Match: SEC13_ASPFU (Protein transport protein sec13 OS=Aspergillus fumigatus GN=sec13 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.625e-43 Identity = 99/225 (44.00%), Postives = 135/225 (60.00%), Query Frame = -2 Query: 150 IIWKEGNSNE--------WIKDHVFEDHKSSVNSIDWAPHELGLCMACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTDPGALVGSGFLDPVQK-LCSGGRDNTVKVWKLYNGIWKMDCFPALQMHIDWVRDVAWAPNLGLPKFTIASASEDGKVIIWPV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGQWQQV 794 +IW+E + N W K F H +SVN + WAPHE G +AC SSDG++SV R D W T +I AH +GV S+SWAP+ PG+L+ S Q+ +GG DN +K+W + L+ H DWVRDVAW+P++ L K IASAS+D V IW A QW + L +F T ++RVSWS +GNILAV+ G+N V+LW+E + GQW++V Sbjct: 81 LIWREQHQNATSPVAGSTWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAASPGSLISSNPGPGQQRRFVTGGSDNLLKIWDYNPESKTYNLSQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRIWTSDASNPGQWTSQQL-EFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKV 301 The following BLAST results are available for this feature:
BLAST of CB293806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CB293806 ID=CB293806; Name=CB293806; organism=Citrus sinensis; type=EST; length=795bpback to top |